FFCP PHASE1:Hg19::chr17:64224174..64224204,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:64224174..64224204,- to FFCP PHASE1:Hg19::chr17:64224174..64224204,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=350 | |EntrezGene=350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=616 | |HGNC=616 | ||
|TSSclassifier=strong | |||
|UniProt=D9IWP9 | |UniProt=D9IWP9 | ||
|association_with_transcript=109bp_to_HM212425_5end | |||
|cluster_id=chr17:64224174..64224204,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_APOH_5end | |||
|id=chr17:64224174..64224204,- | |||
|ontology_enrichment_celltype=CL:0000181!3.58e-30!12;CL:0000417!3.58e-30!12;CL:0000668!3.58e-30!12;CL:0000414!3.58e-30!12;CL:0000412!3.58e-30!12;CL:0000182!3.58e-30!12;CL:0000223!1.34e-12!59;CL:0002563!9.90e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.18e-49;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.18e-49,12;CL:0000223,1.31e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-37;11!UBERON:0009497;1.11e-31;13!UBERON:0001041;8.09e-14;30!UBERON:0003104;2.37e-13;31!CL:0000223;3.42e-10;58 | |||
|ontology_enrichment_disease=DOID:178!4.91e-11!1;DOID:326!4.91e-11!1;DOID:3978!4.91e-11!1;DOID:3394!4.91e-11!1;DOID:5844!4.91e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.25e-33!19;UBERON:0006925!2.25e-33!19;UBERON:0008836!2.25e-33!19;UBERON:0008835!1.04e-28!22;UBERON:0003894!1.04e-28!22;UBERON:0009854!2.01e-27!23;UBERON:0007499!3.67e-25!25;UBERON:0009497!3.67e-25!25;UBERON:0000015!3.67e-25!25;UBERON:0002423!3.67e-25!25;UBERON:0006235!3.67e-25!25;UBERON:0004161!3.67e-25!25;UBERON:0005057!3.68e-24!26;UBERON:0009856!3.68e-24!26;UBERON:0003929!6.25e-21!54;UBERON:0002365!4.04e-20!31;UBERON:0002330!4.04e-20!31;UBERON:0002368!1.02e-17!35;UBERON:0000949!1.43e-13!45;UBERON:0005911!3.12e-13!82;UBERON:0002530!9.60e-13!59;UBERON:0005172!6.29e-11!55;UBERON:0005173!6.29e-11!55;UBERON:0001242!9.90e-11!4;UBERON:0001262!9.90e-11!4;UBERON:0004786!9.90e-11!4;UBERON:0004808!9.90e-11!4;UBERON:0001277!9.90e-11!4;UBERON:0002417!9.33e-10!61;UBERON:0000916!9.33e-10!61;UBERON:0003350!9.20e-09!5;UBERON:0004921!9.88e-08!129;UBERON:0004185!9.88e-08!129;UBERON:0002405!2.77e-07!115;UBERON:0000490!3.47e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;2.14e-32;31!UBERON:0002330;2.14e-32;31!UBERON:0002368;1.39e-28;33!UBERON:0000949;6.83e-21;43!UBERON:0005172;1.69e-12;52!UBERON:0005173;1.69e-12;52!UBERON:0002417;5.73e-11;58!UBERON:0000916;5.73e-11;58!UBERON:0002530;7.55e-11;57!UBERON:0001007;5.36e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-55,19;UBERON:0006925,3.89e-55,19;UBERON:0008836,3.89e-55,19;UBERON:0008835,1.39e-47,22;UBERON:0003894,1.39e-47,22;UBERON:0009854,1.68e-45,23;UBERON:0007499,7.73e-42,25;UBERON:0009497,7.73e-42,25;UBERON:0000015,7.73e-42,25;UBERON:0002423,7.73e-42,25;UBERON:0006235,7.73e-42,25;UBERON:0004161,7.73e-42,25;UBERON:0009856,3.23e-40,26;UBERON:0002365,1.12e-33,31;UBERON:0002330,1.12e-33,31;UBERON:0002368,8.69e-30,35;UBERON:0003929,3.78e-24,54;UBERON:0000949,4.45e-23,45;UBERON:0005172,3.71e-19,54;UBERON:0005173,3.71e-19,54;UBERON:0002530,1.71e-17,59;UBERON:0002417,3.42e-17,60;UBERON:0000916,3.42e-17,60;UBERON:0005911,1.07e-15,82;UBERON:0001041,1.09e-11,87;UBERON:0004921,1.35e-10,118;UBERON:0005177,5.49e-10,101;UBERON:0009569,6.05e-09,112;UBERON:0003914,1.55e-08,117;UBERON:0001007,1.71e-08,145;UBERON:0001555,1.71e-08,145;UBERON:0007026,1.71e-08,145;UBERON:0000490,2.29e-08,148;UBERON:0005256,3.70e-08,122;UBERON:0004119,1.26e-07,160;UBERON:0000925,1.26e-07,160;UBERON:0006595,1.26e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,109.009329946775,49.1413608338813,22.4500164538934,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.956262698651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,5.19969003227676,7.00534796239915,5.45968705218898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9569694159658,14.5757577803443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,109.009329946775,49.1413608338813,22.4500164538934,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.956262698651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,5.19969003227676,7.00534796239915,5.45968705218898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9569694159658,14.5757577803443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@APOH | |||
}} | }} |
Latest revision as of 21:11, 16 September 2015
Short description: | p2@APOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 109bp_to_HM212425_5end |
EntrezGene: | APOH |
HGNC: | 616 |
UniProt: | D9IWP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.18e-49 | 12 |
endodermal cell | 1.31e-13 | 58 |