FFCP PHASE1:Hg19::chr17:10707410..10707421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100289255 | |EntrezGene=100289255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_036581_5end | |||
|cluster_id=chr17:10707410..10707421,- | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_2_at_LOC100289255_5end | |||
|id=chr17:10707410..10707421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.98e-14;1!UBERON:0006242;7.55e-14;1!UBERON:0009143;1.61e-13;1!UBERON:0007297;1.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.61e-13;1!DOID:1357;1.61e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.83e-13,1;DOID:1357,1.83e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.10e-20!115;UBERON:0006947!1.84e-16!3;UBERON:0004054!1.84e-16!3;UBERON:0005904!1.79e-12!4;UBERON:0001155!1.13e-09!9;UBERON:0004175!6.20e-09!25;UBERON:0004921!8.73e-09!129;UBERON:0004185!8.73e-09!129;UBERON:0001042!3.11e-08!10;UBERON:0009145!3.11e-08!10;UBERON:0005409!3.71e-08!35;UBERON:0000059!6.40e-08!11;UBERON:0001723!9.23e-08!3;UBERON:0001033!9.23e-08!3;UBERON:0010056!9.23e-08!3;UBERON:0001007!1.14e-07!155;UBERON:0001555!1.14e-07!155;UBERON:0007026!1.14e-07!155;UBERON:0006562!1.72e-07!11;UBERON:0000998!8.81e-07!1;UBERON:0006868!8.81e-07!1;UBERON:0001000!9.81e-07!1;UBERON:0005352!9.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.65e-20;33!UBERON:0005409;2.33e-19;22!UBERON:0006947;8.39e-18;3!UBERON:0004054;8.39e-18;3!UBERON:0000160;2.34e-17;17!UBERON:0000998;3.98e-14;1!UBERON:0006868;3.98e-14;1!UBERON:0001000;7.55e-14;1!UBERON:0005352;7.55e-14;1!UBERON:0005904;1.34e-13;4!UBERON:0002372;1.61e-13;1!UBERON:0001764;1.61e-13;1!UBERON:0001961;1.61e-13;1!UBERON:0001825;1.61e-13;1!UBERON:0001744;1.61e-13;1!UBERON:0001042;1.61e-13;1!UBERON:0001735;1.61e-13;1!UBERON:0001155;2.79e-13;9!UBERON:0000059;5.70e-11;11!UBERON:0002108;7.89e-11;4!UBERON:0001555;1.86e-09;54!UBERON:0000341;1.45e-07;2!UBERON:0001255;2.12e-07;2!UBERON:0006562;2.12e-07;2!UBERON:0001556;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.72e-18,3;UBERON:0004054,7.72e-18,3;UBERON:0000160,2.77e-17,17;UBERON:0005409,4.93e-17,25;UBERON:0000998,4.53e-14,1;UBERON:0006868,4.53e-14,1;UBERON:0001000,5.85e-14,1;UBERON:0005352,5.85e-14,1;UBERON:0002372,1.25e-13,1;UBERON:0001961,1.25e-13,1;UBERON:0001744,1.25e-13,1;UBERON:0001735,1.25e-13,1;UBERON:0005904,1.26e-13,4;UBERON:0001764,1.83e-13,1;UBERON:0001825,1.83e-13,1;UBERON:0001155,3.04e-13,9;UBERON:0000059,6.10e-11,11;UBERON:0002108,9.16e-11,4;UBERON:0007023,1.04e-09,114;UBERON:0000341,1.45e-07,2;UBERON:0004921,1.99e-07,118;UBERON:0001255,2.12e-07,2;UBERON:0001556,2.12e-07,2;UBERON:0001007,2.70e-07,145;UBERON:0001555,2.70e-07,145;UBERON:0007026,2.70e-07,145 | |||
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|short_description=p2@LOC100289255 | |||
}} | }} |
Latest revision as of 15:29, 18 September 2015
Short description: | p2@LOC100289255 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100289255_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_NR_036581_5end |
EntrezGene: | LOC100289255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.72e-18 | 3 |
internal male genitalia | 7.72e-18 | 3 |
intestine | 2.77e-17 | 17 |
gastrointestinal system | 4.93e-17 | 25 |
seminal vesicle | 4.53e-14 | 1 |
seminal fluid secreting gland | 4.53e-14 | 1 |
vas deferens | 5.85e-14 | 1 |
spermatic cord | 5.85e-14 | 1 |
tonsil | 1.25e-13 | 1 |
mucosa-associated lymphoid tissue | 1.25e-13 | 1 |
lymphoid tissue | 1.25e-13 | 1 |
tonsillar ring | 1.25e-13 | 1 |
duct of male reproductive system | 1.26e-13 | 4 |
maxillary sinus | 1.83e-13 | 1 |
paranasal sinus | 1.83e-13 | 1 |
colon | 3.04e-13 | 9 |
large intestine | 6.10e-11 | 11 |
small intestine | 9.16e-11 | 4 |
adult organism | 1.04e-09 | 114 |
throat | 1.45e-07 | 2 |
subdivision of digestive tract | 1.99e-07 | 118 |
urinary bladder | 2.12e-07 | 2 |
lower urinary tract | 2.12e-07 | 2 |
digestive system | 2.70e-07 | 145 |
digestive tract | 2.70e-07 | 145 |
primitive gut | 2.70e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.83e-13 | 1 |
maxillary sinus cancer | 1.83e-13 | 1 |