FFCP PHASE1:Hg19::chr1:174844645..174844672,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:174844645..174844672,+ to FFCP PHASE1:Hg19::chr1:174844645..174844672,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=Q5R372 | |UniProt=Q5R372 | ||
|association_with_transcript=0bp_to_NM_001035230_5end | |||
|cluster_id=chr1:174844645..174844672,+ | |||
|description=CAGE_peak_9_at_RABGAP1L_5end | |||
|id=chr1:174844645..174844672,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.02e-10!18;CL:0000789!2.02e-10!18;CL:0002420!2.02e-10!18;CL:0002419!2.02e-10!18;CL:0000790!2.02e-10!18;CL:0002322!2.54e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.44e-12;18!CL:0000789;3.44e-12;18!CL:0002419;3.44e-12;18!CL:0002322;1.78e-10;5!CL:0000625;3.80e-08;11!CL:0000084;5.99e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.38e-12,18;CL:0000789,2.38e-12,18;CL:0002420,2.38e-12,18;CL:0002419,2.38e-12,18;CL:0000790,2.38e-12,18;CL:0002322,1.76e-10,5;CL:0000625,3.05e-08,11;CL:0000084,4.69e-08,25;CL:0000827,4.69e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.44e-12;18 | |||
|ontology_enrichment_disease=DOID:305!6.98e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.38e-12!115;UBERON:0004921!7.99e-10!129;UBERON:0004185!7.99e-10!129;UBERON:0001007!1.75e-08!155;UBERON:0001555!1.75e-08!155;UBERON:0007026!1.75e-08!155;UBERON:0004119!4.02e-08!169;UBERON:0000925!4.02e-08!169;UBERON:0006595!4.02e-08!169;UBERON:0000077!4.54e-07!130;UBERON:0005409!9.13e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.66e-10;33!UBERON:0005409;1.50e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.83e-10,118;UBERON:0005409,9.51e-08,25;UBERON:0001007,1.04e-07,145;UBERON:0001555,1.04e-07,145;UBERON:0007026,1.04e-07,145;UBERON:0001041,9.54e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0,0,0.46480320348181,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37696839079683,0.786021525498329,1.85041349099558,0.167186495390678,1.62961133316795,0.946895611469467,0,3.56513462032555,3.24066498222321,7.97522020501036,4.87446954777028,1.5370958367081,2.08094956095805,0.328875809207352,0,0.289803085735052,0.593146252648242,0,1.04535523804977,1.92625882585863,3.83220493601921,4.12352934579156,7.33757106856558,2.86708872891687,1.30216690771284,2.85135613334512,1.95747654801105,1.53583933385302,2.49861453104692,3.07810427657222,1.64225599384209,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8072391436075,23.1927094562599,13.5946913157337,5.49403591581463,17.4101387104184,16.0590037993365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.308061348417659,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0.229723400206959,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,1.23408681925858,0,0.540031437238115,0.79312517629427,0,0,7.35120647943095,3.71606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0,0,19.0995587790152,5.64232893582013,4.91457123358771,0,0,0,0,0,0.996239941255349,3.31540698637377,24.4374765418648,0,0,0,4.673154259661,0.358042349351218,0,1.57829449019094,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,1.0241410345695,15.255219017566,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,1.15425387755696,0,0,2.42345639906385,0.325942115766024,3.50901275705111,0.183195186803725,0,0,0,0,0,0,0,0,0,0,4.08082020397869,0,0.216388639742091,0.995261931078505,6.72277490225378,7.33236173920351,0,0,0,0.134802265961354,0,0,8.94028467156763,3.7176277597097,0,11.4429476826323,12.0990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,11.975621945124,1.46988596121566,0.0870592065804026,3.14508002835654,0,0,0,0,1.93978032976839,0,0.677942222341597,0,0,0,1.36885967914362,0.0801588202515337,10.2457437474889,0,21.4694721559618,0,1.20116498503375,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,14.1772090354284,0,0,0,0,0,0,0,0,0.492137407573744,2.03215996957883,0,0.136203406111576,8.84142316557605,10.7280760545842,14.1249714929923,0,0,0,0,1.26089131678717,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,33.8311210712003,10.2515916064987,34.5849471219265,19.8834746566654,0,2.76656284657122,0,0.638341257770182,0,0,0,0,12.5643277000187,0,0,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,3.27834434064817,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.88332946650923,0,0,0,0,0,0,1.42899623863589,0,19.5378502808273,0,0,7.68851648328635,0,0,0,0,0,23.5750839748588,0.992422356778588,0,2.29972369751271,0,0,10.3184152720227,20.7172594129681,0.266107110487916,0.115233987555779,0,0,0,0,0.778619813244484,2.98273752831953,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,14.6277301998894,0,0,5.08064460229115,3.43660302816075,0,0,0.223710863595585,2.45375584038107,56.569917191773,0,0,0,3.39997695141398,10.995154782719,0,0,19.4267261107011,0,10.4164362061005,8.25763491755008,7.6495846176385,14.5798361872072,0,16.2616817500122,0,0,0,0,0.0939839179798536,0,9.59435096879318,0,0,4.97496473472843,2.19100916473955,15.5967956357544,0,0,0,0,15.3417783749466,0,0,0,0,0.764859003745869,0,4.79347499787314,1.87052183685892,0.551369397209069,0,0.0757786982182394,0,0,0,2.34557380091079,1.42838658878244,0.387533459016037,0.248298857183432,0,0.12729431655633,0,1.74173398317569,1.71116650542641,1.0776328482334,7.81772038780172,3.99192427855216,0.488419611665847,0,0,0.0898252021065869,2.34640942403454,0.733448665097199,0.406896178315738,1.99727032255654,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0,0,0.46480320348181,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37696839079683,0.786021525498329,1.85041349099558,0.167186495390678,1.62961133316795,0.946895611469467,0,3.56513462032555,3.24066498222321,7.97522020501036,4.87446954777028,1.5370958367081,2.08094956095805,0.328875809207352,0,0.289803085735052,0.593146252648242,0,1.04535523804977,1.92625882585863,3.83220493601921,4.12352934579156,7.33757106856558,2.86708872891687,1.30216690771284,2.85135613334512,1.95747654801105,1.53583933385302,2.49861453104692,3.07810427657222,1.64225599384209,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8072391436075,23.1927094562599,13.5946913157337,5.49403591581463,17.4101387104184,16.0590037993365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.308061348417659,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0.229723400206959,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,1.23408681925858,0,0.540031437238115,0.79312517629427,0,0,7.35120647943095,3.71606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0,0,19.0995587790152,5.64232893582013,4.91457123358771,0,0,0,0,0,0.996239941255349,3.31540698637377,24.4374765418648,0,0,0,4.673154259661,0.358042349351218,0,1.57829449019094,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,1.0241410345695,15.255219017566,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,1.15425387755696,0,0,2.42345639906385,0.325942115766024,3.50901275705111,0.183195186803725,0,0,0,0,0,0,0,0,0,0,4.08082020397869,0,0.216388639742091,0.995261931078505,6.72277490225378,7.33236173920351,0,0,0,0.134802265961354,0,0,8.94028467156763,3.7176277597097,0,11.4429476826323,12.0990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,11.975621945124,1.46988596121566,0.0870592065804026,3.14508002835654,0,0,0,0,1.93978032976839,0,0.677942222341597,0,0,0,1.36885967914362,0.0801588202515337,10.2457437474889,0,21.4694721559618,0,1.20116498503375,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,14.1772090354284,0,0,0,0,0,0,0,0,0.492137407573744,2.03215996957883,0,0.136203406111576,8.84142316557605,10.7280760545842,14.1249714929923,0,0,0,0,1.26089131678717,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,33.8311210712003,10.2515916064987,34.5849471219265,19.8834746566654,0,2.76656284657122,0,0.638341257770182,0,0,0,0,12.5643277000187,0,0,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,3.27834434064817,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.88332946650923,0,0,0,0,0,0,1.42899623863589,0,19.5378502808273,0,0,7.68851648328635,0,0,0,0,0,23.5750839748588,0.992422356778588,0,2.29972369751271,0,0,10.3184152720227,20.7172594129681,0.266107110487916,0.115233987555779,0,0,0,0,0.778619813244484,2.98273752831953,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,14.6277301998894,0,0,5.08064460229115,3.43660302816075,0,0,0.223710863595585,2.45375584038107,56.569917191773,0,0,0,3.39997695141398,10.995154782719,0,0,19.4267261107011,0,10.4164362061005,8.25763491755008,7.6495846176385,14.5798361872072,0,16.2616817500122,0,0,0,0,0.0939839179798536,0,9.59435096879318,0,0,4.97496473472843,2.19100916473955,15.5967956357544,0,0,0,0,15.3417783749466,0,0,0,0,0.764859003745869,0,4.79347499787314,1.87052183685892,0.551369397209069,0,0.0757786982182394,0,0,0,2.34557380091079,1.42838658878244,0.387533459016037,0.248298857183432,0,0.12729431655633,0,1.74173398317569,1.71116650542641,1.0776328482334,7.81772038780172,3.99192427855216,0.488419611665847,0,0,0.0898252021065869,2.34640942403454,0.733448665097199,0.406896178315738,1.99727032255654,0,0.320568492303233 | ||
|short_description=p9@RABGAP1L | |||
}} | }} |
Latest revision as of 19:15, 18 September 2015
Short description: | p9@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001035230_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | Q5R372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.38e-12 | 18 |
alpha-beta T cell | 2.38e-12 | 18 |
immature T cell | 2.38e-12 | 18 |
mature T cell | 2.38e-12 | 18 |
immature alpha-beta T cell | 2.38e-12 | 18 |
embryonic stem cell | 1.76e-10 | 5 |
CD8-positive, alpha-beta T cell | 3.05e-08 | 11 |
T cell | 4.69e-08 | 25 |
pro-T cell | 4.69e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.83e-10 | 118 |
gastrointestinal system | 9.51e-08 | 25 |
digestive system | 1.04e-07 | 145 |
digestive tract | 1.04e-07 | 145 |
primitive gut | 1.04e-07 | 145 |
foregut | 9.54e-07 | 87 |