FFCP PHASE1:Hg19::chr16:57832004..57832027,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:57832004..57832027,- to FFCP PHASE1:Hg19::chr16:57832004..57832027,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3801 | |EntrezGene=3801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6326 | |HGNC=6326 | ||
|TSSclassifier=strong | |||
|UniProt=A8K6S2,Q9BVG8 | |UniProt=A8K6S2,Q9BVG8 | ||
|association_with_transcript=-75bp_to_ENST00000421376,NM_001130099,uc002emo.3,uc010cdf.2,uc010vhy.1_5end | |||
|cluster_id=chr16:57832004..57832027,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_4_at_KIFC3_5end | |||
|id=chr16:57832004..57832027,- | |||
|ontology_enrichment_celltype=CL:0000066!9.26e-15!254;CL:1000497!5.15e-07!18;CL:0002518!5.15e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000650;4.18e-11;2!CL:1000500;4.18e-11;2!CL:1000618;4.18e-11;2!CL:1001318;4.18e-11;2!CL:0002173;4.18e-11;2!CL:1000497;3.68e-10;17!CL:0002518;3.68e-10;17!CL:1000507;2.93e-08;10!CL:1000494;2.93e-08;10!CL:1000449;3.62e-08;15!CL:1000746;5.95e-07;7!CL:1000612;5.95e-07;7!CL:0000182;6.83e-07;12!CL:0002681;9.00e-07;12!CL:0002584;9.00e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.16e-11,2;CL:1000500,3.16e-11,2;CL:1000618,3.16e-11,2;CL:1001318,3.16e-11,2;CL:0002173,3.16e-11,2;CL:1000497,2.84e-10,17;CL:0002518,2.84e-10,17;CL:1000507,2.28e-08,10;CL:1000494,2.28e-08,10;CL:1000449,3.08e-08,15;CL:0000066,5.25e-07,253;CL:1000746,5.59e-07,7;CL:1000612,5.59e-07,7;CL:0000182,5.93e-07,12;CL:0002681,8.40e-07,12;CL:0002584,8.40e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.55e-07;30!UBERON:0010226;8.56e-07;1 | |||
|ontology_enrichment_disease=DOID:305!8.19e-13!106;DOID:0050687!3.99e-10!143;DOID:7!2.29e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!2.02e-15!129;UBERON:0004185!2.02e-15!129;UBERON:0004119!8.11e-15!169;UBERON:0000925!8.11e-15!169;UBERON:0006595!8.11e-15!169;UBERON:0000077!1.40e-14!130;UBERON:0001007!1.50e-14!155;UBERON:0001555!1.50e-14!155;UBERON:0007026!1.50e-14!155;UBERON:0001041!1.19e-13!98;UBERON:0001048!4.47e-12!168;UBERON:0000466!1.72e-11!126;UBERON:0005177!4.14e-11!107;UBERON:0000481!1.78e-10!347;UBERON:0003104!2.66e-10!238;UBERON:0009142!2.66e-10!238;UBERON:0005911!1.17e-09!82;UBERON:0005172!4.30e-09!55;UBERON:0005173!4.30e-09!55;UBERON:0009569!6.45e-09!113;UBERON:0000062!1.18e-08!511;UBERON:0001737!1.66e-08!9;UBERON:0003929!2.34e-08!54;UBERON:0000065!6.40e-08!53;UBERON:0002417!7.85e-08!61;UBERON:0000916!7.85e-08!61;UBERON:0006554!1.23e-07!44;UBERON:0001004!1.71e-07!72;UBERON:0000464!1.86e-07!104;UBERON:0000058!1.90e-07!26;UBERON:0008947!2.33e-07!38;UBERON:0003258!2.33e-07!38;UBERON:0001008!2.67e-07!45;UBERON:0001557!9.99e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;4.18e-11;2!UBERON:0003838;4.18e-11;2!UBERON:0003586;4.18e-11;2!UBERON:0005169;4.18e-11;2!UBERON:0002321;4.18e-11;2!UBERON:0005215;4.18e-11;2!UBERON:0002303;4.18e-11;2!UBERON:0002319;4.18e-11;2!UBERON:0000949;1.78e-09;43!UBERON:0002107;4.99e-09;19!UBERON:0006925;4.99e-09;19!UBERON:0005172;1.15e-08;52!UBERON:0005173;1.15e-08;52!UBERON:0001264;1.73e-08;10!UBERON:0004211;2.93e-08;10!UBERON:0009773;2.93e-08;10!UBERON:0001231;2.93e-08;10!UBERON:0004810;2.93e-08;10!UBERON:0006555;3.62e-08;15!UBERON:0004819;3.62e-08;15!UBERON:0001285;3.62e-08;15!UBERON:0007684;3.62e-08;15!UBERON:0002113;5.05e-07;24!UBERON:0011143;5.05e-07;24!UBERON:0002417;5.74e-07;58!UBERON:0000916;5.74e-07;58!UBERON:0000074;5.95e-07;7!UBERON:0001229;5.95e-07;7!UBERON:0002084;8.56e-07;1!UBERON:0002082;8.56e-07;1!UBERON:0001225;9.00e-07;12!UBERON:0008987;9.00e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.01e-15,101;UBERON:0000949,1.20e-11,45;UBERON:0003567,3.16e-11,2;UBERON:0003838,3.16e-11,2;UBERON:0003586,3.16e-11,2;UBERON:0005169,3.16e-11,2;UBERON:0002321,3.16e-11,2;UBERON:0005215,3.16e-11,2;UBERON:0002303,3.16e-11,2;UBERON:0002319,3.16e-11,2;UBERON:0005172,4.05e-11,54;UBERON:0005173,4.05e-11,54;UBERON:0009569,1.11e-10,112;UBERON:0002417,9.07e-10,60;UBERON:0000916,9.07e-10,60;UBERON:0002107,4.03e-09,19;UBERON:0006925,4.03e-09,19;UBERON:0008836,4.03e-09,19;UBERON:0001264,1.99e-08,10;UBERON:0002100,2.05e-08,199;UBERON:0004810,2.28e-08,10;UBERON:0004211,3.08e-08,15;UBERON:0009773,3.08e-08,15;UBERON:0001231,3.08e-08,15;UBERON:0001285,3.08e-08,15;UBERON:0007684,3.08e-08,15;UBERON:0004208,3.08e-08,15;UBERON:0008835,8.55e-08,22;UBERON:0003894,8.55e-08,22;UBERON:0006555,1.05e-07,16;UBERON:0004819,1.05e-07,16;UBERON:0009854,1.98e-07,23;UBERON:0010532,5.59e-07,7;UBERON:0000074,5.59e-07,7;UBERON:0001229,5.59e-07,7;UBERON:0001230,5.59e-07,7;UBERON:0003220,5.59e-07,7;UBERON:0005749,5.59e-07,7;UBERON:0004199,5.59e-07,7;UBERON:0004209,5.59e-07,7;UBERON:0004198,5.59e-07,7;UBERON:0001225,8.40e-07,12;UBERON:0008987,8.40e-07,12;UBERON:0007499,8.71e-07,25;UBERON:0009497,8.71e-07,25;UBERON:0000015,8.71e-07,25;UBERON:0002423,8.71e-07,25;UBERON:0006235,8.71e-07,25;UBERON:0004161,8.71e-07,25;UBERON:0002084,8.81e-07,1;UBERON:0002082,8.81e-07,1;UBERON:0010226,8.81e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0,0,0,0.850813354476611,0.886917589850256,1.93236528524877,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.473227200159376,0.674338760312407,0.723033089650446,1.21323370005633,0.653638332277218,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,1.26755034821831,2.94848165003288,1.77236972004421,0,0.122988438543114,0.514703430895577,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0.352226082707465,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,1.50719688529793,0.871533458600294,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.802025881213139,0.184161977871793,0.114814448164607,0,0,0,0.15403067420883,0.784349769176855,2.92278449306521,0.211103257785751,0,0.170093705276516,0.215915916102139,0,1.62567862526312,2.50844886927427,0.509752546090077,0,1.56712328305525,0,0,0,0,0,0.721287081534056,0.457847324091717,0.247528499761764,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,1.5625665665114,0.349839999984783,0,0,0.254253650292766,1.89110145414349,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.282706142867882,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.126373159256976,0,0,2.65861549082874,0.330991955875499,1.2557316736289,0,0,0,0.694238953340524,0.195984794828755,0,0.52418000472609,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0.916641696046735,0,1.59743200399193,0.429226048136571,2.23171457441873,0.134366944973453,0,2.32991899054908,0.630265458457789,0.329663433524666,0.13480708770837,0.688992370603241,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0.788057072991982,0.524545881349981,0.105600336519406,19.3630326479472,0.191915197319445,0,3.31045985182716,0,0.542999601753713,0,0.326587360109409,0,0,0,0,1.61207457045891,2.65013777824443,0,0,2.22412889249628,0,0.427149650270779,0.157204305099666,2.48543433208317,0,0,0,0,0,0.7520696820681,0,0.655745261419609,0.628216385000937,0,0.244052529803926,0,0,0.110929051536852,0,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0.643324774124777,3.91491437947817,0,0,0,0,2.16161013012681,1.75427239662966,0,0,1.01365464391844,0.512483037175893,0,0,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.678930119816101,0,2.47871528518004,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0.196295437002051,0,0,0.231051332300676,0,0,0.596748666348824,0,0.20170506870352,3.90757005616546,0,0,0.443568258651136,0,0,0,0,0,0.548257766857182,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0,0,0,0,2.00929529502746,0.111231401892069,0.156986185701028,0.157115589916002,0,0,2.80705868584208,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0.43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| ||
|short_description=p4@KIFC3 | |||
}} | }} |
Latest revision as of 04:45, 17 September 2015
Short description: | p4@KIFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIFC3_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -75bp_to_ENST00000421376, NM_001130099, uc002emo.3, uc010cdf.2, uc010vhy.1_5end |
EntrezGene: | KIFC3 |
HGNC: | 6326 |
UniProt: | A8K6S2Q9BVG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.16e-11 | 2 |
kidney interstitial cell | 3.16e-11 | 2 |
juxtaglomerular complex cell | 3.16e-11 | 2 |
renal interstitial pericyte | 3.16e-11 | 2 |
extraglomerular mesangial cell | 3.16e-11 | 2 |
kidney cell | 2.84e-10 | 17 |
kidney epithelial cell | 2.84e-10 | 17 |
kidney tubule cell | 2.28e-08 | 10 |
nephron tubule epithelial cell | 2.28e-08 | 10 |
epithelial cell of nephron | 3.08e-08 | 15 |
epithelial cell | 5.25e-07 | 253 |
glomerular cell | 5.59e-07 | 7 |
kidney corpuscule cell | 5.59e-07 | 7 |
hepatocyte | 5.93e-07 | 12 |
kidney cortical cell | 8.40e-07 | 12 |
renal cortical epithelial cell | 8.40e-07 | 12 |