FFCP PHASE1:Hg19::chr17:42984392..42984406,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42984392..42984406,- to FFCP PHASE1:Hg19::chr17:42984392..42984406,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=298bp_to_BC012228_5end | |||
|cluster_id=chr17:42984392..42984406,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GFAP_5end | |||
|id=chr17:42984392..42984406,- | |||
|ontology_enrichment_celltype=CL:0000128!5.89e-11!7;CL:0000126!5.89e-11!7;CL:0000127!5.89e-11!7;CL:0002453!5.89e-11!7;CL:0002605!1.50e-10!3;CL:0002319!3.85e-09!25;CL:0000047!6.09e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.96e-12;3!CL:0002319;3.07e-09;25!CL:0000128;6.27e-09;7!CL:0000126;6.27e-09;7!CL:0000127;6.27e-09;7!CL:0000047;1.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.96e-12,3;CL:0000047,1.14e-10,8;CL:0002319,3.09e-09,25;CL:0000128,6.47e-09,7;CL:0000126,6.47e-09,7;CL:0000127,6.47e-09,7;CL:0002453,6.47e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-18;82!UBERON:0006241;1.09e-12;3!UBERON:0003057;1.09e-12;3!UBERON:0010122;1.29e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.13e-115,56;UBERON:0005068,1.13e-115,56;UBERON:0006241,1.13e-115,56;UBERON:0007135,1.13e-115,56;UBERON:0001017,2.37e-109,81;UBERON:0000073,8.39e-105,53;UBERON:0002616,8.39e-105,53;UBERON:0001016,7.99e-102,89;UBERON:0000955,2.25e-87,68;UBERON:0006238,2.25e-87,68;UBERON:0002780,4.80e-81,41;UBERON:0001890,4.80e-81,41;UBERON:0003080,4.80e-81,41;UBERON:0006240,4.80e-81,41;UBERON:0003528,1.16e-80,34;UBERON:0002020,1.16e-80,34;UBERON:0003075,3.53e-80,82;UBERON:0007284,3.53e-80,82;UBERON:0001893,7.78e-80,34;UBERON:0002346,5.05e-76,86;UBERON:0002791,1.40e-73,32;UBERON:0001869,5.83e-73,32;UBERON:0010371,3.08e-61,104;UBERON:0003056,5.88e-56,61;UBERON:0000956,1.02e-50,25;UBERON:0000203,1.02e-50,25;UBERON:0007023,6.82e-50,114;UBERON:0004121,9.37e-49,171;UBERON:0000924,9.37e-49,171;UBERON:0006601,9.37e-49,171;UBERON:0010314,9.52e-49,132;UBERON:0002619,9.78e-41,22;UBERON:0011216,2.80e-38,223;UBERON:0001950,1.55e-34,20;UBERON:0003076,7.24e-34,15;UBERON:0003057,7.24e-34,15;UBERON:0000125,3.75e-32,9;UBERON:0002308,3.75e-32,9;UBERON:0002420,1.67e-31,9;UBERON:0007245,1.67e-31,9;UBERON:0010009,1.67e-31,9;UBERON:0010011,1.67e-31,9;UBERON:0000454,1.67e-31,9;UBERON:0000025,5.06e-27,192;UBERON:0004732,8.73e-27,13;UBERON:0009663,5.16e-25,7;UBERON:0004733,1.30e-23,12;UBERON:0002028,1.30e-23,12;UBERON:0007277,1.30e-23,12;UBERON:0002298,1.88e-22,6;UBERON:0000200,7.64e-21,6;UBERON:0004111,1.28e-19,240;UBERON:0000349,7.88e-18,5;UBERON:0000369,1.01e-14,4;UBERON:0002435,1.01e-14,4;UBERON:0000204,1.01e-14,4;UBERON:0010082,1.01e-14,4;UBERON:0000483,3.48e-14,306;UBERON:0002680,4.14e-14,9;UBERON:0001895,4.14e-14,9;UBERON:0010092,4.14e-14,9;UBERON:0000119,5.99e-14,309;UBERON:0002240,1.11e-12,3;UBERON:0005174,1.11e-12,3;UBERON:0001137,1.11e-12,3;UBERON:0001871,1.25e-12,6;UBERON:0001896,2.56e-12,3;UBERON:0005290,2.56e-12,3;UBERON:0010096,2.56e-12,3;UBERON:0000988,7.00e-12,3;UBERON:0005383,7.82e-12,3;UBERON:0005382,7.82e-12,3;UBERON:0002021,9.01e-12,5;UBERON:0002148,7.29e-09,2;UBERON:0006331,7.29e-09,2;UBERON:0009662,7.29e-09,2;UBERON:0001873,1.19e-08,2;UBERON:0010122,1.19e-08,2;UBERON:0000923,1.25e-08,560;UBERON:0010316,1.25e-08,560;UBERON:0005291,1.25e-08,560;UBERON:0006598,1.25e-08,560;UBERON:0010317,1.25e-08,560;UBERON:0002532,1.25e-08,560;UBERON:0001897,1.29e-08,2;UBERON:0010225,1.29e-08,2;UBERON:0002050,1.74e-08,564;UBERON:0002702,1.74e-08,2;UBERON:0001954,1.94e-08,2;UBERON:0003022,1.94e-08,2;UBERON:0002421,1.94e-08,2;UBERON:0002600,1.94e-08,2;UBERON:0001875,2.34e-08,2;UBERON:0006514,2.34e-08,2;UBERON:0005162,2.51e-08,2;UBERON:0000122,2.51e-08,2;UBERON:0000922,3.34e-08,592;UBERON:0001876,3.37e-08,2;UBERON:0002771,3.76e-08,2;UBERON:0005423,6.67e-08,581;UBERON:0001872,9.51e-07,5 | |||
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| ||
|short_description=p4@GFAP | |||
}} | }} |
Latest revision as of 23:20, 24 September 2015
Short description: | p4@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 298bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.96e-12 | 3 |
neuronal stem cell | 1.14e-10 | 8 |
neural cell | 3.09e-09 | 25 |
oligodendrocyte | 6.47e-09 | 7 |
macroglial cell | 6.47e-09 | 7 |
astrocyte | 6.47e-09 | 7 |
oligodendrocyte precursor cell | 6.47e-09 | 7 |