FFCP PHASE1:Hg19::chr17:1029052..1029068,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:1029052..1029068,- to FFCP PHASE1:Hg19::chr17:1029052..1029068,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_uc010cjq.1_5end | |||
|cluster_id=chr17:1029052..1029068,- | |||
|description=CAGE_peak_9_at_ABR_5end | |||
|id=chr17:1029052..1029068,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.20e-10;10!CL:1000494;3.20e-10;10!CL:0000153;8.36e-09;9!CL:0000447;8.36e-09;9!CL:1000449;6.24e-08;15!CL:0000138;1.03e-07;6!CL:1000497;9.03e-07;17!CL:0002518;9.03e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.83e-10,10;CL:1000494,2.83e-10,10;CL:0000153,6.29e-09,9;CL:0000447,6.29e-09,9;CL:1000449,5.85e-08,15;CL:0000058,9.98e-08,6;CL:0000138,9.98e-08,6;CL:1000497,8.54e-07,17;CL:0002518,8.54e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.06e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.67e-44!57;UBERON:0005068!8.67e-44!57;UBERON:0006241!8.67e-44!57;UBERON:0007135!8.67e-44!57;UBERON:0000073!6.09e-40!94;UBERON:0001016!6.09e-40!94;UBERON:0005743!1.46e-39!86;UBERON:0001017!5.37e-39!82;UBERON:0002616!1.82e-35!59;UBERON:0003075!2.85e-34!86;UBERON:0007284!2.85e-34!86;UBERON:0002346!1.05e-33!90;UBERON:0003080!5.82e-33!42;UBERON:0000955!1.77e-32!69;UBERON:0006238!1.77e-32!69;UBERON:0002780!2.26e-32!41;UBERON:0001890!2.26e-32!41;UBERON:0006240!2.26e-32!41;UBERON:0007023!2.45e-28!115;UBERON:0001893!3.36e-27!34;UBERON:0002020!7.36e-27!34;UBERON:0003528!7.36e-27!34;UBERON:0002791!3.27e-26!33;UBERON:0001869!1.66e-25!32;UBERON:0003056!8.07e-23!61;UBERON:0000924!3.13e-22!173;UBERON:0006601!3.13e-22!173;UBERON:0004121!3.74e-22!169;UBERON:0000033!1.13e-19!123;UBERON:0000956!2.17e-19!25;UBERON:0000203!2.17e-19!25;UBERON:0000153!5.61e-19!129;UBERON:0007811!5.61e-19!129;UBERON:0000025!6.61e-19!194;UBERON:0002619!1.28e-17!22;UBERON:0000475!1.10e-16!365;UBERON:0004111!4.01e-16!241;UBERON:0001950!1.67e-15!20;UBERON:0000483!8.73e-14!309;UBERON:0000119!1.05e-13!312;UBERON:0000477!2.96e-13!286;UBERON:0003076!1.13e-11!15;UBERON:0003057!1.13e-11!15;UBERON:0000468!6.57e-10!659;UBERON:0000467!9.37e-10!625;UBERON:0000480!1.17e-09!626;UBERON:0002420!1.70e-09!9;UBERON:0007245!1.70e-09!9;UBERON:0010009!1.70e-09!9;UBERON:0010011!1.70e-09!9;UBERON:0000454!1.70e-09!9;UBERON:0004732!1.99e-09!13;UBERON:0002308!6.27e-09!9;UBERON:0000125!6.27e-09!9;UBERON:0004733!9.07e-09!12;UBERON:0002028!9.07e-09!12;UBERON:0007277!9.07e-09!12;UBERON:0000489!2.89e-08!32;UBERON:0002298!7.12e-08!8;UBERON:0000200!9.46e-08!6;UBERON:0000062!1.40e-07!511;UBERON:0004876!2.20e-07!20;UBERON:0009663!2.79e-07!7;UBERON:0000922!3.45e-07!612;UBERON:0002050!3.55e-07!605;UBERON:0005423!3.55e-07!605;UBERON:0000349!4.74e-07!5;UBERON:0000923!6.06e-07!604;UBERON:0005291!6.06e-07!604;UBERON:0006598!6.06e-07!604;UBERON:0002532!6.06e-07!604;UBERON:0000481!7.69e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.12e-32;34!UBERON:0002780;2.25e-32;41!UBERON:0001890;2.25e-32;41!UBERON:0003528;3.12e-31;34!UBERON:0002020;3.12e-31;34!UBERON:0001869;4.28e-31;32!UBERON:0002791;1.12e-30;32!UBERON:0000073;3.17e-30;53!UBERON:0002616;3.17e-30;53!UBERON:0002619;1.39e-26;22!UBERON:0000956;4.88e-25;25!UBERON:0000203;4.88e-25;25!UBERON:0001950;3.73e-23;20!UBERON:0001017;2.22e-20;75!UBERON:0000955;4.62e-18;68!UBERON:0001016;1.27e-16;83!UBERON:0002420;2.28e-14;9!UBERON:0007245;2.28e-14;9!UBERON:0010009;2.28e-14;9!UBERON:0010011;2.28e-14;9!UBERON:0000454;2.28e-14;9!UBERON:0000125;1.98e-13;9!UBERON:0002308;1.98e-13;9!UBERON:0000200;1.08e-11;6!UBERON:0004732;7.31e-11;13!UBERON:0009663;9.06e-11;7!UBERON:0000349;1.61e-10;5!UBERON:0004211;3.20e-10;10!UBERON:0009773;3.20e-10;10!UBERON:0001231;3.20e-10;10!UBERON:0004810;3.20e-10;10!UBERON:0002298;3.85e-10;6!UBERON:0001894;4.21e-10;7!UBERON:0004733;8.14e-10;12!UBERON:0002028;8.14e-10;12!UBERON:0007023;5.90e-09;114!UBERON:0006555;6.24e-08;15!UBERON:0004819;6.24e-08;15!UBERON:0001285;6.24e-08;15!UBERON:0007684;6.24e-08;15!UBERON:0001871;2.56e-07;6!UBERON:0000369;5.01e-07;4!UBERON:0002435;5.01e-07;4!UBERON:0000204;5.01e-07;4!UBERON:0001870;8.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.06e-59,56;UBERON:0005068,2.06e-59,56;UBERON:0006241,2.06e-59,56;UBERON:0007135,2.06e-59,56;UBERON:0001017,1.98e-54,81;UBERON:0000073,2.07e-54,53;UBERON:0002616,2.07e-54,53;UBERON:0001016,4.40e-53,89;UBERON:0002780,6.59e-46,41;UBERON:0001890,6.59e-46,41;UBERON:0003080,6.59e-46,41;UBERON:0006240,6.59e-46,41;UBERON:0000955,3.81e-43,68;UBERON:0006238,3.81e-43,68;UBERON:0003075,2.37e-39,82;UBERON:0007284,2.37e-39,82;UBERON:0001893,1.75e-37,34;UBERON:0003528,5.76e-37,34;UBERON:0002020,5.76e-37,34;UBERON:0002346,8.36e-37,86;UBERON:0010371,6.98e-35,104;UBERON:0001869,9.40e-35,32;UBERON:0002791,3.06e-34,32;UBERON:0003056,7.35e-29,61;UBERON:0007023,1.33e-28,114;UBERON:0002619,1.49e-26,22;UBERON:0004121,2.57e-25,171;UBERON:0000924,2.57e-25,171;UBERON:0006601,2.57e-25,171;UBERON:0000956,5.55e-25,25;UBERON:0000203,5.55e-25,25;UBERON:0001950,4.03e-23,20;UBERON:0000025,4.60e-23,192;UBERON:0010314,4.97e-22,132;UBERON:0004111,8.88e-17,240;UBERON:0002420,1.64e-14,9;UBERON:0007245,1.64e-14,9;UBERON:0010009,1.64e-14,9;UBERON:0010011,1.64e-14,9;UBERON:0000454,1.64e-14,9;UBERON:0003076,3.57e-14,15;UBERON:0003057,3.57e-14,15;UBERON:0011216,9.56e-14,223;UBERON:0000483,1.06e-13,306;UBERON:0000125,1.37e-13,9;UBERON:0002308,1.37e-13,9;UBERON:0000119,2.25e-13,309;UBERON:0000200,1.14e-11,6;UBERON:0009663,6.62e-11,7;UBERON:0004732,9.15e-11,13;UBERON:0000349,1.56e-10,5;UBERON:0004810,2.83e-10,10;UBERON:0002298,5.35e-10,6;UBERON:0004733,9.96e-10,12;UBERON:0002028,9.96e-10,12;UBERON:0007277,9.96e-10,12;UBERON:0001894,1.05e-09,7;UBERON:0006222,1.05e-09,7;UBERON:0004211,5.85e-08,15;UBERON:0009773,5.85e-08,15;UBERON:0001231,5.85e-08,15;UBERON:0001285,5.85e-08,15;UBERON:0007684,5.85e-08,15;UBERON:0004208,5.85e-08,15;UBERON:0006555,2.44e-07,16;UBERON:0004819,2.44e-07,16;UBERON:0001871,2.47e-07,6;UBERON:0000369,2.77e-07,4;UBERON:0002435,2.77e-07,4;UBERON:0000204,2.77e-07,4;UBERON:0010082,2.77e-07,4;UBERON:0001870,9.13e-07,3 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,2.33930010345897,1.42800483870977,2.82109249330279,0.572471974262113,1.36874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,5.51471701699479,4.63508860674636,4.7717156823066,9.24606253575008,0,0.221729397462564,0,1.44076983047484,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,2.42998351125316,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0,0.309977343527296,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0,1.69545520927649,3.60109315301283,2.47326070172253,1.54584324027377,0.744467425326359,1.35021065793013,1.65642908774038,1.00973509697646,0.460249493211497,0.161646056818812,0,0.705264687593482,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.708875486211932,3.13454829459969,2.61570544662566,1.53353071666084,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,3.48613383440118,4.79870357673874,0,0,0,0.479249710983165,0,0,0,0.61642896765115,0.537182889719687,0,0,0,0,5.33598710867173,1.30139853857622,6.95959931499926,1.67516265334349,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,1.20303882181971,0.0920809889358963,0,0,0.131124414959424,3.15839729035188,3.85076685522074,4.70609861506113,10.2297457257282,5.48868470242954,0,0,3.23873874153209,0,3.52230368807009,3.51182841698397,0.254876273045038,0,2.46262230194396,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,1.14853107599234,0,1.6068392984416,0,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,14.1695446881001,0.532306030317022,0,5.5597265731176,1.71749864090389,0,0,0,0,0,0,0,0,0,0,0.606547444719948,1.58510321173008,0,0,2.43713489631284,0,0.272999822815972,0.424216295861138,3.39024349860728,0,1.99031692572366,1.31535265576129,0.578775534266688,0,0,0,0.563391205064483,0,0,0,1.41904425628239,1.89996871767898,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.882952955326,15.6143052215669,0,0,0,4.18420775327246,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,7.75466196876175,9.36957791434698,0,0,0,0.724999575434793,0,0,0,0,0,1.21537496453305,7.97167247232455,1.92954301800653,0,0.884634079449797,0.295547618953547,5.48463492884931,0,0,2.6932590476329,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,8.89694955344937,0,2.34264445725339,0,0,0,0.789168805698781,0,0,2.21153028699708,0.450970258243478,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.451961481561065,0,0,9.55993018933768,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,2.40168115483916,3.28572909340783,0,2.57859264851974,0,0.558564802544508,0.916641696046735,0,0,0,0,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,13.5189047267582,12.1221031439302,0,0,0,0,0,13.0611546814753,0,0,0.157363764404994,0,0,0,0,0,0,4.3439968140297,4.32110745600634,7.184921922407,0,0,0,0,0,0,2.58565912723101,3.43804764530994,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,7.08854543973589,7.19954962921583,9.13893794157449,5.16068276121064,5.43552352530576,8.07253238237985,0,0,0,0,0,0,0,0,0,0,1.51522404220071,0.50313580350515,2.66943366478961,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0.53168342911599,0.521745061811734,1.50257608997218,4.18885733385675,2.03435366602331,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,10.2311242752281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17559094704073,0,0.109209638192014,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,6.48715173474241,1.41696576325585,7.18352365757181,6.15349092722265,0,6.98488249888601,13.2410029418118,1.42769420259154,0,0,0,0.115525666150338,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,6.3485329541291,5.46754669029693,10.7477134180616,7.03915493152366,0.546974809018219,0,1.98484471355718,0,0,1.07140367175657,1.3451348888753,1.21393120847326,1.13831095675649,0,0,0,1.01954599465248,6.44573180915921,0,0,0.235479278551542,1.88538707899202,0,0,0.431855182437243,0,0.142953088353313,0,0,0,0,0,0,0,0,1.30165200803622,0.937347452350735,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,4.51509474364374,7.12911360785006,15.2156061930024,1.869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| ||
|short_description=p9@ABR | |||
}} | }} |
Latest revision as of 14:27, 18 September 2015
Short description: | p9@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_uc010cjq.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.83e-10 | 10 |
nephron tubule epithelial cell | 2.83e-10 | 10 |
GAG secreting cell | 6.29e-09 | 9 |
carbohydrate secreting cell | 6.29e-09 | 9 |
epithelial cell of nephron | 5.85e-08 | 15 |
chondroblast | 9.98e-08 | 6 |
chondrocyte | 9.98e-08 | 6 |
kidney cell | 8.54e-07 | 17 |
kidney epithelial cell | 8.54e-07 | 17 |