FFCP PHASE1:Hg19::chr1:18958008..18958023,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:18958008..18958023,+ to FFCP PHASE1:Hg19::chr1:18958008..18958023,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5081 | |EntrezGene=5081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8621 | |HGNC=8621 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFV9 | |UniProt=E9PFV9 | ||
|association_with_transcript=0bp_to_ENST00000400661,ENST00000420770_5end | |||
|cluster_id=chr1:18958008..18958023,+ | |||
|coexpression_cluster_id=C3915 | |||
|description=CAGE_peak_2_at_PAX7_5end | |||
|id=chr1:18958008..18958023,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.60e-08;2!UBERON:0010056;8.60e-08;2 | |||
|ontology_enrichment_disease=DOID:171!1.71e-15!10;DOID:3095!6.85e-07!22;DOID:2994!6.85e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;2.04e-33;10!DOID:3095;3.11e-15;22!DOID:2994;3.11e-15;22!DOID:3193;4.38e-08;2!DOID:962;4.38e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.97e-33,10;DOID:3095,3.07e-15,22;DOID:2994,3.07e-15,22;DOID:3193,4.38e-08,2;DOID:962,4.38e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001630!3.67e-13!2;UBERON:0005090!3.67e-13!2;UBERON:0000341!5.28e-13!2;UBERON:0001723!3.77e-09!3;UBERON:0001033!3.77e-09!3;UBERON:0010056!3.77e-09!3;UBERON:0003978!1.14e-08!3;UBERON:0009751!1.14e-08!3;UBERON:0000946!1.14e-08!3;UBERON:0002523!1.14e-08!3;UBERON:0005983!1.14e-08!3;UBERON:0002165!1.14e-08!3;UBERON:0002062!1.14e-08!3;UBERON:0007280!1.14e-08!3;UBERON:0002426!1.74e-07!1;UBERON:0003831!1.74e-07!1;UBERON:0003898!1.74e-07!1;UBERON:0004830!1.74e-07!1;UBERON:0001774!1.74e-07!1;UBERON:0003830!1.74e-07!1;UBERON:0005175!1.74e-07!1;UBERON:0003897!1.74e-07!1;UBERON:0001103!1.74e-07!1;UBERON:0010084!1.74e-07!1;UBERON:0005418!2.37e-07!1;UBERON:0001389!2.37e-07!1;UBERON:0000026!2.37e-07!1;UBERON:0008784!2.37e-07!1;UBERON:0006058!2.37e-07!1;UBERON:0003663!2.37e-07!1;UBERON:0001383!2.37e-07!1;UBERON:0004256!2.37e-07!1;UBERON:0002529!2.37e-07!1;UBERON:0004708!2.37e-07!1;UBERON:0002101!2.37e-07!1;UBERON:0004709!2.37e-07!1;UBERON:0003661!2.37e-07!1;UBERON:0002471!2.37e-07!1;UBERON:0004357!2.37e-07!1;UBERON:0009872!2.37e-07!1;UBERON:0004347!2.37e-07!1;UBERON:0005420!2.37e-07!1;UBERON:0005732!2.37e-07!1;UBERON:0006057!2.37e-07!1;UBERON:0000978!2.37e-07!1;UBERON:0002103!2.37e-07!1;UBERON:0001665!2.37e-07!1;UBERON:0003823!2.37e-07!1;UBERON:0000154!2.37e-07!1;UBERON:0005733!2.37e-07!1;UBERON:0005730!2.37e-07!1;UBERON:0000989!2.52e-07!1;UBERON:0008811!2.52e-07!1;UBERON:0006258!2.52e-07!1;UBERON:0005876!2.52e-07!1;UBERON:0004874!2.52e-07!1;UBERON:0002135!3.41e-07!1;UBERON:0007029!3.62e-07!1;UBERON:0002146!4.89e-07!1;UBERON:0005623!4.89e-07!1;UBERON:0001301!5.84e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.48e-53;4!UBERON:0000923;1.48e-53;4!UBERON:0010316;1.48e-53;4!UBERON:0005291;1.48e-53;4!UBERON:0002050;5.91e-43;5!UBERON:0005423;5.91e-43;5!UBERON:0005090;6.10e-27;2!UBERON:0001630;6.10e-27;2!UBERON:0001723;1.70e-18;3!UBERON:0001033;1.70e-18;3!UBERON:0002426;1.84e-14;1!UBERON:0003831;1.84e-14;1!UBERON:0003898;1.84e-14;1!UBERON:0004830;1.84e-14;1!UBERON:0003830;1.84e-14;1!UBERON:0005175;1.84e-14;1!UBERON:0001774;1.84e-14;1!UBERON:0001103;1.84e-14;1!UBERON:0001389;2.75e-14;1!UBERON:0000026;2.75e-14;1!UBERON:0008784;2.75e-14;1!UBERON:0006058;2.75e-14;1!UBERON:0003663;2.75e-14;1!UBERON:0004256;2.75e-14;1!UBERON:0004708;2.75e-14;1!UBERON:0002101;2.75e-14;1!UBERON:0004709;2.75e-14;1!UBERON:0002529;2.75e-14;1!UBERON:0010538;2.75e-14;1!UBERON:0003661;2.75e-14;1!UBERON:0010890;2.75e-14;1!UBERON:0002471;2.75e-14;1!UBERON:0001383;2.75e-14;1!UBERON:0010758;2.75e-14;1!UBERON:0010707;2.75e-14;1!UBERON:0000978;2.75e-14;1!UBERON:0002103;2.75e-14;1!UBERON:0001665;2.75e-14;1!UBERON:0003823;2.75e-14;1!UBERON:0000154;2.75e-14;1!UBERON:0010709;2.75e-14;1!UBERON:0001134;1.81e-13;16!UBERON:0002036;1.81e-13;16!UBERON:0000922;2.31e-09;49!UBERON:0003714;4.38e-08;2!UBERON:0000341;7.03e-08;2!UBERON:0002385;5.16e-07;31!UBERON:0001015;5.16e-07;31!UBERON:0000383;5.16e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.10e-27,2;UBERON:0001630,6.10e-27,2;UBERON:0001723,1.62e-18,3;UBERON:0001033,1.62e-18,3;UBERON:0010056,1.62e-18,3;UBERON:0002426,1.61e-14,1;UBERON:0003831,1.61e-14,1;UBERON:0003898,1.61e-14,1;UBERON:0004830,1.61e-14,1;UBERON:0003830,1.61e-14,1;UBERON:0005175,1.61e-14,1;UBERON:0001774,1.61e-14,1;UBERON:0001103,1.61e-14,1;UBERON:0010084,1.61e-14,1;UBERON:0005418,3.15e-14,1;UBERON:0001389,3.15e-14,1;UBERON:0000026,3.15e-14,1;UBERON:0008784,3.15e-14,1;UBERON:0006058,3.15e-14,1;UBERON:0003663,3.15e-14,1;UBERON:0004256,3.15e-14,1;UBERON:0004708,3.15e-14,1;UBERON:0002101,3.15e-14,1;UBERON:0004709,3.15e-14,1;UBERON:0002529,3.15e-14,1;UBERON:0010538,3.15e-14,1;UBERON:0003661,3.15e-14,1;UBERON:0010890,3.15e-14,1;UBERON:0002471,3.15e-14,1;UBERON:0001383,3.15e-14,1;UBERON:0004357,3.15e-14,1;UBERON:0004347,3.15e-14,1;UBERON:0005420,3.15e-14,1;UBERON:0005732,3.15e-14,1;UBERON:0010758,3.15e-14,1;UBERON:0010707,3.15e-14,1;UBERON:0000978,3.15e-14,1;UBERON:0002103,3.15e-14,1;UBERON:0001665,3.15e-14,1;UBERON:0003823,3.15e-14,1;UBERON:0000154,3.15e-14,1;UBERON:0010709,3.15e-14,1;UBERON:0005733,3.15e-14,1;UBERON:0005730,3.15e-14,1;UBERON:0003714,4.38e-08,2;UBERON:0000341,7.52e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870036464629098,0,0,0,0,0,0.255679882248303,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37406920074882,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5969975760462,17.431143448338,6.07285244869111,9.49696360554514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,1.75871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,8.86677188743155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.923965261706223,10.4383298820438,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20646155237509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,2.14257988317366,0,0,0,0,0.404234377916439,1.30630048738177,6.16019941953506,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870036464629098,0,0,0,0,0,0.255679882248303,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37406920074882,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5969975760462,17.431143448338,6.07285244869111,9.49696360554514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,1.75871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,8.86677188743155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.923965261706223,10.4383298820438,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20646155237509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,2.14257988317366,0,0,0,0,0.404234377916439,1.30630048738177,6.16019941953506,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@PAX7 | |||
}} | }} |
Latest revision as of 09:09, 19 September 2015
Short description: | p2@PAX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAX7_5end |
Coexpression cluster: | C3915_neuroectodermal_skeletal_neuroepithelioma_rhabdomyosarcoma_synovial_carcinoid_tongue |
Association with transcript: | 0bp_to_ENST00000400661, ENST00000420770_5end |
EntrezGene: | PAX7 |
HGNC: | 8621 |
UniProt: | E9PFV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.97e-33 | 10 |
germ cell and embryonal cancer | 3.07e-15 | 22 |
germ cell cancer | 3.07e-15 | 22 |
peripheral nerve sheath neoplasm | 4.38e-08 | 2 |
neurofibroma | 4.38e-08 | 2 |