FFCP PHASE1:Hg19::chr14:102605749..102605772,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:102605749..102605772,+ to FFCP PHASE1:Hg19::chr14:102605749..102605772,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91833 | |EntrezGene=91833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19667 | |HGNC=19667 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000557485_5end | |||
|cluster_id=chr14:102605749..102605772,+ | |||
|description=CAGE_peak_2_at_WDR20_5end | |||
|id=chr14:102605749..102605772,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.85e-14!254;CL:0002076!3.06e-13!43;CL:0000223!3.07e-13!59;CL:0002368!5.35e-09!13;CL:0002202!6.15e-07!9;CL:0002632!6.15e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.11e-12;13!CL:0002076;1.15e-11;42!CL:0002202;1.42e-11;9!CL:0002632;1.42e-11;9!CL:0000082;9.42e-10;19!CL:0000307;2.30e-07;3!CL:0002621;2.30e-07;3!CL:0002322;2.62e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.54e-16,58;CL:0002076,1.64e-14,42;CL:0002368,2.31e-12,13;CL:0002202,1.14e-11,9;CL:0002632,1.14e-11,9;CL:0000066,5.93e-11,253;CL:0000082,7.65e-10,19;CL:0002621,1.28e-07,3;CL:0002322,2.24e-07,5;CL:0000068,3.39e-07,3;CL:0000069,3.39e-07,3;CL:0000307,3.39e-07,3;CL:0000377,3.39e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.60e-08;30!CL:0000223;5.96e-08;58!CL:0000377;2.30e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.30e-19!143;DOID:162!2.34e-18!235;DOID:14566!7.83e-18!239;DOID:305!4.43e-17!106;DOID:0050686!1.36e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.97e-09;14!DOID:1324;3.65e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.60e-16,106;DOID:0050687,3.77e-14,143;DOID:162,3.41e-11,235;DOID:14566,1.06e-10,239;DOID:1749,3.09e-09,14;DOID:1324,3.57e-08,15;DOID:0050615,1.42e-07,16;DOID:7,7.86e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004807!1.97e-07!28;UBERON:0005153!4.36e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;3.84e-14;22!UBERON:0004802;9.42e-10;19!UBERON:0000115;9.42e-10;19!UBERON:0005178;1.16e-08;34!UBERON:0002224;1.16e-08;34!UBERON:0005911;3.37e-08;36!UBERON:0001264;3.40e-08;10!UBERON:0002048;3.90e-08;22!UBERON:0000117;3.90e-08;22!UBERON:0000171;3.90e-08;22!UBERON:0000170;3.90e-08;22!UBERON:0005181;4.68e-08;35!UBERON:0001949;2.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.97e-12,101;UBERON:0004807,1.30e-10,28;UBERON:0005153,5.77e-10,37;UBERON:0004802,7.65e-10,19;UBERON:0000115,7.65e-10,19;UBERON:0005178,2.05e-09,34;UBERON:0002224,2.05e-09,34;UBERON:0005181,4.72e-09,35;UBERON:0001264,2.36e-08,10;UBERON:0002048,3.28e-08,22;UBERON:0000117,3.28e-08,22;UBERON:0000171,3.28e-08,22;UBERON:0000170,3.28e-08,22;UBERON:0005597,3.28e-08,22;UBERON:0000118,3.28e-08,22;UBERON:0001004,9.90e-08,74;UBERON:0001949,1.28e-07,3;UBERON:0005157,4.30e-07,47;UBERON:0008947,6.51e-07,38;UBERON:0003258,6.51e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.534893840235659,1.72411237844886,0.472264687882075,0,0,0.309632246632152,2.75826367343678,1.50602959389125,0.369754010166788,2.16908161624845,1.42169232487422,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.785874452986276,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0.169560592310488,1.54608682530637,1.63647672354501,2.00763216772303,1.46368447355514,2.65059536642971,1.16193942869518,0.829288440122964,1.51392510525377,0.72995471815166,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.491953754172454,0,0.548751427043128,0,0.703702806881416,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0.992425680696705,1.34337784054272,1.74380363108377,0.766765358330422,0,0,0.207328115540772,0,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0.206768026122887,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.966875596732978,0.200506470303285,0.184161977871793,0.114814448164607,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,2.29388645740534,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,1.14853107599234,0.650060246036521,0,0.096670718292122,0.308097234229289,0,0.137836572484531,0,0,0.0852266274161009,0,0.826424576804891,1.34533047155574,1.27612712494584,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,1.34060455107157,2.17781969722645,0.0941438007767792,0.86101074534246,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,1.38871292465715,0,0.980160863924127,0.371606350251437,1.58696134274089,0.142283686696828,0.637705090915289,0.199579371432817,0,0.635020748171649,0.649243880549111,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0.540911356951966,0,1.4098700508785,0.37428108081644,0,0.242721043499027,1.22587722705226,2.27308917445131,1.43246690842614,0.296964680832639,0,0,0.140669416410513,0.222617410045812,2.14245036494787,0,0,0,0,0.20453736500431,0.615424027305347,0,4.85289096195565,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,1.04951999995435,0.724999575434793,1.0241410345695,1.5255219017566,1.18193840883968,1.37897349296586,0.583209226766509,0,1.77148277162768,0.964771509003264,1.52581736317083,0.552896299656123,0,0,0,0.41827123283581,0,0.797594390929008,0.23056390438806,0.359030577639089,3.25942115766024,0.31900115973192,0,0,3.06579894587209,0,0.332423363800313,0,0.392125068635479,0.335643173951685,0,0,1.05499032264014,1.79556088975062,0.989471500037586,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.943615861729479,0,0.234264445725339,0,0.391329237864179,1.45668227720456,0,0,0,0,5.56196651833622,1.03688191397247,3.98792323624311,3.64091151463049,1.56966459203613,2.38944859545918,5.97680046662565,0.138674673013139,0.173559738335131,0.685946781900644,5.13649318824375,0,0.171986032471617,1.16107597546902,0.730893170861856,0.656923656425674,0,0.441280633457501,0,0.274083849293502,0.397429223405979,0.379864775735272,0.977756913674015,0.160317640503067,0,0.19980960958213,0.144090417154106,0.343609788497747,0.171594997861965,0.288109595976299,0,0.707082103850386,0,0,0.305994652908965,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0.798716001995964,0,0,0,0,1.16495949527454,0.86661500537946,1.56590130924216,1.3480708770837,0.0984274815147488,0.592713324460491,0,0.544813624446302,1.60753148465019,1.78801267576404,2.07720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| 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| ||
|short_description=p2@WDR20 | |||
}} | }} |
Latest revision as of 13:26, 18 September 2015
Short description: | p2@WDR20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WDR20_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000557485_5end |
EntrezGene: | WDR20 |
HGNC: | 19667 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 7.54e-16 | 58 |
endo-epithelial cell | 1.64e-14 | 42 |
respiratory epithelial cell | 2.31e-12 | 13 |
epithelial cell of tracheobronchial tree | 1.14e-11 | 9 |
epithelial cell of lower respiratory tract | 1.14e-11 | 9 |
epithelial cell | 5.93e-11 | 253 |
epithelial cell of lung | 7.65e-10 | 19 |
gingival epithelial cell | 1.28e-07 | 3 |
embryonic stem cell | 2.24e-07 | 5 |
duct epithelial cell | 3.39e-07 | 3 |
branched duct epithelial cell | 3.39e-07 | 3 |
tracheal epithelial cell | 3.39e-07 | 3 |
tracheoblast | 3.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.97e-12 | 101 |
respiratory system epithelium | 1.30e-10 | 28 |
epithelial bud | 5.77e-10 | 37 |
respiratory tract epithelium | 7.65e-10 | 19 |
lung epithelium | 7.65e-10 | 19 |
thoracic cavity element | 2.05e-09 | 34 |
thoracic cavity | 2.05e-09 | 34 |
thoracic segment organ | 4.72e-09 | 35 |
pancreas | 2.36e-08 | 10 |
lung | 3.28e-08 | 22 |
respiratory tube | 3.28e-08 | 22 |
respiration organ | 3.28e-08 | 22 |
pair of lungs | 3.28e-08 | 22 |
lung primordium | 3.28e-08 | 22 |
lung bud | 3.28e-08 | 22 |
respiratory system | 9.90e-08 | 74 |
gingival epithelium | 1.28e-07 | 3 |
epithelial fold | 4.30e-07 | 47 |
respiratory primordium | 6.51e-07 | 38 |
endoderm of foregut | 6.51e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.60e-16 | 106 |
cell type cancer | 3.77e-14 | 143 |
cancer | 3.41e-11 | 235 |
disease of cellular proliferation | 1.06e-10 | 239 |
squamous cell carcinoma | 3.09e-09 | 14 |
lung cancer | 3.57e-08 | 15 |
respiratory system cancer | 1.42e-07 | 16 |
disease of anatomical entity | 7.86e-07 | 39 |