FFCP PHASE1:Hg19::chr19:4559572..4559583,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4559572..4559583,- to FFCP PHASE1:Hg19::chr19:4559572..4559583,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10501 | |EntrezGene=10501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10739 | |HGNC=10739 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3T3 | |UniProt=Q9H3T3 | ||
|association_with_transcript=187bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | |||
|cluster_id=chr19:4559572..4559583,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_5_at_SEMA6B_5end | |||
|id=chr19:4559572..4559583,- | |||
|ontology_enrichment_celltype=CL:0002057!6.24e-38!42;CL:0000860!1.38e-34!45;CL:0000115!1.75e-27!35;CL:0002139!1.23e-25!24;CL:0002194!3.94e-22!63;CL:0000576!3.94e-22!63;CL:0000040!3.94e-22!63;CL:0000559!3.94e-22!63;CL:0002009!4.16e-21!65;CL:0002078!5.50e-20!44;CL:0000766!5.17e-19!76;CL:0000839!8.22e-19!70;CL:0000557!2.16e-18!71;CL:0000071!2.73e-17!18;CL:0002546!2.73e-17!18;CL:0000213!1.84e-13!57;CL:0000215!1.84e-13!57;CL:0000763!9.98e-11!112;CL:0000049!9.98e-11!112;CL:0005020!3.26e-10!6;CL:0002138!3.26e-10!6;CL:0005022!3.26e-10!6;CL:1000413!1.00e-09!9;CL:0002087!1.49e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.72e-74;33!CL:0002057;4.72e-74;33!CL:0000473;1.03e-50;39!CL:0000234;1.03e-50;39!CL:0000576;1.17e-34;48!CL:0000115;1.12e-20;36!CL:0000766;7.57e-19;69!CL:0002138;8.88e-18;6!CL:0002139;1.72e-17;24!CL:0002078;3.67e-14;45!CL:0000763;2.36e-10;100!CL:0002188;1.42e-09;5!CL:0000213;2.60e-08;58!CL:0000215;2.60e-08;58!CL:0002087;2.64e-08;104!CL:1000413;1.43e-07;9!CL:0002262;1.81e-07;2!CL:1000398;1.81e-07;2!CL:1000746;7.59e-07;7!CL:1000612;7.59e-07;7!CL:0000071;9.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.52e-66,42;CL:0002057,3.52e-66,42;CL:0000473,8.58e-57,48;CL:0000234,8.58e-57,48;CL:0002194,1.16e-43,59;CL:0000576,1.16e-43,59;CL:0000040,1.16e-43,59;CL:0000559,1.16e-43,59;CL:0002009,5.73e-42,61;CL:0000766,3.27e-39,72;CL:0000839,3.52e-38,66;CL:0000557,1.73e-37,67;CL:0000115,1.44e-24,36;CL:0000763,2.98e-23,108;CL:0000049,2.98e-23,108;CL:0002078,1.13e-18,45;CL:0002087,1.96e-18,115;CL:0005020,6.22e-18,6;CL:0002138,6.22e-18,6;CL:0005022,6.22e-18,6;CL:0002139,1.70e-17,24;CL:0002031,2.50e-17,120;CL:0000738,1.08e-16,136;CL:0000213,2.02e-13,58;CL:0000215,2.02e-13,58;CL:0002032,8.46e-13,161;CL:0000837,8.46e-13,161;CL:0000037,6.37e-12,168;CL:0000988,6.68e-11,177;CL:0002188,1.52e-09,5;CL:0002262,1.75e-07,2;CL:1000398,1.75e-07,2;CL:1000413,1.94e-07,9;CL:1000746,7.98e-07,7;CL:1000612,7.98e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002057;5.39e-49;42!CL:0005022;8.88e-18;6!CL:0000049;1.81e-08;108!CL:0002546;9.95e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-22!115;UBERON:0002405!6.86e-19!115;UBERON:0002193!1.71e-17!112;UBERON:0001986!2.73e-17!18;UBERON:0004638!2.73e-17!18;UBERON:0004852!2.73e-17!18;UBERON:0003081!2.31e-15!216;UBERON:0002371!4.08e-15!80;UBERON:0001474!2.47e-13!86;UBERON:0000487!2.60e-13!22;UBERON:0002390!3.88e-12!102;UBERON:0003061!3.88e-12!102;UBERON:0006914!3.50e-11!25;UBERON:0004765!7.10e-10!101;UBERON:0001434!7.10e-10!101;UBERON:0003915!1.00e-09!9;UBERON:0004700!1.00e-09!9;UBERON:0001917!1.00e-09!9;UBERON:0000467!1.06e-09!625;UBERON:0000480!1.24e-09!626;UBERON:0002465!2.29e-09!10;UBERON:0000055!1.02e-08!69;UBERON:0000468!1.34e-08!659;UBERON:0004111!5.88e-08!241;UBERON:0001473!2.23e-07!8;UBERON:0004536!2.23e-07!8;UBERON:0006558!2.23e-07!8;UBERON:0002049!2.29e-07!79;UBERON:0007798!2.29e-07!79;UBERON:0001049!5.08e-07!57;UBERON:0005068!5.08e-07!57;UBERON:0006241!5.08e-07!57;UBERON:0007135!5.08e-07!57;UBERON:0000025!5.34e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.69e-13;8!UBERON:0004536;3.69e-13;8!UBERON:0006558;3.69e-13;8!UBERON:0002465;2.20e-10;10!UBERON:0003915;1.43e-07;9!UBERON:0004700;1.43e-07;9!UBERON:0001917;1.43e-07;9!UBERON:0001281;1.81e-07;2!UBERON:0003497;1.81e-07;2!UBERON:0003909;1.81e-07;2!UBERON:0003835;1.81e-07;2!UBERON:0000074;7.59e-07;7!UBERON:0001229;7.59e-07;7!UBERON:0004638;9.95e-07;18!UBERON:0001986;9.95e-07;18!UBERON:0004852;9.95e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.39e-41,93;UBERON:0002193,2.08e-34,108;UBERON:0002371,4.36e-32,76;UBERON:0001474,3.86e-29,82;UBERON:0002390,1.61e-26,98;UBERON:0003061,1.61e-26,98;UBERON:0004765,8.04e-26,90;UBERON:0003081,1.19e-24,203;UBERON:0001434,2.03e-22,100;UBERON:0001473,2.84e-13,8;UBERON:0004536,2.84e-13,8;UBERON:0006558,2.84e-13,8;UBERON:0000926,2.98e-13,315;UBERON:0004120,2.98e-13,315;UBERON:0006603,2.98e-13,315;UBERON:0002465,1.79e-10,10;UBERON:0002204,3.03e-10,167;UBERON:0003887,3.82e-08,12;UBERON:0001281,1.75e-07,2;UBERON:0003497,1.75e-07,2;UBERON:0003909,1.75e-07,2;UBERON:0003835,1.75e-07,2;UBERON:0003915,1.94e-07,9;UBERON:0004700,1.94e-07,9;UBERON:0001917,1.94e-07,9;UBERON:0000055,2.88e-07,68;UBERON:0010532,7.98e-07,7;UBERON:0000074,7.98e-07,7;UBERON:0001229,7.98e-07,7;UBERON:0001230,7.98e-07,7;UBERON:0003220,7.98e-07,7;UBERON:0005749,7.98e-07,7;UBERON:0004199,7.98e-07,7;UBERON:0004209,7.98e-07,7;UBERON:0004198,7.98e-07,7;UBERON:0002081,8.64e-07,2;UBERON:0010227,8.64e-07,2 | |||
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| ||
|short_description=p5@SEMA6B | |||
}} | }} |
Latest revision as of 15:51, 18 September 2015
Short description: | p5@SEMA6B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA6B_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 187bp_to_NM_032108, uc010dud.2, uc010xih.1_5end |
EntrezGene: | SEMA6B |
HGNC: | 10739 |
UniProt: | Q9H3T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data