FFCP PHASE1:Hg19::chr17:73874654..73874675,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:73874654..73874675,- to FFCP PHASE1:Hg19::chr17:73874654..73874675,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91107 | |EntrezGene=91107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19020 | |HGNC=19020 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LD4 | |UniProt=Q96LD4 | ||
|association_with_transcript=0bp_to_ENST00000254816,NM_033452,uc002jpw.2_5end | |||
|cluster_id=chr17:73874654..73874675,- | |||
|coexpression_cluster_id=C3678 | |||
|description=CAGE_peak_1_at_TRIM47_5end | |||
|id=chr17:73874654..73874675,- | |||
|ontology_enrichment_celltype=CL:0002078!6.94e-19!44;CL:0000115!4.43e-18!35;CL:0000213!1.31e-17!57;CL:0000215!1.31e-17!57;CL:0000066!1.48e-17!254;CL:0002139!1.52e-12!24;CL:0000220!1.02e-11!246;CL:0002321!3.06e-11!248;CL:0000071!6.17e-10!18;CL:0002546!6.17e-10!18;CL:0000222!3.67e-09!119;CL:0000076!3.34e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.81e-16;36!CL:0002078;3.66e-13;45!CL:0002139;8.07e-13;24!CL:0000213;3.45e-10;58!CL:0000215;3.45e-10;58!CL:0000071;3.73e-10;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.36e-19,45;CL:0000115,5.11e-19,36;CL:0000213,2.69e-18,58;CL:0000215,2.69e-18,58;CL:0000066,3.74e-16,253;CL:0002139,8.44e-13,24;CL:0002321,1.35e-10,250;CL:0000071,3.95e-10,18;CL:0002546,3.95e-10,18;CL:0000222,1.31e-09,121;CL:0000076,2.81e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;3.73e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.56e-25!241;UBERON:0000477!3.56e-25!286;UBERON:0000480!6.59e-21!626;UBERON:0000467!1.04e-20!625;UBERON:0000483!3.02e-20!309;UBERON:0000468!8.51e-20!659;UBERON:0000119!2.44e-19!312;UBERON:0002050!4.17e-19!605;UBERON:0005423!4.17e-19!605;UBERON:0000923!9.50e-19!604;UBERON:0005291!9.50e-19!604;UBERON:0006598!9.50e-19!604;UBERON:0002532!9.50e-19!604;UBERON:0000025!1.21e-18!194;UBERON:0000922!1.30e-18!612;UBERON:0000481!5.94e-18!347;UBERON:0000064!1.37e-13!219;UBERON:0000062!2.76e-12!511;UBERON:0000475!1.61e-11!365;UBERON:0003914!2.23e-11!118;UBERON:0007023!4.12e-11!115;UBERON:0004119!4.20e-11!169;UBERON:0000925!4.20e-11!169;UBERON:0006595!4.20e-11!169;UBERON:0003103!1.77e-10!69;UBERON:0005177!2.84e-10!107;UBERON:0001986!6.17e-10!18;UBERON:0004638!6.17e-10!18;UBERON:0004852!6.17e-10!18;UBERON:0003104!3.32e-09!238;UBERON:0009142!3.32e-09!238;UBERON:0006914!4.91e-09!25;UBERON:0001007!5.37e-09!155;UBERON:0001555!5.37e-09!155;UBERON:0007026!5.37e-09!155;UBERON:0000487!1.54e-08!22;UBERON:0004121!2.14e-08!169;UBERON:0004921!4.62e-08!129;UBERON:0004185!4.62e-08!129;UBERON:0000077!1.94e-07!130;UBERON:0000924!2.47e-07!173;UBERON:0006601!2.47e-07!173;UBERON:0005743!3.50e-07!86;UBERON:0000055!3.80e-07!69;UBERON:0002100!5.55e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.73e-10;18!UBERON:0001986;3.73e-10;18!UBERON:0004852;3.73e-10;18!UBERON:0006914;5.47e-09;25!UBERON:0000487;1.09e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.65e-24,240;UBERON:0000483,9.28e-19,306;UBERON:0000119,7.22e-18,309;UBERON:0000025,8.60e-18,192;UBERON:0005423,1.33e-16,581;UBERON:0000922,5.10e-16,592;UBERON:0002050,4.76e-15,564;UBERON:0000923,1.16e-14,560;UBERON:0010316,1.16e-14,560;UBERON:0005291,1.16e-14,560;UBERON:0006598,1.16e-14,560;UBERON:0010317,1.16e-14,560;UBERON:0002532,1.16e-14,560;UBERON:0011216,8.20e-13,223;UBERON:0007023,8.00e-12,114;UBERON:0004119,3.49e-11,160;UBERON:0000925,3.49e-11,160;UBERON:0006595,3.49e-11,160;UBERON:0003914,3.91e-11,117;UBERON:0003103,3.57e-10,68;UBERON:0004638,3.95e-10,18;UBERON:0001986,3.95e-10,18;UBERON:0004852,3.95e-10,18;UBERON:0006914,5.38e-09,25;UBERON:0001007,5.67e-09,145;UBERON:0001555,5.67e-09,145;UBERON:0007026,5.67e-09,145;UBERON:0000487,1.06e-08,22;UBERON:0005177,1.81e-08,101;UBERON:0004921,3.41e-08,118;UBERON:0010314,6.52e-08,132;UBERON:0000055,1.59e-07,68;UBERON:0004872,5.79e-07,83;UBERON:0001041,9.19e-07,87 | |||
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| ||
|short_description=p1@TRIM47 | |||
}} | }} |
Latest revision as of 13:11, 17 September 2015
Short description: | p1@TRIM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM47_5end |
Coexpression cluster: | C3678_Mast_Mesenchymal_Renal_breast_Synoviocyte_myeloma_CD14 |
Association with transcript: | 0bp_to_ENST00000254816, NM_033452, uc002jpw.2_5end |
EntrezGene: | TRIM47 |
HGNC: | 19020 |
UniProt: | Q96LD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.36e-19 | 45 |
endothelial cell | 5.11e-19 | 36 |
lining cell | 2.69e-18 | 58 |
barrier cell | 2.69e-18 | 58 |
epithelial cell | 3.74e-16 | 253 |
endothelial cell of vascular tree | 8.44e-13 | 24 |
embryonic cell | 1.35e-10 | 250 |
blood vessel endothelial cell | 3.95e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.95e-10 | 18 |
mesodermal cell | 1.31e-09 | 121 |
squamous epithelial cell | 2.81e-07 | 63 |