FFCP PHASE1:Hg19::chr16:62070355..62070364,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:62070355..62070364,- to FFCP PHASE1:Hg19::chr16:62070355..62070364,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1006 | |EntrezGene=1006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1767 | |HGNC=1767 | ||
|TSSclassifier=strong | |||
|UniProt=P55286 | |UniProt=P55286 | ||
|association_with_transcript=-319bp_to_uc002eog.1_5end | |||
|cluster_id=chr16:62070355..62070364,- | |||
|coexpression_cluster_id=C3579 | |||
|description=CAGE_peak_3_at_CDH8_5end | |||
|id=chr16:62070355..62070364,- | |||
|ontology_enrichment_celltype=CL:0002322!6.35e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.00e-14;2!UBERON:0005425;2.35e-08;1!UBERON:0006222;5.77e-08;1!UBERON:0006601;9.15e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.35e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.35e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.56e-61!57;UBERON:0005068!1.56e-61!57;UBERON:0006241!1.56e-61!57;UBERON:0007135!1.56e-61!57;UBERON:0002780!6.58e-55!41;UBERON:0001890!6.58e-55!41;UBERON:0006240!6.58e-55!41;UBERON:0001017!2.22e-54!82;UBERON:0002020!1.19e-53!34;UBERON:0003528!1.19e-53!34;UBERON:0003080!2.45e-53!42;UBERON:0001893!2.79e-53!34;UBERON:0002791!8.26e-52!33;UBERON:0005743!4.11e-51!86;UBERON:0002616!6.16e-51!59;UBERON:0001869!2.99e-50!32;UBERON:0000073!8.56e-49!94;UBERON:0001016!8.56e-49!94;UBERON:0000955!1.13e-47!69;UBERON:0006238!1.13e-47!69;UBERON:0002346!3.45e-47!90;UBERON:0003075!1.90e-43!86;UBERON:0007284!1.90e-43!86;UBERON:0000956!4.54e-38!25;UBERON:0000203!4.54e-38!25;UBERON:0003056!2.10e-37!61;UBERON:0002619!6.21e-34!22;UBERON:0001950!2.60e-30!20;UBERON:0000033!1.05e-25!123;UBERON:0000924!1.07e-25!173;UBERON:0006601!1.07e-25!173;UBERON:0000153!5.39e-25!129;UBERON:0007811!5.39e-25!129;UBERON:0007023!6.22e-25!115;UBERON:0004121!4.24e-23!169;UBERON:0002420!2.10e-17!9;UBERON:0007245!2.10e-17!9;UBERON:0010009!2.10e-17!9;UBERON:0010011!2.10e-17!9;UBERON:0000454!2.10e-17!9;UBERON:0002308!8.13e-17!9;UBERON:0000125!8.13e-17!9;UBERON:0009663!1.17e-13!7;UBERON:0000025!2.11e-12!194;UBERON:0001871!7.76e-12!7;UBERON:0000200!9.27e-12!6;UBERON:0000349!9.13e-11!5;UBERON:0003076!4.66e-10!15;UBERON:0003057!4.66e-10!15;UBERON:0001872!6.60e-10!5;UBERON:0000369!5.76e-09!4;UBERON:0002435!5.76e-09!4;UBERON:0000204!5.76e-09!4;UBERON:0010082!5.76e-09!4;UBERON:0004111!5.95e-09!241;UBERON:0002298!4.67e-08!8;UBERON:0004732!8.21e-08!13;UBERON:0005383!3.04e-07!3;UBERON:0005382!3.04e-07!3;UBERON:0002771!6.53e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;4.21e-50;32!UBERON:0001869;8.93e-49;32!UBERON:0003528;7.00e-47;34!UBERON:0002020;7.00e-47;34!UBERON:0001893;1.55e-40;34!UBERON:0002619;1.08e-39;22!UBERON:0002780;1.47e-39;41!UBERON:0001890;1.47e-39;41!UBERON:0002420;7.06e-36;9!UBERON:0007245;7.06e-36;9!UBERON:0010009;7.06e-36;9!UBERON:0010011;7.06e-36;9!UBERON:0000454;7.06e-36;9!UBERON:0000956;7.33e-35;25!UBERON:0000203;7.33e-35;25!UBERON:0000349;2.19e-33;5!UBERON:0001950;2.50e-30;20!UBERON:0000369;3.62e-27;4!UBERON:0002435;3.62e-27;4!UBERON:0000204;3.62e-27;4!UBERON:0000073;3.09e-25;53!UBERON:0002616;3.09e-25;53!UBERON:0009663;7.86e-24;7!UBERON:0000955;1.54e-21;68!UBERON:0005383;5.97e-21;3!UBERON:0005382;5.97e-21;3!UBERON:0000125;1.64e-18;9!UBERON:0002308;1.64e-18;9!UBERON:0001871;7.63e-16;6!UBERON:0001876;1.00e-14;2!UBERON:0001873;1.00e-14;2!UBERON:0002771;1.27e-14;2!UBERON:0001017;1.52e-14;75!UBERON:0001954;3.08e-14;2!UBERON:0003022;3.08e-14;2!UBERON:0002421;3.08e-14;2!UBERON:0002600;3.08e-14;2!UBERON:0001016;5.52e-14;83!UBERON:0000200;6.12e-11;6!UBERON:0001870;4.08e-10;3!UBERON:0000941;2.35e-08;1!UBERON:0001785;2.35e-08;1!UBERON:0002464;2.35e-08;1!UBERON:0004904;2.35e-08;1!UBERON:0001021;2.35e-08;1!UBERON:0001882;5.77e-08;1!UBERON:0002022;5.77e-08;1!UBERON:0001874;5.77e-08;1!UBERON:0003112;5.77e-08;1!UBERON:0011158;5.77e-08;1!UBERON:0003128;5.77e-08;1!UBERON:0005403;5.77e-08;1!UBERON:0001703;5.77e-08;1!UBERON:0002241;5.77e-08;1!UBERON:0002346;8.55e-08;4!UBERON:0000923;8.55e-08;4!UBERON:0010316;8.55e-08;4!UBERON:0005291;8.55e-08;4!UBERON:0007023;2.76e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,8.07e-55,32;UBERON:0001869,8.07e-55,32;UBERON:0002780,2.81e-53,41;UBERON:0001890,2.81e-53,41;UBERON:0003080,2.81e-53,41;UBERON:0006240,2.81e-53,41;UBERON:0003528,1.69e-51,34;UBERON:0002020,1.69e-51,34;UBERON:0001893,1.69e-51,34;UBERON:0003056,3.02e-43,61;UBERON:0000073,1.27e-40,53;UBERON:0002616,1.27e-40,53;UBERON:0002619,1.50e-39,22;UBERON:0001049,2.73e-38,56;UBERON:0005068,2.73e-38,56;UBERON:0006241,2.73e-38,56;UBERON:0007135,2.73e-38,56;UBERON:0002346,2.66e-36,86;UBERON:0002420,1.49e-35,9;UBERON:0007245,1.49e-35,9;UBERON:0010009,1.49e-35,9;UBERON:0010011,1.49e-35,9;UBERON:0000454,1.49e-35,9;UBERON:0000956,9.78e-35,25;UBERON:0000203,9.78e-35,25;UBERON:0000955,4.26e-34,68;UBERON:0006238,4.26e-34,68;UBERON:0000349,4.20e-33,5;UBERON:0003075,2.76e-31,82;UBERON:0007284,2.76e-31,82;UBERON:0001950,3.46e-30,20;UBERON:0001017,3.80e-28,81;UBERON:0001016,6.71e-28,89;UBERON:0000369,6.49e-27,4;UBERON:0002435,6.49e-27,4;UBERON:0000204,6.49e-27,4;UBERON:0010082,6.49e-27,4;UBERON:0010371,7.06e-24,104;UBERON:0009663,1.58e-23,7;UBERON:0005383,5.08e-21,3;UBERON:0005382,5.08e-21,3;UBERON:0010314,4.99e-20,132;UBERON:0000125,2.81e-18,9;UBERON:0002308,2.81e-18,9;UBERON:0004121,1.09e-17,171;UBERON:0000924,1.09e-17,171;UBERON:0006601,1.09e-17,171;UBERON:0007023,2.38e-17,114;UBERON:0001871,7.25e-16,6;UBERON:0001876,9.74e-15,2;UBERON:0002771,1.20e-14,2;UBERON:0001873,1.37e-14,2;UBERON:0010122,1.37e-14,2;UBERON:0001954,2.89e-14,2;UBERON:0003022,2.89e-14,2;UBERON:0002421,2.89e-14,2;UBERON:0002600,2.89e-14,2;UBERON:0000200,6.04e-11,6;UBERON:0011216,5.47e-10,223;UBERON:0001870,6.00e-10,3;UBERON:0000025,1.14e-08,192;UBERON:0000941,2.19e-08,1;UBERON:0001785,2.19e-08,1;UBERON:0002464,2.19e-08,1;UBERON:0004904,2.19e-08,1;UBERON:0001021,2.19e-08,1;UBERON:0003902,2.19e-08,1;UBERON:0005425,2.19e-08,1;UBERON:0003112,3.34e-08,1;UBERON:0011158,3.34e-08,1;UBERON:0003128,3.34e-08,1;UBERON:0001703,3.34e-08,1;UBERON:0002241,3.34e-08,1;UBERON:0004761,3.34e-08,1;UBERON:0009617,3.34e-08,1;UBERON:0001874,3.58e-08,1;UBERON:0002022,7.59e-08,1;UBERON:0001882,1.21e-07,1;UBERON:0005403,1.21e-07,1 | |||
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| ||
|short_description=p3@CDH8 | |||
}} | }} |
Latest revision as of 07:22, 17 September 2015
Short description: | p3@CDH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH8_5end |
Coexpression cluster: | C3579_neuroectodermal_basal_amygdala_putamen_mesodermal_caudate_brain |
Association with transcript: | -319bp_to_uc002eog.1_5end |
EntrezGene: | CDH8 |
HGNC: | 1767 |
UniProt: | P55286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.35e-08 | 1 |