FFCP PHASE1:Hg19::chr17:42984746..42984762,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42984746..42984762,- to FFCP PHASE1:Hg19::chr17:42984746..42984762,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_BC012228_5end | |||
|cluster_id=chr17:42984746..42984762,- | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_17_at_GFAP_5end | |||
|id=chr17:42984746..42984762,- | |||
|ontology_enrichment_celltype=CL:0000128!1.42e-12!7;CL:0000126!1.42e-12!7;CL:0000127!1.42e-12!7;CL:0002453!1.42e-12!7;CL:0002605!1.01e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.44e-17;3!CL:0000128;1.01e-07;7!CL:0000126;1.01e-07;7!CL:0000127;1.01e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.66e-17,3;CL:0000128,1.05e-07,7;CL:0000126,1.05e-07,7;CL:0000127,1.05e-07,7;CL:0002453,1.05e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.98e-19;3!UBERON:0003057;3.98e-19;3!UBERON:0006601;2.32e-13;82!UBERON:0010122;5.39e-12;2!UBERON:0005425;1.64e-07;1!UBERON:0006222;4.70e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p17@GFAP | |||
}} | }} |
Latest revision as of 23:32, 24 September 2015
Short description: | p17@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_GFAP_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -41bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.66e-17 | 3 |
oligodendrocyte | 1.05e-07 | 7 |
macroglial cell | 1.05e-07 | 7 |
astrocyte | 1.05e-07 | 7 |
oligodendrocyte precursor cell | 1.05e-07 | 7 |