FFCP PHASE1:Hg19::chr1:209826396..209826431,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:209826396..209826431,- to FFCP PHASE1:Hg19::chr1:209826396..209826431,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209826396..209826431,- | |||
|coexpression_cluster_id=C2562 | |||
|description=CAGE_peak_at_chr1:209826396..209826431,- | |||
|id=chr1:209826396..209826431,- | |||
|ontology_enrichment_celltype=CL:0000066!9.30e-36!254;CL:0002076!7.59e-25!43;CL:0000223!1.25e-18!59;CL:0002368!3.47e-12!13;CL:0002251!2.10e-09!21;CL:0002159!6.70e-09!13;CL:0002202!7.91e-09!9;CL:0002632!7.91e-09!9;CL:0002077!1.60e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.18e-26;42!CL:0002368;3.35e-16;13!CL:0002251;2.92e-14;20!CL:0002202;1.38e-11;9!CL:0002632;1.38e-11;9!CL:0002159;1.47e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.88e-40,253;CL:0002076,1.58e-34,42;CL:0000223,6.09e-25,58;CL:0002368,3.38e-16,13;CL:0002251,3.56e-14,20;CL:0002202,1.42e-11,9;CL:0002632,1.42e-11,9;CL:0002159,1.47e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000223;3.27e-13;58!UBERON:0008947;1.61e-07;29!UBERON:0006595;4.46e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.68e-21!106;DOID:0050687!1.85e-15!143;DOID:1749!2.44e-09!14;DOID:299!4.68e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.52e-12;14!DOID:299;1.04e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.55e-24,106;DOID:0050687,3.33e-14,143;DOID:1749,1.56e-12,14;DOID:299,1.10e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.81e-20!169;UBERON:0000925!1.81e-20!169;UBERON:0006595!1.81e-20!169;UBERON:0001007!2.08e-14!155;UBERON:0001555!2.08e-14!155;UBERON:0007026!2.08e-14!155;UBERON:0001004!2.36e-13!72;UBERON:0004921!1.19e-12!129;UBERON:0004185!1.19e-12!129;UBERON:0000065!2.40e-12!53;UBERON:0000077!8.08e-12!130;UBERON:0008947!1.88e-10!38;UBERON:0003258!1.88e-10!38;UBERON:0000062!2.43e-10!511;UBERON:0000072!6.58e-09!46;UBERON:0006554!1.05e-08!44;UBERON:0005911!1.29e-08!82;UBERON:0001008!2.73e-08!45;UBERON:0001041!3.22e-08!98;UBERON:0000464!5.75e-08!104;UBERON:0005153!7.14e-08!37;UBERON:0005156!1.69e-07!59;UBERON:0000990!1.69e-07!59;UBERON:0005631!2.88e-07!14;UBERON:0000158!2.88e-07!14;UBERON:0000466!6.85e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;8.96e-11;44!UBERON:0006554;2.56e-10;30!UBERON:0001008;2.56e-10;30!UBERON:0001004;1.00e-09;65!UBERON:0000072;7.07e-09;37!UBERON:0005911;1.70e-08;36!UBERON:0004921;4.20e-08;33!UBERON:0004807;4.47e-08;22!UBERON:0000344;5.51e-08;20!UBERON:0000365;1.36e-07;5!UBERON:0007196;3.73e-07;15!UBERON:0001558;3.73e-07;15!UBERON:0001737;4.77e-07;9!UBERON:0001557;4.77e-07;9!UBERON:0005178;7.02e-07;34!UBERON:0002224;7.02e-07;34!UBERON:0000486;8.35e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.01e-28,160;UBERON:0000925,5.01e-28,160;UBERON:0006595,5.01e-28,160;UBERON:0001007,3.48e-20,145;UBERON:0001555,3.48e-20,145;UBERON:0007026,3.48e-20,145;UBERON:0004921,8.08e-18,118;UBERON:0006554,3.57e-16,47;UBERON:0001004,1.18e-15,74;UBERON:0001008,1.28e-15,48;UBERON:0000065,3.52e-13,54;UBERON:0008947,2.12e-12,38;UBERON:0003258,2.12e-12,38;UBERON:0001041,6.05e-11,87;UBERON:0005911,8.07e-11,82;UBERON:0005153,9.88e-10,37;UBERON:0000072,1.37e-09,47;UBERON:0005631,1.34e-08,14;UBERON:0000158,1.34e-08,14;UBERON:0005177,1.39e-08,101;UBERON:0000161,2.76e-08,36;UBERON:0005157,3.40e-08,47;UBERON:0000344,5.63e-08,20;UBERON:0000365,1.34e-07,5;UBERON:0005178,1.44e-07,34;UBERON:0002224,1.44e-07,34;UBERON:0005423,2.72e-07,581;UBERON:0005181,3.35e-07,35;UBERON:0007196,3.89e-07,15;UBERON:0001558,3.89e-07,15;UBERON:0005156,4.41e-07,59;UBERON:0000990,4.41e-07,59;UBERON:0001737,4.94e-07,9;UBERON:0002113,8.79e-07,26;UBERON:0003918,8.79e-07,26;UBERON:0011143,8.79e-07,26;UBERON:0005095,8.79e-07,26;UBERON:0007687,8.79e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,8.60068777755281,14.653824527421,20.9703717244965,29.5419015615868,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.764134057479513,0.164201178899891,0.472264687882075,0.393364276848904,0,0,74.4731191827931,70.4821849941105,96.8755506636984,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,1.54853185447552,0,0,1.18241114944293,0,0.645484683583826,1.35426486594342,0,0.272906150057846,2.24723484445085,1.22433556948361,0,1.27867425159808,0,0,0,0.580418477257168,0.56738522469114,1.86846674698672,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0.949387162322653,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,1.32348744029695,0.221729397462564,0.43917392846563,0.589405839739707,75.4091246765562,22.2470665670658,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,6.58902087180316,11.6334079244498,35.3236182235453,0,0,0,0,0.354668382198357,1.68203280042692,0,2.4666754841716,0.311211035399766,0,0,1.36221684880438,4.60940739583999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,125.42629370298,118.644562457013,96.6531486460943,0.121973706129595,0,0.464775771478074,0.829288440122964,0,0,0,0,0,0,0,2.24782920075703,3.20310911148393,2.41011029883482,2.86764329104224,1.30727666455444,2.84724742933316,2.02246962240247,1.56977172100277,2.30848294167834,0,0,0,0,0,0,0,0,14.8816010637167,0.171567810298526,117.213304816412,92.169437671248,91.5818938669957,74.6262867977749,0,0,0,0.579652024875384,0,0,0,0,0.790204397959275,0,0,0,0,42.1802252940496,77.2717789714754,52.1732357851982,51.5857090768406,36.9105101912732,108.11391552459,0,0,0.207328115540772,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,1.34557301214433,0,1.10007428731425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,2.99602809578873,2.99161459204025,4.14415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0.468565659970853,0,0,2.0694614258501,0,0.368738337083406,0.0868836144680828,3.91602314925481,1.37257369524342,0,0,0,16.9751440009905,18.3078983461547,4.23346410661552,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0,0.519254429183621,0,9.06445871937167,66.9691610812971,48.5266811692174,0,0,0,11.7311899355927,7.23944168781499,4.70609861506113,2.92278449306521,8.2330270536443,0,0.340187410553031,0,0,0,0,27.0168849427741,44.0470284732224,7.61174166055406,0,0.261435451024901,0,0,0,0.103041011647722,0,0,27.5647458238163,26.6524700874974,0,0,0,0,0,0,0,0,0,69.7502342823328,52.6600784580391,77.333303771718,24.6824985287542,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,65.4310366533482,75.0738548600082,69.6902303112465,0.753150406214233,123.985547329314,75.8121640504315,127.707884218563,257.290208231795,0,0,0,0,0,0,0,0,0,0,26.4643433259514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11134053551235,0.146508179271894,0,0.334330152832435,12.2178543126758,65.4159888181271,3.56357616999166,41.7738554854956,0,0,1.22439575525196,0,0,0.597743964753209,1.10513566212459,0.251932747854276,0.102268682502155,0,0,14.9181462904563,10.3832281311853,0,1.7755813014648,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,5.57587896598948,18.3062628210792,0.945550727071745,0,0.291604613383254,0,0,0,0,0,0,0,0,8.22600091243759,0.923403102045565,0,0.69169171316418,0.179515288819544,0.434589487688032,24.2440881396259,0.915975934018623,10.6606955203727,0,0,0,0,0,0,0,0,11.1828974199854,11.099830954822,12.4390702861868,0,6.96683351754953,6.89969003126046,5.49927130440263,0,0,0.104421949505455,0,0,0,0,5.6742739490306,0.242780379534093,8.2862724598372,3.62972148145992,0,0.063186579628488,1.65355761355942,1.65901106235595,0,0,0,0,10.2459436570725,0.416024019039416,4.16543372004314,7.34942980607832,9.31533510410307,1.92199335066233,0,2.32215195093804,4.31226970808495,2.6276946257027,1.64881328030313,0,0,21.5155821695399,2.18586072873289,0,13.1019426432318,17.715099275589,2.13452994739353,2.39771531498556,9.6540579493251,0,0,15.2698085867439,0,9.66345541928861,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,0,0,0,16.198120191708,9.2856234546954,0,9.39217125277945,2.83700546277113,1.20645552710496,2.42880773994635,0,7.86852309009726,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0.170388021785422,0.339936274560377,1.75862680413699,0,0,0,1.53978154095896,2.81926008926669,1.06787412567695,1.88645166119599,0.828478110694391,0,0,0,32.5554041462793,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,9.24855018919589,0,0,25.6439743471007,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,1.24210365501008,0,0,0,0,0,1.220612199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| ||
|short_description=p@chr1:209826396..209826431,- | |||
}} | }} |
Latest revision as of 03:21, 28 July 2015
Short description: | p@chr1:209826396..209826431, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209826396..209826431, - |
Coexpression cluster: | C2562_Urothelial_Gingival_Keratinocyte_Mammary_Bronchial_Small_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.88e-40 | 253 |
endo-epithelial cell | 1.58e-34 | 42 |
endodermal cell | 6.09e-25 | 58 |
respiratory epithelial cell | 3.38e-16 | 13 |
epithelial cell of alimentary canal | 3.56e-14 | 20 |
epithelial cell of tracheobronchial tree | 1.42e-11 | 9 |
epithelial cell of lower respiratory tract | 1.42e-11 | 9 |
general ecto-epithelial cell | 1.47e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.55e-24 | 106 |
cell type cancer | 3.33e-14 | 143 |
squamous cell carcinoma | 1.56e-12 | 14 |
adenocarcinoma | 1.10e-08 | 25 |