FFCP PHASE1:Hg19::chr19:6740730..6740786,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:6740730..6740786,+ to FFCP PHASE1:Hg19::chr19:6740730..6740786,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9322 | |EntrezGene=9322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12304 | |HGNC=12304 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000465190_5end | |||
|cluster_id=chr19:6740730..6740786,+ | |||
|description=CAGE_peak_3_at_TRIP10_5end | |||
|id=chr19:6740730..6740786,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.81e-23!180;CL:0000222!1.92e-14!119;CL:0000183!6.53e-13!59;CL:0000187!1.18e-11!54;CL:0000057!1.28e-11!75;CL:0000393!1.61e-11!60;CL:0000211!1.61e-11!60;CL:0000680!1.68e-11!57;CL:0000056!1.68e-11!57;CL:0000355!1.68e-11!57;CL:0002321!1.86e-11!248;CL:0000220!3.78e-11!246;CL:0000192!6.09e-11!42;CL:0000514!6.09e-11!42;CL:0000359!2.08e-09!32;CL:0002371!1.08e-08!591;CL:0000144!4.09e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.73e-09;32!CL:0000192;7.61e-08;43!CL:0000349;8.68e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.66e-14,121;CL:0000393,1.72e-12,61;CL:0000211,1.72e-12,61;CL:0000187,2.61e-12,55;CL:0000680,5.80e-12,58;CL:0000056,5.80e-12,58;CL:0000355,5.80e-12,58;CL:0000192,1.12e-11,43;CL:0000514,1.12e-11,43;CL:0000359,5.59e-10,32;CL:0000057,8.43e-10,76;CL:0002321,5.08e-08,250;CL:0000349,9.53e-08,19;CL:0002334,7.95e-07,12;CL:0000048,8.09e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;7.61e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.06e-14!659;UBERON:0002049!5.16e-14!79;UBERON:0007798!5.16e-14!79;UBERON:0004872!3.46e-13!84;UBERON:0000055!4.19e-13!69;UBERON:0001981!4.37e-13!60;UBERON:0007500!4.37e-13!60;UBERON:0004537!4.37e-13!60;UBERON:0006965!4.37e-13!60;UBERON:0004290!8.05e-12!70;UBERON:0000486!8.92e-12!82;UBERON:0001134!2.65e-11!61;UBERON:0002036!2.65e-11!61;UBERON:0003082!2.65e-11!61;UBERON:0002385!5.08e-11!63;UBERON:0001015!5.08e-11!63;UBERON:0000383!5.08e-11!63;UBERON:0000914!7.70e-11!83;UBERON:0002329!7.70e-11!83;UBERON:0003077!7.70e-11!83;UBERON:0003059!7.70e-11!83;UBERON:0007282!7.70e-11!83;UBERON:0009618!7.70e-11!83;UBERON:0007285!7.70e-11!83;UBERON:0001637!2.17e-10!42;UBERON:0003509!2.17e-10!42;UBERON:0004572!2.17e-10!42;UBERON:0000467!1.03e-09!625;UBERON:0000480!1.24e-09!626;UBERON:0004535!1.04e-08!110;UBERON:0001009!2.44e-08!113;UBERON:0005256!3.23e-08!143;UBERON:0000490!3.73e-08!138;UBERON:0000922!4.31e-08!612;UBERON:0004573!5.53e-08!33;UBERON:0004571!5.53e-08!33;UBERON:0003914!8.64e-08!118;UBERON:0000478!8.75e-08!24;UBERON:0004923!1.38e-07!57;UBERON:0000926!1.56e-07!448;UBERON:0004120!1.56e-07!448;UBERON:0006603!1.56e-07!448;UBERON:0002100!2.96e-07!216;UBERON:0002050!3.70e-07!605;UBERON:0005423!3.70e-07!605;UBERON:0000475!3.73e-07!365;UBERON:0000923!5.83e-07!604;UBERON:0005291!5.83e-07!604;UBERON:0006598!5.83e-07!604;UBERON:0002532!5.83e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.19e-09;24!UBERON:0007500;1.59e-08;56!UBERON:0001981;1.59e-08;56!UBERON:0004537;1.59e-08;56!UBERON:0001637;4.82e-08;42!UBERON:0003509;4.82e-08;42!UBERON:0004572;4.82e-08;42!UBERON:0004573;1.53e-07;33!UBERON:0004571;1.53e-07;33!UBERON:0000055;6.35e-07;65 | |||
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| ||
|short_description=p3@TRIP10 | |||
}} | }} |
Latest revision as of 18:57, 24 September 2015
Short description: | p3@TRIP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIP10_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000465190_5end |
EntrezGene: | TRIP10 |
HGNC: | 12304 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.66e-14 | 121 |
electrically responsive cell | 1.72e-12 | 61 |
electrically active cell | 1.72e-12 | 61 |
muscle cell | 2.61e-12 | 55 |
muscle precursor cell | 5.80e-12 | 58 |
myoblast | 5.80e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.80e-12 | 58 |
smooth muscle cell | 1.12e-11 | 43 |
smooth muscle myoblast | 1.12e-11 | 43 |
vascular associated smooth muscle cell | 5.59e-10 | 32 |
fibroblast | 8.43e-10 | 76 |
embryonic cell | 5.08e-08 | 250 |
extraembryonic cell | 9.53e-08 | 19 |
preadipocyte | 7.95e-07 | 12 |
multi fate stem cell | 8.09e-07 | 427 |