FFCP PHASE1:Hg19::chr1:150780757..150780800,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:150780757..150780800,- to FFCP PHASE1:Hg19::chr1:150780757..150780800,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1513 | |EntrezGene=1513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2536 | |HGNC=2536 | ||
|TSSclassifier=strong | |||
|UniProt=P43235 | |UniProt=P43235 | ||
|association_with_transcript=0bp_to_ENST00000271651_5end | |||
|cluster_id=chr1:150780757..150780800,- | |||
|coexpression_cluster_id=C3863 | |||
|description=CAGE_peak_2_at_CTSK_5end | |||
|id=chr1:150780757..150780800,- | |||
|ontology_enrichment_celltype=CL:0000055!4.33e-31!180;CL:0000057!1.89e-19!75;CL:0000187!1.31e-12!54;CL:0000680!3.06e-12!57;CL:0000056!3.06e-12!57;CL:0000355!3.06e-12!57;CL:0000393!5.62e-12!60;CL:0000211!5.62e-12!60;CL:0000183!5.45e-11!59;CL:0000192!1.52e-10!42;CL:0000514!1.52e-10!42;CL:0002620!1.05e-09!23;CL:0000359!3.86e-08!32;CL:0000136!8.86e-08!15;CL:0002334!3.66e-07!12;CL:0000325!3.78e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.98e-10;23!CL:0000134;1.66e-09;55!CL:0000723;1.07e-08;61!CL:0000192;1.77e-08;43!CL:0000057;2.52e-08;73!CL:0000048;3.14e-08;58!CL:0000359;5.66e-08;32!CL:0002334;1.28e-07;12!CL:0000187;1.62e-07;55!CL:0002320;3.26e-07;188!CL:0000136;6.25e-07;13!CL:0000393;9.30e-07;61!CL:0000211;9.30e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.94e-20,76;CL:0000187,4.51e-13,55;CL:0000680,5.10e-12,58;CL:0000056,5.10e-12,58;CL:0000355,5.10e-12,58;CL:0000393,1.00e-11,61;CL:0000211,1.00e-11,61;CL:0000192,7.78e-11,43;CL:0000514,7.78e-11,43;CL:0002620,1.91e-10,23;CL:0000136,2.92e-08,15;CL:0000359,4.82e-08,32;CL:0002334,1.34e-07,12;CL:0000048,5.58e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!5.43e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.12e-21!83;UBERON:0002329!4.12e-21!83;UBERON:0003077!4.12e-21!83;UBERON:0003059!4.12e-21!83;UBERON:0007282!4.12e-21!83;UBERON:0009618!4.12e-21!83;UBERON:0007285!4.12e-21!83;UBERON:0004290!2.08e-16!70;UBERON:0003102!7.24e-14!95;UBERON:0000486!8.40e-14!82;UBERON:0002385!6.65e-13!63;UBERON:0001015!6.65e-13!63;UBERON:0000383!6.65e-13!63;UBERON:0001134!2.24e-12!61;UBERON:0002036!2.24e-12!61;UBERON:0003082!2.24e-12!61;UBERON:0000468!3.76e-12!659;UBERON:0000475!8.69e-12!365;UBERON:0004872!2.36e-11!84;UBERON:0002199!3.72e-11!45;UBERON:0002416!3.72e-11!45;UBERON:0004573!2.52e-10!33;UBERON:0004571!2.52e-10!33;UBERON:0001637!6.51e-10!42;UBERON:0003509!6.51e-10!42;UBERON:0004572!6.51e-10!42;UBERON:0002097!4.61e-09!40;UBERON:0000467!6.41e-09!625;UBERON:0000480!9.63e-09!626;UBERON:0001013!1.52e-08!14;UBERON:0001981!3.84e-08!60;UBERON:0007500!3.84e-08!60;UBERON:0004537!3.84e-08!60;UBERON:0006965!3.84e-08!60;UBERON:0005256!9.42e-08!143;UBERON:0002049!1.63e-07!79;UBERON:0007798!1.63e-07!79;UBERON:0000479!3.20e-07!787;UBERON:0000947!8.29e-07!21;UBERON:0010191!8.29e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.15e-10;33!UBERON:0004571;9.15e-10;33!UBERON:0001013;4.25e-09;14!UBERON:0002199;9.66e-09;46!UBERON:0002416;9.66e-09;46!UBERON:0002097;2.70e-08;41!UBERON:0003102;4.03e-08;50!UBERON:0001637;7.00e-08;42!UBERON:0003509;7.00e-08;42!UBERON:0004572;7.00e-08;42!UBERON:0002384;8.49e-08;198!UBERON:0000075;3.85e-07;16!UBERON:0000947;7.86e-07;21!UBERON:0010191;7.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.44e-17,73;UBERON:0002329,1.67e-16,71;UBERON:0003059,1.67e-16,71;UBERON:0007282,1.67e-16,71;UBERON:0004290,1.67e-16,71;UBERON:0009618,1.67e-16,71;UBERON:0003077,1.73e-16,72;UBERON:0007285,1.73e-16,72;UBERON:0003102,2.06e-16,99;UBERON:0000486,4.71e-14,83;UBERON:0002199,3.75e-13,46;UBERON:0002416,3.75e-13,46;UBERON:0007503,7.13e-13,78;UBERON:0002385,7.92e-13,64;UBERON:0001015,7.92e-13,64;UBERON:0000383,7.92e-13,64;UBERON:0001134,2.86e-12,62;UBERON:0002036,2.86e-12,62;UBERON:0003082,2.86e-12,62;UBERON:0002097,7.76e-11,41;UBERON:0004573,1.30e-10,33;UBERON:0004571,1.30e-10,33;UBERON:0004872,2.09e-10,83;UBERON:0001637,5.32e-10,42;UBERON:0003509,5.32e-10,42;UBERON:0004572,5.32e-10,42;UBERON:0001013,4.36e-09,14;UBERON:0000926,8.47e-08,315;UBERON:0004120,8.47e-08,315;UBERON:0006603,8.47e-08,315;UBERON:0004923,1.13e-07,66;UBERON:0005256,1.14e-07,122;UBERON:0000479,1.14e-07,773;UBERON:0007500,3.38e-07,59;UBERON:0001981,3.38e-07,59;UBERON:0004537,3.38e-07,59;UBERON:0006965,3.38e-07,59;UBERON:0000075,3.74e-07,16;UBERON:0000947,7.76e-07,21;UBERON:0010191,7.76e-07,21 | |||
|phase1_expression=194.577544198766,92.2773257970137,111.072070427625,105.076963270787,149.285005538714,89.850867982338,15.1979926900986,168.669206204964,152.793592496906,0.245733936501509,0,0,0,76.3638397763488,45.0700430989965,34.9609076154923,22.9023920649111,32.8639540674318,27.3242367322684,0,0,0.313454721478088,2.28988789704845,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0.919421224478927,3.0120591877825,2.21852406100073,0,0,0,0,0,0,81.5052326233325,53.1185612271126,57.6969271500578,0.726991193897824,0,0.242584061187816,0,0,0,0,0.512321413058201,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,17.0664806419773,26.8280343881454,9.46182957642124,17.7105184668437,14.5387994084408,12.7464936685525,116.907034216512,57.9095495660137,11.7223173283444,3.99112915432615,1.40535657109002,16.0449367484698,2.5500670180478,1.48313777113772,0.324547393654683,0,3.58986493400936,0,0,0,10.3356451830687,25.8070378531837,10.4142150482278,3.39184765154406,10.9069853414576,1.10047216776027,1.67195973229448,0,0,0,0.402829317109147,0,0.732186172644509,0.367663080345869,2.43042584364528,2.85759130509055,1.12264686313085,2.59006405111641,0,0.949265659568129,1.09921046358244,0,0,0,7.45457927542978,12.4097901431288,54.2877641334197,114.160975058028,38.3041852774226,4.48542080113846,4.2699598291882,0.74000264525148,23.963249725782,19.2636261059654,12.4231046366229,9.23280308634082,12.09969441408,8.43557154601668,199.158129017744,77.5841677300451,174.556058884504,43.8030679941243,46.78128092239,52.1072492865342,100.239698086153,61.2943243385722,90.9266874346736,458.569102910873,159.239902455391,1.82032272387605,0.718618141816238,110.596826867821,41.914704157108,67.8807082936248,26.7776348737311,45.9731693698529,154.895438732701,4.65071950956086,23.6794319109298,61.9316427573846,40.4789931214763,64.8196767542309,57.297206256572,17.5195567231028,48.9487332152081,36.6244640963548,37.5132469870615,20.4471357137733,60.6608832052753,101.675369739033,68.8718609482232,25.5910329498206,23.3993617388473,9.27652095183825,17.4557517178134,4.01526433544605,0.121973706129595,0.397589304964456,1.2781333715647,1.34759371519982,0.756962552626885,0,84.4827474581006,76.5456716449533,20.7202382028721,86.3724346139481,222.338880354232,0,0,0,0,0,0,0,0,0,0,0,5.7620361586396,0,0,0,3.54473944008842,0,0,4.97546649865724,16.4625428112938,0,5.12697759299317,0.277765335475589,4.88712457965487,5.19967392639789,2.88662684050547,2.89826012437692,1.05667824812239,0.144366447761074,0,0.380508304469197,0,0,22.6519645600406,43.7587975810374,20.3624692335558,23.4334584966942,4.87148171776693,10.0660319042094,2.05984602216551,9.88155390947471,0.766765358330422,0,0,1.65862492432618,0.576479813667846,0.75745460055828,75.3085026305125,142.481682733238,96.1183067122385,30.7930402840869,74.0357947463929,3.60411669412701,277.823292516922,7.73704481982989,10.899001720832,8.87393258433495,20.1663876582133,32.1890801266694,43.955743132912,204.77234977035,105.04751128048,10.5455023447478,1.41849132023278,4.26275486425759,3.0025378668211,0,0,50.1633723812352,1.77695974371273,7.12756685640086,35.8712858700907,25.2744702994085,0.799783929456456,63.244365933419,21.5970549315814,27.4084121327941,2.87549826589899,6.89171615004683,1.42636905040718,4.92256442669769,0.205476322550383,0.895304816199478,0,0,0.215627574859517,0,2.28685161800217,0,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,28.3417345871213,21.0071618845064,16.2759014219841,17.8854940916494,32.1172179834891,35.9561506277371,28.582505258222,82.7601774251227,636.741011356758,188.320989752359,17.9340911604568,15.1182718204197,215.471363880845,4.69922777910577,7.89229874764969,0.206768026122887,0,0.106727557803444,0,3.32870879020994,4.83824469327489,90.3112420460348,37.2912595089992,74.3749250247645,121.475913494405,44.0068234197365,27.1843126732697,34.1361552823479,47.1881663036126,50.4275299889281,70.3829727038344,113.197465562029,66.1237053437168,0,0,0.0920809889358963,15.9592082948803,37.6928717773904,99.7856797841218,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0531558804703,0.984043937099117,5.53143270929315,18.0321770383514,0,0,35.6044633557627,25.3523495954243,27.3162680735071,9.57040111092008,9.24291702687866,11.5127756044597,18.194427567958,60.7998585954429,19.8672870662493,7.92607634969738,10.861908348902,0,0,0,0.10115778085555,17.1992853239996,94.443704049192,49.4896461814026,29.5712236969045,25.550689455217,36.5371856671531,53.373375101929,2.71937284809783,19.7243935760624,22.7793185797483,3.8126038784765,2.303080121802,17.1175595213568,29.5929020571121,26.6882537667738,73.9275800667424,8.5106479218177,5.1837457032102,20.6226131204782,11.0957224821106,24.8542489180999,3.41343617362713,101.141098196983,54.9380763135128,24.7064839648454,22.0592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| ||
|short_description=p2@CTSK | |||
}} | }} |
Latest revision as of 23:10, 16 September 2015
Short description: | p2@CTSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTSK_5end |
Coexpression cluster: | C3863_Osteoblast_leiomyoma_Fibroblast_mesenchymal_Melanocyte_Mesenchymal_Adipocyte |
Association with transcript: | 0bp_to_ENST00000271651_5end |
EntrezGene: | CTSK |
HGNC: | 2536 |
UniProt: | P43235 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.94e-20 | 76 |
muscle cell | 4.51e-13 | 55 |
muscle precursor cell | 5.10e-12 | 58 |
myoblast | 5.10e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.10e-12 | 58 |
electrically responsive cell | 1.00e-11 | 61 |
electrically active cell | 1.00e-11 | 61 |
smooth muscle cell | 7.78e-11 | 43 |
smooth muscle myoblast | 7.78e-11 | 43 |
skin fibroblast | 1.91e-10 | 23 |
fat cell | 2.92e-08 | 15 |
vascular associated smooth muscle cell | 4.82e-08 | 32 |
preadipocyte | 1.34e-07 | 12 |
multi fate stem cell | 5.58e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.58e-07 | 14 |