FFCP PHASE1:Hg19::chr13:99135322..99135327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:99135322..99135327,- | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_at_chr13:99135322..99135327,- | |||
|id=chr13:99135322..99135327,- | |||
|ontology_enrichment_celltype=CL:0002586!6.85e-51!3;CL:0000149!2.16e-38!4;CL:0000147!1.78e-11!14;CL:0002619!8.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.40e-147;3!CL:0000149;1.30e-110;4!CL:0000147;1.63e-32;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.41e-147,3;CL:0000149,1.30e-110,4;CL:0000147,1.63e-32,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.45e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!7.03e-54!5;UBERON:0005388!7.03e-54!5;UBERON:0001802!7.03e-54!5;UBERON:0001781!6.85e-51!3;UBERON:0001782!6.85e-51!3;UBERON:0005424!6.85e-51!3;UBERON:0001896!7.20e-23!3;UBERON:0005290!7.20e-23!3;UBERON:0010096!7.20e-23!3;UBERON:0000019!1.61e-14!19;UBERON:0000047!1.61e-14!19;UBERON:0004088!1.61e-14!19;UBERON:0003072!1.61e-14!19;UBERON:0003071!1.61e-14!19;UBERON:0004128!1.61e-14!19;UBERON:0007625!1.96e-14!11;UBERON:0000970!8.25e-14!20;UBERON:0002104!3.61e-13!21;UBERON:0001456!3.61e-13!21;UBERON:0000020!4.73e-12!23;UBERON:0001032!1.46e-11!24;UBERON:0004456!1.46e-11!24;UBERON:0005085!1.28e-09!29;UBERON:0002298!3.41e-09!8;UBERON:0005743!6.59e-09!86;UBERON:0000073!4.88e-08!94;UBERON:0001016!4.88e-08!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-156;5!UBERON:0005388;1.50e-156;5!UBERON:0001802;1.50e-156;5!UBERON:0001781;5.40e-147;3!UBERON:0001782;5.40e-147;3!UBERON:0000019;3.82e-42;19!UBERON:0000047;3.82e-42;19!UBERON:0004088;3.82e-42;19!UBERON:0010230;3.82e-42;19!UBERON:0007625;4.67e-41;11!UBERON:0000970;4.28e-40;20!UBERON:0002104;3.06e-38;21!UBERON:0001456;3.06e-38;21!UBERON:0000020;5.16e-35;23!UBERON:0001032;1.33e-33;24!UBERON:0004456;1.33e-33;24!UBERON:0000033;9.32e-16;50!UBERON:0010371;3.95e-14;31!UBERON:0001444;5.76e-14;48!UBERON:0007811;1.35e-09;52!UBERON:0000153;1.96e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.41e-147,3;UBERON:0005424,5.41e-147,3;UBERON:0000966,1.07e-130,6;UBERON:0005388,1.07e-130,6;UBERON:0001802,1.07e-130,6;UBERON:0001781,1.30e-110,4;UBERON:0007625,4.67e-41,11;UBERON:0000019,4.28e-40,20;UBERON:0000047,4.28e-40,20;UBERON:0010312,4.28e-40,20;UBERON:0004088,4.28e-40,20;UBERON:0010230,4.28e-40,20;UBERON:0003072,4.28e-40,20;UBERON:0004128,4.28e-40,20;UBERON:0003071,4.28e-40,20;UBERON:0000970,3.06e-38,21;UBERON:0002104,3.06e-38,21;UBERON:0001456,1.49e-36,22;UBERON:0000020,1.33e-33,24;UBERON:0001032,1.33e-33,24;UBERON:0004456,1.33e-33,24;UBERON:0005085,2.93e-26,31;UBERON:0001444,5.55e-17,49;UBERON:0000033,5.62e-15,56;UBERON:0000153,1.29e-13,62;UBERON:0007811,1.29e-13,62;UBERON:0003056,1.29e-13,61;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0010371,2.22e-08,104;UBERON:0004923,1.21e-07,66;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p@chr13:99135322..99135327,- | |||
}} | }} |
Latest revision as of 17:40, 24 July 2015
Short description: | p@chr13:99135322..99135327, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99135322..99135327, - |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.41e-147 | 3 |
visual pigment cell | 1.30e-110 | 4 |
pigment cell | 1.63e-32 | 14 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.41e-147 | 3 |
presumptive retinal pigmented epithelium | 5.41e-147 | 3 |
retina | 1.07e-130 | 6 |
photoreceptor array | 1.07e-130 | 6 |
posterior segment of eyeball | 1.07e-130 | 6 |
layer of retina | 1.30e-110 | 4 |
pigment epithelium of eye | 4.67e-41 | 11 |
camera-type eye | 4.28e-40 | 20 |
simple eye | 4.28e-40 | 20 |
immature eye | 4.28e-40 | 20 |
ocular region | 4.28e-40 | 20 |
eyeball of camera-type eye | 4.28e-40 | 20 |
optic cup | 4.28e-40 | 20 |
optic vesicle | 4.28e-40 | 20 |
eye primordium | 4.28e-40 | 20 |
eye | 3.06e-38 | 21 |
visual system | 3.06e-38 | 21 |
face | 1.49e-36 | 22 |
sense organ | 1.33e-33 | 24 |
sensory system | 1.33e-33 | 24 |
entire sense organ system | 1.33e-33 | 24 |
ectodermal placode | 2.93e-26 | 31 |
subdivision of head | 5.55e-17 | 49 |
head | 5.62e-15 | 56 |
anterior region of body | 1.29e-13 | 62 |
craniocervical region | 1.29e-13 | 62 |
pre-chordal neural plate | 1.29e-13 | 61 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
ecto-epithelium | 2.22e-08 | 104 |
organ component layer | 1.21e-07 | 66 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |