FFCP PHASE1:Hg19::chr13:22245083..22245103,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:22245083..22245103,- to FFCP PHASE1:Hg19::chr13:22245083..22245103,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:22245083..22245103,- | |||
|description=CAGE_peak_at_chr13:22245083..22245103,- | |||
|id=chr13:22245083..22245103,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.10e-12;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-12;1!DOID:4549;2.62e-12;1!DOID:5861;2.62e-12;1!DOID:6496;2.62e-12;1!DOID:3151;9.10e-12;1!DOID:3149;9.10e-12;1!DOID:1325;4.20e-07;7!DOID:3904;4.20e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.63e-12,1;DOID:4549,2.63e-12,1;DOID:5861,2.63e-12,1;DOID:6496,2.63e-12,1;DOID:3151,1.81e-11,1;DOID:3149,1.81e-11,1;DOID:1325,3.96e-07,7;DOID:3904,3.96e-07,7;DOID:3910,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.72e-17!57;UBERON:0005068!2.72e-17!57;UBERON:0006241!2.72e-17!57;UBERON:0007135!2.72e-17!57;UBERON:0001950!7.13e-15!20;UBERON:0000956!1.20e-13!25;UBERON:0000203!1.20e-13!25;UBERON:0002020!1.61e-13!34;UBERON:0003528!1.61e-13!34;UBERON:0003075!1.99e-13!86;UBERON:0007284!1.99e-13!86;UBERON:0001869!2.73e-13!32;UBERON:0007023!4.27e-13!115;UBERON:0002619!4.50e-13!22;UBERON:0002616!1.12e-12!59;UBERON:0002346!2.84e-12!90;UBERON:0002780!3.50e-12!41;UBERON:0001890!3.50e-12!41;UBERON:0006240!3.50e-12!41;UBERON:0001893!4.05e-12!34;UBERON:0003080!1.03e-11!42;UBERON:0001017!1.42e-11!82;UBERON:0005743!2.34e-11!86;UBERON:0002791!3.39e-11!33;UBERON:0000073!1.27e-10!94;UBERON:0001016!1.27e-10!94;UBERON:0000955!5.19e-10!69;UBERON:0006238!5.19e-10!69;UBERON:0003056!6.53e-10!61;UBERON:0000200!2.95e-08!6;UBERON:0000153!3.42e-08!129;UBERON:0007811!3.42e-08!129;UBERON:0003076!4.86e-07!15;UBERON:0003057!4.86e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;3.98e-15;3!UBERON:0001872;2.79e-09;5!UBERON:0002298;5.17e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,3.46e-15,3;UBERON:0001872,2.17e-09,5;UBERON:0002298,4.82e-08,6;UBERON:0003076,6.91e-07,15;UBERON:0003057,6.91e-07,15;UBERON:0004903,9.96e-07,2;UBERON:0002173,9.96e-07,2;UBERON:0002186,9.96e-07,2 | |||
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| 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| ||
|short_description=p@chr13:22245083..22245103,- | |||
}} | }} |
Latest revision as of 15:04, 24 July 2015
Short description: | p@chr13:22245083..22245103, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:22245083..22245103, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 3.46e-15 | 3 |
parietal lobe | 2.17e-09 | 5 |
brainstem | 4.82e-08 | 6 |
posterior neural tube | 6.91e-07 | 15 |
chordal neural plate | 6.91e-07 | 15 |
bronchoalveolar duct junction | 9.96e-07 | 2 |
alveolar duct | 9.96e-07 | 2 |
bronchiole | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.63e-12 | 1 |
extraosseous chondrosarcoma | 2.63e-12 | 1 |
myxoid chondrosarcoma | 2.63e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 2.63e-12 | 1 |
skin squamous cell carcinoma | 1.81e-11 | 1 |
keratoacanthoma | 1.81e-11 | 1 |
bronchus cancer | 3.96e-07 | 7 |
bronchogenic carcinoma | 3.96e-07 | 7 |
lung adenocarcinoma | 9.96e-07 | 2 |