FFCP PHASE1:Hg19::chr1:227505905..227505906,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:227505905..227505906,- to FFCP PHASE1:Hg19::chr1:227505905..227505906,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8476 | |EntrezGene=8476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1737 | |HGNC=1737 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEF7,Q5VT25 | |UniProt=E9PEF7,Q5VT25 | ||
|association_with_transcript=-79bp_to_ENST00000334218,ENST00000366762,ENST00000366764,ENST00000366766,NM_003607,NM_014826,uc001hqr.2,uc001hqs.2,uc009xes.2,uc010pvs.1_5end | |||
|cluster_id=chr1:227505905..227505906,- | |||
|description=CAGE_peak_43_at_CDC42BPA_5end | |||
|id=chr1:227505905..227505906,- | |||
|ontology_enrichment_celltype=CL:0000039!7.92e-07!7;CL:0000586!7.92e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.55e-98;1!CL:0002625;1.55e-98;1!CL:0000216;1.55e-98;1!CL:0000154;8.34e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.37e-99,1;CL:0002625,9.37e-99,1;CL:0000216,9.37e-99,1;CL:0000154,7.67e-18,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!2.53e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-15!115;UBERON:0003135!1.12e-09!11;UBERON:0000473!1.57e-09!8;UBERON:0003101!1.83e-09!22;UBERON:0000079!1.83e-09!22;UBERON:0000991!4.18e-08!21;UBERON:0009196!4.18e-08!21;UBERON:0009117!4.18e-08!21;UBERON:0005564!4.18e-08!21;UBERON:0004176!1.13e-07!22;UBERON:0005156!9.18e-07!59;UBERON:0000990!9.18e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.55e-98;1!UBERON:0001343;1.55e-98;1!UBERON:0004910;1.55e-98;1!UBERON:0004813;1.55e-98;1!UBERON:0004909;3.52e-50;2!UBERON:0005904;6.30e-26;4!UBERON:0000473;1.00e-13;8!UBERON:0001155;2.31e-12;9!UBERON:0000058;2.87e-11;10!UBERON:0003135;2.27e-10;11!UBERON:0000059;2.27e-10;11!UBERON:0000160;7.39e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.37e-99,1;UBERON:0001343,9.37e-99,1;UBERON:0004910,9.37e-99,1;UBERON:0005154,9.37e-99,1;UBERON:0005295,9.37e-99,1;UBERON:0004813,9.37e-99,1;UBERON:0005297,9.37e-99,1;UBERON:0005294,9.37e-99,1;UBERON:0010141,9.37e-99,1;UBERON:0005891,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0005904,5.56e-26,4;UBERON:0000473,9.39e-14,8;UBERON:0004871,9.39e-14,8;UBERON:0001155,2.45e-12,9;UBERON:0003135,2.16e-10,11;UBERON:0004876,2.16e-10,11;UBERON:0000059,2.37e-10,11;UBERON:0004122,5.55e-08,15;UBERON:0000160,7.60e-07,17 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0.22589216407792,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0.22589216407792,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p43@CDC42BPA | |||
}} | }} |
Latest revision as of 02:35, 16 September 2015
Short description: | p43@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000334218, ENST00000366762, ENST00000366764, ENST00000366766, NM_003607, NM_014826, uc001hqr.2, uc001hqs.2, uc009xes.2, uc010pvs.1_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | E9PEF7Q5VT25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.37e-99 | 1 |
seminiferous tubule epithelial cell | 9.37e-99 | 1 |
Sertoli cell | 9.37e-99 | 1 |
protein secreting cell | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.37e-99 | 1 |
seminiferous tubule of testis | 9.37e-99 | 1 |
epithelium of male gonad | 9.37e-99 | 1 |
epithelial cord | 9.37e-99 | 1 |
sex cord | 9.37e-99 | 1 |
seminiferous tubule epithelium | 9.37e-99 | 1 |
testis sex cord | 9.37e-99 | 1 |
genital ridge | 9.37e-99 | 1 |
primitive sex cord of indifferent gonad | 9.37e-99 | 1 |
coelomic epithelium | 9.37e-99 | 1 |
epithelium of gonad | 2.74e-50 | 2 |
duct of male reproductive system | 5.56e-26 | 4 |
testis | 9.39e-14 | 8 |
somatic layer of lateral plate mesoderm | 9.39e-14 | 8 |
colon | 2.45e-12 | 9 |
male reproductive organ | 2.16e-10 | 11 |
urogenital ridge | 2.16e-10 | 11 |
large intestine | 2.37e-10 | 11 |
genitourinary system | 5.55e-08 | 15 |
intestine | 7.60e-07 | 17 |