FFCP PHASE1:Hg19::chr15:74422585..74422594,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:74422585..74422594,+ to FFCP PHASE1:Hg19::chr15:74422585..74422594,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57611 | |EntrezGene=57611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29286 | |HGNC=29286 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXK2 | |UniProt=Q6UXK2 | ||
|association_with_transcript=0bp_to_ENST00000435464,NM_001130138,uc010bjg.2_5end | |||
|cluster_id=chr15:74422585..74422594,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_12_at_ISLR2_5end | |||
|id=chr15:74422585..74422594,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.10e-11!8;CL:0002319!8.74e-11!25;CL:0002605!1.58e-10!3;CL:0000133!4.26e-10!59;CL:0000242!7.26e-08!2;CL:0000221!7.82e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.39e-44;2!CL:0000540;1.76e-15;6!CL:0000404;1.76e-15;6!CL:0002319;2.50e-13;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.08e-43,8;CL:0000540,1.76e-15,6;CL:0000031,1.76e-15,6;CL:0000404,1.76e-15,6;CL:0002319,2.50e-13,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.76e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-14!94;UBERON:0001016!1.01e-14!94;UBERON:0005743!7.65e-14!86;UBERON:0001869!1.11e-13!32;UBERON:0001017!2.12e-13!82;UBERON:0000956!4.34e-13!25;UBERON:0000203!4.34e-13!25;UBERON:0001893!9.97e-13!34;UBERON:0002780!7.31e-12!41;UBERON:0001890!7.31e-12!41;UBERON:0006240!7.31e-12!41;UBERON:0003080!1.64e-11!42;UBERON:0002791!3.25e-11!33;UBERON:0002020!8.08e-11!34;UBERON:0003528!8.08e-11!34;UBERON:0003056!8.19e-11!61;UBERON:0000924!4.36e-10!173;UBERON:0006601!4.36e-10!173;UBERON:0004121!1.31e-09!169;UBERON:0000955!4.76e-09!69;UBERON:0006238!4.76e-09!69;UBERON:0001950!7.96e-09!20;UBERON:0002616!1.47e-08!59;UBERON:0000153!4.10e-08!129;UBERON:0007811!4.10e-08!129;UBERON:0001630!5.93e-08!2;UBERON:0005090!5.93e-08!2;UBERON:0002619!6.13e-08!22;UBERON:0001049!9.90e-08!57;UBERON:0005068!9.90e-08!57;UBERON:0006241!9.90e-08!57;UBERON:0007135!9.90e-08!57;UBERON:0002346!4.58e-07!90;UBERON:0000033!5.20e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.23e-11;49!UBERON:0001950;3.51e-10;20!UBERON:0002619;2.38e-09;22!UBERON:0002114;1.00e-08;2!UBERON:0000956;2.43e-08;25!UBERON:0000203;2.43e-08;25!UBERON:0001016;5.27e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.89e-17,81;UBERON:0001016,4.02e-15,89;UBERON:0001950,3.46e-10,20;UBERON:0002619,2.35e-09,22;UBERON:0002114,1.04e-08,2;UBERON:0000956,2.40e-08,25;UBERON:0000203,2.40e-08,25;UBERON:0004121,7.12e-08,171;UBERON:0000924,7.12e-08,171;UBERON:0006601,7.12e-08,171;UBERON:0011216,1.33e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,2.60279707715243,1.54657762555539,1.50764638800914,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,11.9768278800717,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,7.03967351750127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0.327628914576042,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0.205116364240755,6.80593579798639,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,4.37579847214576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,6.10890966476528,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0,0,0,0,0,0.952257725854961,0,0.0620747142958579,0,0,0.202117188958219,0,0.684466602170562,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,2.60279707715243,1.54657762555539,1.50764638800914,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,11.9768278800717,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,7.03967351750127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0.327628914576042,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0.205116364240755,6.80593579798639,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,4.37579847214576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,6.10890966476528,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0,0,0,0,0,0.952257725854961,0,0.0620747142958579,0,0,0.202117188958219,0,0.684466602170562,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p12@ISLR2 | |||
}} | }} |
Latest revision as of 00:20, 19 September 2015
Short description: | p12@ISLR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ISLR2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000435464, NM_001130138, uc010bjg.2_5end |
EntrezGene: | ISLR2 |
HGNC: | 29286 |
UniProt: | Q6UXK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.08e-43 | 8 |
neuron | 1.76e-15 | 6 |
neuroblast | 1.76e-15 | 6 |
electrically signaling cell | 1.76e-15 | 6 |
neural cell | 2.50e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.89e-17 | 81 |
nervous system | 4.02e-15 | 89 |
neocortex | 3.46e-10 | 20 |
regional part of cerebral cortex | 2.35e-09 | 22 |
duodenum | 1.04e-08 | 2 |
cerebral cortex | 2.40e-08 | 25 |
pallium | 2.40e-08 | 25 |
ectoderm-derived structure | 7.12e-08 | 171 |
ectoderm | 7.12e-08 | 171 |
presumptive ectoderm | 7.12e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |