FFCP PHASE1:Hg19::chr1:153521714..153521749,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153521714..153521749,- to FFCP PHASE1:Hg19::chr1:153521714..153521749,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6274 | |EntrezGene=6274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10493 | |HGNC=10493 | ||
|TSSclassifier=strong | |||
|UniProt=P33764 | |UniProt=P33764 | ||
|association_with_transcript=0bp_to_NM_002960,uc001fca.1_5end | |||
|cluster_id=chr1:153521714..153521749,- | |||
|description=CAGE_peak_1_at_S100A3_5end | |||
|id=chr1:153521714..153521749,- | |||
|ontology_enrichment_celltype=CL:0000055!7.45e-27!180;CL:0000057!2.52e-18!75;CL:0000222!1.27e-16!119;CL:0000220!4.48e-14!246;CL:0002321!9.14e-14!248;CL:0000144!3.96e-11!625;CL:0000183!1.24e-10!59;CL:0002371!2.18e-10!591;CL:0000680!2.01e-09!57;CL:0000056!2.01e-09!57;CL:0000355!2.01e-09!57;CL:0000548!8.67e-09!679;CL:0000004!8.67e-09!679;CL:0000255!8.67e-09!679;CL:0000187!9.17e-09!54;CL:0002620!1.83e-08!23;CL:0000012!3.06e-08!682;CL:1000449!2.30e-07!16;CL:0000393!3.88e-07!60;CL:0000211!3.88e-07!60;CL:1000497!4.80e-07!18;CL:0002518!4.80e-07!18;CL:0000192!7.71e-07!42;CL:0000514!7.71e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.77e-09;23!CL:0000134;6.56e-09;55!CL:0000057;8.31e-09;73!CL:1000449;9.41e-09;15!CL:1000497;1.21e-08;17!CL:0002518;1.21e-08;17!CL:0002494;1.97e-08;16!CL:0000723;1.45e-07;61!CL:0000048;2.64e-07;58!CL:1000507;4.53e-07;10!CL:1000494;4.53e-07;10!CL:0002681;8.53e-07;12!CL:0002584;8.53e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.77e-20,76;CL:0000222,1.07e-11,121;CL:0002620,1.75e-09,23;CL:0002321,6.66e-09,250;CL:1000449,9.98e-09,15;CL:1000497,1.33e-08,17;CL:0002518,1.33e-08,17;CL:0002494,4.82e-08,16;CL:0000048,7.25e-08,427;CL:0000723,1.33e-07,433;CL:1000507,4.57e-07,10;CL:1000494,4.57e-07,10;CL:0000034,5.10e-07,441;CL:0002681,7.90e-07,12;CL:0002584,7.90e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.20e-17!143;UBERON:0000475!2.94e-15!365;UBERON:0000914!1.86e-14!83;UBERON:0002329!1.86e-14!83;UBERON:0003077!1.86e-14!83;UBERON:0003059!1.86e-14!83;UBERON:0007282!1.86e-14!83;UBERON:0009618!1.86e-14!83;UBERON:0007285!1.86e-14!83;UBERON:0002100!3.09e-13!216;UBERON:0004290!2.34e-12!70;UBERON:0000468!2.11e-11!659;UBERON:0003914!1.26e-10!118;UBERON:0000486!1.62e-10!82;UBERON:0000119!3.31e-10!312;UBERON:0000467!3.60e-10!625;UBERON:0000481!3.84e-10!347;UBERON:0000480!5.60e-10!626;UBERON:0003102!5.79e-10!95;UBERON:0000483!6.59e-10!309;UBERON:0003104!8.25e-10!238;UBERON:0009142!8.25e-10!238;UBERON:0002049!6.11e-09!79;UBERON:0007798!6.11e-09!79;UBERON:0004872!1.15e-08!84;UBERON:0001134!1.72e-08!61;UBERON:0002036!1.72e-08!61;UBERON:0003082!1.72e-08!61;UBERON:0001009!5.10e-08!113;UBERON:0002385!5.92e-08!63;UBERON:0001015!5.92e-08!63;UBERON:0000383!5.92e-08!63;UBERON:0002199!7.04e-08!45;UBERON:0002416!7.04e-08!45;UBERON:0000490!1.35e-07!138;UBERON:0004535!1.59e-07!110;UBERON:0000926!1.67e-07!448;UBERON:0004120!1.67e-07!448;UBERON:0006603!1.67e-07!448;UBERON:0004211!2.30e-07!16;UBERON:0001285!2.30e-07!16;UBERON:0007684!2.30e-07!16;UBERON:0003220!2.30e-07!16;UBERON:0004208!2.30e-07!16;UBERON:0003103!2.72e-07!69;UBERON:0002097!3.37e-07!40;UBERON:0006555!3.96e-07!17;UBERON:0005103!3.96e-07!17;UBERON:0000083!3.96e-07!17;UBERON:0009201!3.96e-07!17;UBERON:0004819!3.96e-07!17;UBERON:0006553!3.96e-07!17;UBERON:0003074!3.96e-07!17;UBERON:0003060!3.96e-07!17;UBERON:0000477!5.40e-07!286;UBERON:0007100!7.98e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.41e-09;15!UBERON:0004819;9.41e-09;15!UBERON:0001285;9.41e-09;15!UBERON:0007684;9.41e-09;15!UBERON:0000353;5.17e-08;15!UBERON:0002067;9.60e-08;9!UBERON:0004211;4.53e-07;10!UBERON:0009773;4.53e-07;10!UBERON:0001231;4.53e-07;10!UBERON:0004810;4.53e-07;10!UBERON:0001225;8.53e-07;12!UBERON:0008987;8.53e-07;12!UBERON:0007100;8.70e-07;25!UBERON:0000948;9.87e-07;22 | |||
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| ||
|short_description=p1@S100A3 | |||
}} | }} |
Latest revision as of 05:53, 17 September 2015
Short description: | p1@S100A3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_S100A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002960, uc001fca.1_5end |
EntrezGene: | S100A3 |
HGNC: | 10493 |
UniProt: | P33764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.77e-20 | 76 |
mesodermal cell | 1.07e-11 | 121 |
skin fibroblast | 1.75e-09 | 23 |
embryonic cell | 6.66e-09 | 250 |
epithelial cell of nephron | 9.98e-09 | 15 |
kidney cell | 1.33e-08 | 17 |
kidney epithelial cell | 1.33e-08 | 17 |
cardiocyte | 4.82e-08 | 16 |
multi fate stem cell | 7.25e-08 | 427 |
somatic stem cell | 1.33e-07 | 433 |
kidney tubule cell | 4.57e-07 | 10 |
nephron tubule epithelial cell | 4.57e-07 | 10 |
stem cell | 5.10e-07 | 441 |
kidney cortical cell | 7.90e-07 | 12 |
renal cortical epithelial cell | 7.90e-07 | 12 |