FFCP PHASE1:Hg19::chr16:86600458..86600461,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:86600458..86600461,+ to FFCP PHASE1:Hg19::chr16:86600458..86600461,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2303 | |EntrezGene=2303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3801 | |HGNC=3801 | ||
|TSSclassifier=strong | |||
|UniProt=Q99958 | |UniProt=Q99958 | ||
|association_with_transcript=-395bp_to_ENST00000320354,NM_005251,uc002fjq.2_5end | |||
|cluster_id=chr16:86600458..86600461,+ | |||
|description=CAGE_peak_3_at_FOXC2_5end | |||
|id=chr16:86600458..86600461,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.00e-30!180;CL:0000222!4.32e-20!119;CL:0000183!2.31e-17!59;CL:0000680!9.42e-16!57;CL:0000056!9.42e-16!57;CL:0000355!9.42e-16!57;CL:0000057!5.71e-15!75;CL:0000359!1.06e-14!32;CL:0000187!3.25e-14!54;CL:0000393!1.27e-12!60;CL:0000211!1.27e-12!60;CL:0000192!1.53e-12!42;CL:0000514!1.53e-12!42;CL:0000115!9.02e-10!35;CL:0002139!3.51e-09!24;CL:0002078!1.96e-08!44;CL:0002371!3.13e-08!591;CL:0000071!6.93e-08!18;CL:0002546!6.93e-08!18;CL:0000220!7.19e-08!246;CL:0002321!1.42e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.91e-13;32!CL:0000115;4.44e-09;36!CL:0000192;7.73e-09;43!CL:1000449;1.30e-08;15!CL:0002556;8.24e-08;6!CL:0002139;1.62e-07;24!CL:0000669;1.95e-07;4!CL:1000497;2.74e-07;17!CL:0002518;2.74e-07;17!CL:1000507;5.43e-07;10!CL:1000494;5.43e-07;10!CL:0002595;5.58e-07;5!CL:0000071;5.88e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.50e-15,121;CL:0000359,1.31e-13,32;CL:0000192,1.62e-11,43;CL:0000514,1.62e-11,43;CL:0000680,2.22e-11,58;CL:0000056,2.22e-11,58;CL:0000355,2.22e-11,58;CL:0000115,2.94e-10,36;CL:0000187,3.31e-10,55;CL:0000393,2.91e-09,61;CL:0000211,2.91e-09,61;CL:0000057,3.59e-09,76;CL:1000449,1.25e-08,15;CL:0002078,3.64e-08,45;CL:0002556,5.59e-08,6;CL:0002139,1.04e-07,24;CL:0000669,1.86e-07,4;CL:1000497,2.64e-07,17;CL:0002518,2.64e-07,17;CL:0000071,3.91e-07,18;CL:0002546,3.91e-07,18;CL:1000507,4.31e-07,10;CL:1000494,4.31e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;7.73e-09;43!CL:0002546;5.88e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.02e-31!79;UBERON:0007798!2.02e-31!79;UBERON:0004535!2.92e-24!110;UBERON:0001009!3.29e-24!113;UBERON:0000055!4.90e-24!69;UBERON:0001981!1.08e-23!60;UBERON:0007500!1.08e-23!60;UBERON:0004537!1.08e-23!60;UBERON:0006965!1.08e-23!60;UBERON:0004872!3.13e-22!84;UBERON:0000914!7.26e-21!83;UBERON:0002329!7.26e-21!83;UBERON:0003077!7.26e-21!83;UBERON:0003059!7.26e-21!83;UBERON:0007282!7.26e-21!83;UBERON:0009618!7.26e-21!83;UBERON:0007285!7.26e-21!83;UBERON:0003914!6.97e-20!118;UBERON:0001637!1.47e-18!42;UBERON:0003509!1.47e-18!42;UBERON:0004572!1.47e-18!42;UBERON:0004290!4.46e-16!70;UBERON:0002385!4.02e-15!63;UBERON:0001015!4.02e-15!63;UBERON:0000383!4.02e-15!63;UBERON:0001134!5.53e-15!61;UBERON:0002036!5.53e-15!61;UBERON:0003082!5.53e-15!61;UBERON:0005256!7.48e-15!143;UBERON:0004573!1.69e-13!33;UBERON:0004571!1.69e-13!33;UBERON:0000477!7.40e-13!286;UBERON:0000486!4.54e-12!82;UBERON:0000119!1.11e-11!312;UBERON:0000475!3.88e-11!365;UBERON:0002100!5.36e-11!216;UBERON:0000483!9.55e-11!309;UBERON:0000481!1.85e-09!347;UBERON:0000025!2.18e-09!194;UBERON:0000490!2.95e-09!138;UBERON:0000468!2.98e-09!659;UBERON:0004111!1.63e-08!241;UBERON:0000467!3.22e-08!625;UBERON:0000480!4.26e-08!626;UBERON:0003104!4.94e-08!238;UBERON:0009142!4.94e-08!238;UBERON:0002200!5.16e-08!11;UBERON:0006876!5.16e-08!11;UBERON:0001986!6.93e-08!18;UBERON:0004638!6.93e-08!18;UBERON:0004852!6.93e-08!18;UBERON:0000926!1.56e-07!448;UBERON:0004120!1.56e-07!448;UBERON:0006603!1.56e-07!448;UBERON:0000947!3.73e-07!21;UBERON:0010191!3.73e-07!21;UBERON:0003103!3.95e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.39e-14;42!UBERON:0003509;6.39e-14;42!UBERON:0004572;6.39e-14;42!UBERON:0003914;3.28e-12;74!UBERON:0002049;1.97e-11;75!UBERON:0007798;1.97e-11;75!UBERON:0007500;2.06e-11;56!UBERON:0001981;2.06e-11;56!UBERON:0004537;2.06e-11;56!UBERON:0004573;4.47e-10;33!UBERON:0004571;4.47e-10;33!UBERON:0000075;4.90e-10;16!UBERON:0006876;3.76e-09;11!UBERON:0001434;1.09e-08;36!UBERON:0006555;1.30e-08;15!UBERON:0004819;1.30e-08;15!UBERON:0001285;1.30e-08;15!UBERON:0007684;1.30e-08;15!UBERON:0000055;1.34e-08;65!UBERON:0004765;7.02e-08;26!UBERON:0001758;8.24e-08;6!UBERON:0003672;8.24e-08;6!UBERON:0011135;3.59e-07;5!UBERON:0002216;3.59e-07;5!UBERON:0011134;3.59e-07;5!UBERON:0002209;3.59e-07;5!UBERON:0002213;3.59e-07;5!UBERON:0007844;3.59e-07;5!UBERON:0011138;3.59e-07;5!UBERON:0001130;3.59e-07;5!UBERON:0001066;3.59e-07;5!UBERON:0001468;3.59e-07;5!UBERON:0003513;4.86e-07;7!UBERON:0004211;5.43e-07;10!UBERON:0009773;5.43e-07;10!UBERON:0001231;5.43e-07;10!UBERON:0004810;5.43e-07;10!UBERON:0003834;5.58e-07;5!UBERON:0001533;5.58e-07;5!UBERON:0004638;5.88e-07;18!UBERON:0001986;5.88e-07;18!UBERON:0004852;5.88e-07;18 | |||
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| ||
|short_description=p3@FOXC2 | |||
}} | }} |
Latest revision as of 06:51, 18 September 2015
Short description: | p3@FOXC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -395bp_to_ENST00000320354, NM_005251, uc002fjq.2_5end |
EntrezGene: | FOXC2 |
HGNC: | 3801 |
UniProt: | Q99958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.50e-15 | 121 |
vascular associated smooth muscle cell | 1.31e-13 | 32 |
smooth muscle cell | 1.62e-11 | 43 |
smooth muscle myoblast | 1.62e-11 | 43 |
muscle precursor cell | 2.22e-11 | 58 |
myoblast | 2.22e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.22e-11 | 58 |
endothelial cell | 2.94e-10 | 36 |
muscle cell | 3.31e-10 | 55 |
electrically responsive cell | 2.91e-09 | 61 |
electrically active cell | 2.91e-09 | 61 |
fibroblast | 3.59e-09 | 76 |
epithelial cell of nephron | 1.25e-08 | 15 |
meso-epithelial cell | 3.64e-08 | 45 |
fibroblast of periodontium | 5.59e-08 | 6 |
endothelial cell of vascular tree | 1.04e-07 | 24 |
pericyte cell | 1.86e-07 | 4 |
kidney cell | 2.64e-07 | 17 |
kidney epithelial cell | 2.64e-07 | 17 |
blood vessel endothelial cell | 3.91e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.91e-07 | 18 |
kidney tubule cell | 4.31e-07 | 10 |
nephron tubule epithelial cell | 4.31e-07 | 10 |