FFCP PHASE1:Hg19::chr17:43861631..43861669,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:43861631..43861669,+ to FFCP PHASE1:Hg19::chr17:43861631..43861669,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1394 | |EntrezGene=1394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2357 | |HGNC=2357 | ||
|TSSclassifier=strong | |||
|UniProt=P34998 | |UniProt=P34998 | ||
|association_with_transcript=0bp_to_ENST00000314537,ENST00000347197,ENST00000352855,ENST00000398285,NM_001145146,NM_001145147,NM_001145148,NM_004382,uc002ijm.2,uc002ijn.2,uc010dao.2,uc010dap.2,uc010daq.2,uc010dar.2_5end | |||
|cluster_id=chr17:43861631..43861669,+ | |||
|coexpression_cluster_id=C2412 | |||
|description=CAGE_peak_2_at_CRHR1_5end | |||
|id=chr17:43861631..43861669,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.34e-08;2!CL:0000242;4.34e-08;2!CL:0000453;9.15e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.63e-08,2;CL:0000453,8.95e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.90e-13;82!UBERON:0006215;1.03e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.04e-59!57;UBERON:0005068!2.04e-59!57;UBERON:0006241!2.04e-59!57;UBERON:0007135!2.04e-59!57;UBERON:0001017!5.02e-58!82;UBERON:0005743!7.57e-57!86;UBERON:0000073!3.93e-54!94;UBERON:0001016!3.93e-54!94;UBERON:0000955!4.16e-51!69;UBERON:0006238!4.16e-51!69;UBERON:0002616!2.70e-49!59;UBERON:0002346!2.31e-46!90;UBERON:0002780!4.65e-46!41;UBERON:0001890!4.65e-46!41;UBERON:0006240!4.65e-46!41;UBERON:0003075!1.76e-45!86;UBERON:0007284!1.76e-45!86;UBERON:0003080!1.04e-44!42;UBERON:0001893!9.63e-42!34;UBERON:0007023!1.33e-41!115;UBERON:0002020!1.67e-41!34;UBERON:0003528!1.67e-41!34;UBERON:0002791!4.29e-40!33;UBERON:0001869!9.57e-39!32;UBERON:0002619!1.35e-36!22;UBERON:0001950!2.09e-33!20;UBERON:0003056!4.01e-33!61;UBERON:0000956!1.69e-31!25;UBERON:0000203!1.69e-31!25;UBERON:0000924!4.28e-31!173;UBERON:0006601!4.28e-31!173;UBERON:0004121!5.56e-30!169;UBERON:0000153!1.32e-28!129;UBERON:0007811!1.32e-28!129;UBERON:0000033!3.25e-28!123;UBERON:0003076!3.11e-15!15;UBERON:0003057!3.11e-15!15;UBERON:0002420!1.04e-11!9;UBERON:0007245!1.04e-11!9;UBERON:0010009!1.04e-11!9;UBERON:0010011!1.04e-11!9;UBERON:0000454!1.04e-11!9;UBERON:0000200!1.37e-11!6;UBERON:0001871!1.94e-11!7;UBERON:0004733!2.57e-11!12;UBERON:0002028!2.57e-11!12;UBERON:0007277!2.57e-11!12;UBERON:0002308!2.64e-11!9;UBERON:0000125!2.64e-11!9;UBERON:0000025!6.79e-11!194;UBERON:0004732!2.78e-10!13;UBERON:0002298!3.46e-10!8;UBERON:0002021!3.55e-10!5;UBERON:0000064!4.10e-10!219;UBERON:0001872!5.04e-10!5;UBERON:0000349!1.10e-09!5;UBERON:0009663!1.48e-08!7;UBERON:0004111!3.99e-08!241;UBERON:0002680!2.48e-07!9;UBERON:0001895!2.48e-07!9;UBERON:0010092!2.48e-07!9;UBERON:0000477!3.09e-07!286;UBERON:0000483!3.60e-07!309;UBERON:0000922!4.39e-07!612;UBERON:0000119!5.82e-07!312;UBERON:0000062!8.56e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.46e-65;22!UBERON:0001950;2.98e-59;20!UBERON:0000956;2.33e-57;25!UBERON:0000203;2.33e-57;25!UBERON:0001869;5.43e-56;32!UBERON:0002791;8.01e-55;32!UBERON:0003528;2.71e-53;34!UBERON:0002020;2.71e-53;34!UBERON:0001893;8.26e-53;34!UBERON:0002780;6.52e-45;41!UBERON:0001890;6.52e-45;41!UBERON:0000073;1.17e-42;53!UBERON:0002616;1.17e-42;53!UBERON:0000955;9.15e-31;68!UBERON:0001017;2.92e-28;75!UBERON:0001016;2.15e-25;83!UBERON:0000200;2.33e-21;6!UBERON:0002021;7.40e-19;5!UBERON:0001872;3.56e-18;5!UBERON:0004733;6.08e-14;12!UBERON:0002028;6.08e-14;12!UBERON:0001871;3.26e-13;6!UBERON:0004732;8.58e-13;13!UBERON:0000349;8.50e-12;5!UBERON:0001870;1.13e-11;3!UBERON:0007023;2.94e-10;114!UBERON:0002680;3.20e-10;9!UBERON:0001895;3.20e-10;9!UBERON:0011216;6.36e-10;132!UBERON:0002420;1.31e-09;9!UBERON:0007245;1.31e-09;9!UBERON:0010009;1.31e-09;9!UBERON:0010011;1.31e-09;9!UBERON:0000454;1.31e-09;9!UBERON:0000125;2.82e-09;9!UBERON:0002308;2.82e-09;9!UBERON:0002298;3.58e-09;6!UBERON:0002702;2.80e-08;2!UBERON:0002771;4.50e-08;2!UBERON:0009663;5.54e-08;7!UBERON:0001954;6.93e-08;2!UBERON:0003022;6.93e-08;2!UBERON:0002421;6.93e-08;2!UBERON:0002600;6.93e-08;2!UBERON:0001875;1.10e-07;2!UBERON:0006514;1.10e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.70e-75,81;UBERON:0000073,1.16e-73,53;UBERON:0002616,1.16e-73,53;UBERON:0001049,1.86e-73,56;UBERON:0005068,1.86e-73,56;UBERON:0006241,1.86e-73,56;UBERON:0007135,1.86e-73,56;UBERON:0001016,2.21e-70,89;UBERON:0000955,5.44e-70,68;UBERON:0006238,5.44e-70,68;UBERON:0002619,1.52e-65,22;UBERON:0001893,1.03e-63,34;UBERON:0003528,1.91e-63,34;UBERON:0002020,1.91e-63,34;UBERON:0001869,8.01e-63,32;UBERON:0002791,1.28e-62,32;UBERON:0002780,1.51e-60,41;UBERON:0001890,1.51e-60,41;UBERON:0003080,1.51e-60,41;UBERON:0006240,1.51e-60,41;UBERON:0001950,3.32e-59,20;UBERON:0000956,2.41e-57,25;UBERON:0000203,2.41e-57,25;UBERON:0003075,9.09e-54,82;UBERON:0007284,9.09e-54,82;UBERON:0002346,7.15e-51,86;UBERON:0010371,1.25e-45,104;UBERON:0003056,5.43e-45,61;UBERON:0004121,7.00e-38,171;UBERON:0000924,7.00e-38,171;UBERON:0006601,7.00e-38,171;UBERON:0007023,2.69e-32,114;UBERON:0010314,5.23e-32,132;UBERON:0011216,1.20e-26,223;UBERON:0000200,2.10e-21,6;UBERON:0002021,1.34e-18,5;UBERON:0001872,2.67e-18,5;UBERON:0000025,1.12e-16,192;UBERON:0003076,5.11e-14,15;UBERON:0003057,5.11e-14,15;UBERON:0004733,6.88e-14,12;UBERON:0002028,6.88e-14,12;UBERON:0007277,6.88e-14,12;UBERON:0001871,2.66e-13,6;UBERON:0004732,9.61e-13,13;UBERON:0000349,7.81e-12,5;UBERON:0001870,1.17e-11,3;UBERON:0004111,1.23e-11,240;UBERON:0000483,3.16e-10,306;UBERON:0002680,3.21e-10,9;UBERON:0001895,3.21e-10,9;UBERON:0010092,3.21e-10,9;UBERON:0000119,4.88e-10,309;UBERON:0002420,1.44e-09,9;UBERON:0007245,1.44e-09,9;UBERON:0010009,1.44e-09,9;UBERON:0010011,1.44e-09,9;UBERON:0000454,1.44e-09,9;UBERON:0000125,3.46e-09,9;UBERON:0002308,3.46e-09,9;UBERON:0002298,4.29e-09,6;UBERON:0002702,3.02e-08,2;UBERON:0002771,4.19e-08,2;UBERON:0009663,6.10e-08,7;UBERON:0001954,6.46e-08,2;UBERON:0003022,6.46e-08,2;UBERON:0002421,6.46e-08,2;UBERON:0002600,6.46e-08,2;UBERON:0001875,1.35e-07,2;UBERON:0006514,1.35e-07,2 | |||
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| ||
|short_description=p2@CRHR1 | |||
}} | }} |
Latest revision as of 02:06, 25 September 2015
Short description: | p2@CRHR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRHR1_5end |
Coexpression cluster: | C2412_neuroblastoma_cerebellum_Neurons_migratory_thalamus_parietal_amygdala |
Association with transcript: | 0bp_to_ENST00000314537, ENST00000347197, ENST00000352855, ENST00000398285, NM_001145146, NM_001145147, NM_001145148, NM_004382, uc002ijm.2, uc002ijn.2, uc010dao.2, uc010dap.2, uc010daq.2, uc010dar.2_5end |
EntrezGene: | CRHR1 |
HGNC: | 2357 |
UniProt: | P34998 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.63e-08 | 2 |
Langerhans cell | 8.95e-08 | 5 |