FFCP PHASE1:Hg19::chr16:57406368..57406392,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:57406368..57406392,+ to FFCP PHASE1:Hg19::chr16:57406368..57406392,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6376 | |EntrezGene=6376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10647 | |HGNC=10647 | ||
|TSSclassifier=strong | |||
|UniProt=P78423 | |UniProt=P78423 | ||
|association_with_transcript=0bp_to_ENST00000006053_5end | |||
|cluster_id=chr16:57406368..57406392,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CX3CL1_5end | |||
|id=chr16:57406368..57406392,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.83e-10;17!CL:0002518;3.83e-10;17!CL:1000449;5.37e-09;15!CL:1000507;1.20e-08;10!CL:1000494;1.20e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.39e-10,17;CL:0002518,2.39e-10,17;CL:1000449,3.29e-09,15;CL:1000507,6.44e-09,10;CL:1000494,6.44e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.81e-47!115;UBERON:0001017!4.63e-41!82;UBERON:0005743!6.29e-40!86;UBERON:0000073!2.41e-37!94;UBERON:0001016!2.41e-37!94;UBERON:0001049!1.89e-36!57;UBERON:0005068!1.89e-36!57;UBERON:0006241!1.89e-36!57;UBERON:0007135!1.89e-36!57;UBERON:0000955!9.72e-35!69;UBERON:0006238!9.72e-35!69;UBERON:0002616!2.23e-30!59;UBERON:0003075!2.56e-29!86;UBERON:0007284!2.56e-29!86;UBERON:0003080!1.40e-28!42;UBERON:0002346!2.62e-28!90;UBERON:0002780!6.88e-28!41;UBERON:0001890!6.88e-28!41;UBERON:0006240!6.88e-28!41;UBERON:0001893!1.53e-23!34;UBERON:0002020!2.12e-23!34;UBERON:0003528!2.12e-23!34;UBERON:0001869!7.55e-23!32;UBERON:0002791!1.06e-22!33;UBERON:0004121!2.64e-22!169;UBERON:0000025!3.55e-22!194;UBERON:0000924!5.42e-22!173;UBERON:0006601!5.42e-22!173;UBERON:0000033!7.69e-22!123;UBERON:0000153!8.24e-22!129;UBERON:0007811!8.24e-22!129;UBERON:0003056!1.01e-21!61;UBERON:0004111!1.10e-21!241;UBERON:0000956!1.05e-17!25;UBERON:0000203!1.05e-17!25;UBERON:0002619!1.83e-17!22;UBERON:0000477!6.01e-17!286;UBERON:0001950!6.29e-16!20;UBERON:0000483!4.56e-15!309;UBERON:0000119!1.86e-14!312;UBERON:0000475!2.19e-12!365;UBERON:0000481!3.32e-12!347;UBERON:0000922!5.64e-11!612;UBERON:0000468!6.41e-10!659;UBERON:0002050!2.40e-09!605;UBERON:0005423!2.40e-09!605;UBERON:0000467!2.90e-09!625;UBERON:0000480!3.92e-09!626;UBERON:0000923!5.11e-09!604;UBERON:0005291!5.11e-09!604;UBERON:0006598!5.11e-09!604;UBERON:0002532!5.11e-09!604;UBERON:0003076!5.96e-09!15;UBERON:0003057!5.96e-09!15;UBERON:0000064!1.96e-08!219;UBERON:0000062!2.43e-08!511;UBERON:0000489!2.43e-08!32;UBERON:0003103!1.17e-07!69;UBERON:0004732!1.74e-07!13;UBERON:0002420!1.80e-07!9;UBERON:0007245!1.80e-07!9;UBERON:0010009!1.80e-07!9;UBERON:0010011!1.80e-07!9;UBERON:0000454!1.80e-07!9;UBERON:0004876!1.97e-07!20;UBERON:0005172!2.94e-07!55;UBERON:0005173!2.94e-07!55;UBERON:0004733!3.66e-07!12;UBERON:0002028!3.66e-07!12;UBERON:0007277!3.66e-07!12;UBERON:0002308!3.89e-07!9;UBERON:0000125!3.89e-07!9;UBERON:0005177!5.05e-07!107;UBERON:0002113!7.82e-07!27;UBERON:0003918!7.82e-07!27;UBERON:0005095!7.82e-07!27;UBERON:0007687!7.82e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.29e-26;32!UBERON:0001893;1.04e-25;34!UBERON:0003528;2.86e-25;34!UBERON:0002020;2.86e-25;34!UBERON:0002780;3.75e-25;41!UBERON:0001890;3.75e-25;41!UBERON:0002791;1.07e-24;32!UBERON:0002619;1.08e-24;22!UBERON:0000073;2.51e-24;53!UBERON:0002616;2.51e-24;53!UBERON:0001950;1.71e-22;20!UBERON:0000956;1.91e-22;25!UBERON:0000203;1.91e-22;25!UBERON:0001017;1.91e-18;75!UBERON:0000955;1.51e-17;68!UBERON:0001016;4.66e-15;83!UBERON:0007023;2.58e-14;114!UBERON:0000489;9.10e-11;29!UBERON:0006554;8.79e-10;30!UBERON:0001008;8.79e-10;30!UBERON:0004732;3.10e-09;13!UBERON:0006555;5.37e-09;15!UBERON:0004819;5.37e-09;15!UBERON:0001285;5.37e-09;15!UBERON:0007684;5.37e-09;15!UBERON:0004733;9.33e-09;12!UBERON:0002028;9.33e-09;12!UBERON:0000200;1.06e-08;6!UBERON:0004211;1.20e-08;10!UBERON:0009773;1.20e-08;10!UBERON:0001231;1.20e-08;10!UBERON:0004810;1.20e-08;10!UBERON:0002420;1.57e-08;9!UBERON:0007245;1.57e-08;9!UBERON:0010009;1.57e-08;9!UBERON:0010011;1.57e-08;9!UBERON:0000454;1.57e-08;9!UBERON:0002113;2.07e-08;24!UBERON:0011143;2.07e-08;24!UBERON:0000125;4.35e-08;9!UBERON:0002308;4.35e-08;9!UBERON:0001894;1.54e-07;7!UBERON:0000349;2.52e-07;5!UBERON:0002298;3.35e-07;6!UBERON:0001872;4.27e-07;5!UBERON:0001871;4.77e-07;6!UBERON:0002021;6.28e-07;5 | |||
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| ||
|short_description=p2@CX3CL1 | |||
}} | }} |
Latest revision as of 03:51, 17 September 2015
Short description: | p2@CX3CL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CX3CL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000006053_5end |
EntrezGene: | CX3CL1 |
HGNC: | 10647 |
UniProt: | P78423 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.39e-10 | 17 |
kidney epithelial cell | 2.39e-10 | 17 |
epithelial cell of nephron | 3.29e-09 | 15 |
kidney tubule cell | 6.44e-09 | 10 |
nephron tubule epithelial cell | 6.44e-09 | 10 |