FFCP PHASE1:Hg19::chr13:30424397..30424406,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:30424397..30424406,- to FFCP PHASE1:Hg19::chr13:30424397..30424406,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5412 | |EntrezGene=5412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12504 | |HGNC=12504 | ||
|TSSclassifier=strong | |||
|UniProt=B2R4J1,O95164 | |UniProt=B2R4J1,O95164 | ||
|association_with_transcript=413bp_to_NM_007106,uc001usp.2_5end | |||
|cluster_id=chr13:30424397..30424406,- | |||
|description=CAGE_peak_11_at_UBL3_5end | |||
|id=chr13:30424397..30424406,- | |||
|ontology_enrichment_celltype=CL:0002620!7.86e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.24e-34;19!CL:0002577;2.16e-21;3!CL:0002541;2.39e-21;3!CL:0002537;2.09e-13;5!CL:0000148;5.76e-11;10!CL:0000840;1.34e-10;5!CL:0000147;7.25e-08;14!CL:0000228;8.12e-08;1!CL:0002566;8.12e-08;1!CL:0002372;8.12e-08;1!CL:0000990;3.21e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.46e-34,19;CL:0002541,1.82e-21,3;CL:0002577,2.57e-21,3;CL:0002537,2.09e-13,5;CL:0000148,4.49e-11,10;CL:0000541,4.49e-11,10;CL:0000840,1.53e-10,5;CL:0001029,1.53e-10,5;CL:0002566,5.79e-08,1;CL:0000147,6.10e-08,14;CL:0000228,7.10e-08,1;CL:0002372,7.10e-08,1;CL:0000990,3.50e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.96e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.46e-07;4!DOID:1612;1.46e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.59e-07,4;DOID:1612,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.33e-12!14;UBERON:0000158!1.33e-12!14;UBERON:0003124!2.45e-08!7;UBERON:0002097!2.01e-07!40;UBERON:0000478!2.06e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.27e-33;10!UBERON:0000158;4.27e-33;10!UBERON:0000478;4.59e-27;24!UBERON:0003124;2.39e-21;3!UBERON:0000920;2.39e-21;3!UBERON:0001987;3.43e-16;4!UBERON:0000305;4.06e-16;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.69e-47,14;UBERON:0000158,1.69e-47,14;UBERON:0003124,4.59e-35,7;UBERON:0000478,5.22e-27,24;UBERON:0000920,1.82e-21,3;UBERON:0001987,3.90e-16,4;UBERON:0004340,3.90e-16,4;UBERON:0000305,5.13e-16,7;UBERON:0004871,4.90e-14,8;UBERON:0004923,1.40e-10,66 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.671746422719773,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,1.29818957461873,2.08955684759121,2.12732736830184,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,1.06778694409284,0.635795703478686,0,0.92747276314595,0.772921620136887,1.30281799432113,0.168776332241266,0.0974370051611986,0.252433774244115,1.19664868234989,0.323292113637624,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0,0,0,0,1.8414389344729,0.381988425558278,3.51652341630141,0,1.64523988325318,0.600686115687835,4.0015700568281,0,0,0,0.646358578788889,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.179060963239896,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0,0.260650843404249,0,0,0,0,0.320182673410333,2.12189300012382,6.65741758041988,3.0239029332968,0,0.306923946576125,0,0.256278298511402,0.511707249066704,0,0,0,0,0.164254312027618,0,0.348631135379878,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,7.1623345421307,11.2846578716403,7.37185685038157,0,0.140669416410513,0.333926115068718,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,1.30213880542617,2.0990399999087,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.697118721393016,0.153900517007594,0.569710279235006,0,0,0.325942115766024,3.50901275705111,2.65633020865401,4.26427820814908,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.387025325156341,0.146178634172371,0.328461828212837,0.581934098930517,0,0.225980740780532,0,0.19871461170299,0.569797163602908,0,0.320635281006135,0.426905989478705,0,0,0.343609788497747,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0.364497339948148,0.335434687599266,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.979762080328227,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.869349641179368,0,0,2.12308764558307,0.570930667089935,0,0,0,0.298509605773748,0,0.554805861502613,0.947015026375446,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.414943514785307,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.300841313397029,0,0,0,0.163771917510097,0.147856086217045,0.202612753855184,0,0,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0.171488009437418,0.543757863814654,0.197318320688547,0.236387681767936,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0.891139200981258,1.2679671827502,0.509781344063451,0,0.128915775947154,0,0.178553938605658,0,0.0802413666891683,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0.106727345877715,1.9307228228694,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.671746422719773,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,1.29818957461873,2.08955684759121,2.12732736830184,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,1.06778694409284,0.635795703478686,0,0.92747276314595,0.772921620136887,1.30281799432113,0.168776332241266,0.0974370051611986,0.252433774244115,1.19664868234989,0.323292113637624,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0,0,0,0,1.8414389344729,0.381988425558278,3.51652341630141,0,1.64523988325318,0.600686115687835,4.0015700568281,0,0,0,0.646358578788889,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.179060963239896,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0,0.260650843404249,0,0,0,0,0.320182673410333,2.12189300012382,6.65741758041988,3.0239029332968,0,0.306923946576125,0,0.256278298511402,0.511707249066704,0,0,0,0,0.164254312027618,0,0.348631135379878,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,7.1623345421307,11.2846578716403,7.37185685038157,0,0.140669416410513,0.333926115068718,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,1.30213880542617,2.0990399999087,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.697118721393016,0.153900517007594,0.569710279235006,0,0,0.325942115766024,3.50901275705111,2.65633020865401,4.26427820814908,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.387025325156341,0.146178634172371,0.328461828212837,0.581934098930517,0,0.225980740780532,0,0.19871461170299,0.569797163602908,0,0.320635281006135,0.426905989478705,0,0,0.343609788497747,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0.364497339948148,0.335434687599266,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.979762080328227,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.869349641179368,0,0,2.12308764558307,0.570930667089935,0,0,0,0.298509605773748,0,0.554805861502613,0.947015026375446,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.414943514785307,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.300841313397029,0,0,0,0.163771917510097,0.147856086217045,0.202612753855184,0,0,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0.171488009437418,0.543757863814654,0.197318320688547,0.236387681767936,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0.891139200981258,1.2679671827502,0.509781344063451,0,0.128915775947154,0,0.178553938605658,0,0.0802413666891683,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0.106727345877715,1.9307228228694,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p11@UBL3 | |||
}} | }} |
Latest revision as of 01:34, 17 September 2015
Short description: | p11@UBL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UBL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 413bp_to_NM_007106, uc001usp.2_5end |
EntrezGene: | UBL3 |
HGNC: | 12504 |
UniProt: | B2R4J1O95164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.46e-34 | 19 |
chorionic membrane mesenchymal stem cell | 1.82e-21 | 3 |
placental epithelial cell | 2.57e-21 | 3 |
amnion mesenchymal stem cell | 2.09e-13 | 5 |
melanocyte | 4.49e-11 | 10 |
melanoblast | 4.49e-11 | 10 |
immature conventional dendritic cell | 1.53e-10 | 5 |
common dendritic progenitor | 1.53e-10 | 5 |
dark melanocyte | 5.79e-08 | 1 |
pigment cell | 6.10e-08 | 14 |
multinucleate cell | 7.10e-08 | 1 |
myotube | 7.10e-08 | 1 |
conventional dendritic cell | 3.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.69e-47 | 14 |
membranous layer | 1.69e-47 | 14 |
chorion | 4.59e-35 | 7 |
extraembryonic structure | 5.22e-27 | 24 |
egg chorion | 1.82e-21 | 3 |
placenta | 3.90e-16 | 4 |
allantois | 3.90e-16 | 4 |
amnion | 5.13e-16 | 7 |
somatic layer of lateral plate mesoderm | 4.90e-14 | 8 |
organ component layer | 1.40e-10 | 66 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.59e-07 | 4 |
breast cancer | 1.59e-07 | 4 |