FFCP PHASE1:Hg19::chr12:65277574..65277589,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=400046 | |EntrezGene=400046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000540024,NR_033988,uc001ssj.1_5end | |||
|cluster_id=chr12:65277574..65277589,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_2_at_FLJ41278_5end | |||
|id=chr12:65277574..65277589,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-98,2;CL:0002563,3.10e-50,4;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31 | |||
|ontology_enrichment_disease=DOID:2355!2.47e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0002619!5.04e-59!22;UBERON:0000956!7.21e-52!25;UBERON:0000203!7.21e-52!25;UBERON:0001869!8.33e-52!32;UBERON:0002780!3.56e-50!41;UBERON:0001890!3.56e-50!41;UBERON:0006240!3.56e-50!41;UBERON:0003080!6.42e-49!42;UBERON:0001893!1.20e-48!34;UBERON:0001950!3.70e-48!20;UBERON:0002791!2.83e-44!33;UBERON:0001049!1.15e-43!57;UBERON:0005068!1.15e-43!57;UBERON:0006241!1.15e-43!57;UBERON:0007135!1.15e-43!57;UBERON:0002020!6.44e-43!34;UBERON:0003528!6.44e-43!34;UBERON:0002616!4.55e-42!59;UBERON:0000955!1.25e-38!69;UBERON:0006238!1.25e-38!69;UBERON:0001017!3.68e-35!82;UBERON:0005743!2.35e-33!86;UBERON:0003056!9.60e-33!61;UBERON:0003075!1.30e-30!86;UBERON:0007284!1.30e-30!86;UBERON:0000073!7.74e-30!94;UBERON:0001016!7.74e-30!94;UBERON:0002346!4.50e-29!90;UBERON:0007023!6.16e-27!115;UBERON:0000200!3.43e-26!6;UBERON:0000033!3.44e-22!123;UBERON:0000153!5.80e-21!129;UBERON:0007811!5.80e-21!129;UBERON:0000349!1.74e-20!5;UBERON:0002771!5.62e-20!3;UBERON:0001871!9.81e-20!7;UBERON:0004121!8.09e-15!169;UBERON:0001954!2.22e-14!2;UBERON:0003022!2.22e-14!2;UBERON:0002421!2.22e-14!2;UBERON:0002600!2.22e-14!2;UBERON:0000924!2.24e-14!173;UBERON:0006601!2.24e-14!173;UBERON:0002021!4.17e-12!5;UBERON:0001872!7.59e-12!5;UBERON:0000025!3.48e-11!194;UBERON:0000064!1.70e-09!219;UBERON:0004111!3.74e-08!241;UBERON:0003112!7.26e-08!1;UBERON:0000032!7.26e-08!1;UBERON:0005253!7.26e-08!1;UBERON:0003128!7.26e-08!1;UBERON:0002241!7.26e-08!1;UBERON:0001703!7.26e-08!1;UBERON:0004761!7.26e-08!1;UBERON:0009617!7.26e-08!1;UBERON:0002022!7.76e-08!1;UBERON:0002902!8.84e-08!1;UBERON:0009899!8.84e-08!1;UBERON:0007190!1.07e-07!1;UBERON:0001052!1.58e-07!4;UBERON:0002581!2.98e-07!1;UBERON:0001882!3.17e-07!1;UBERON:0005403!3.17e-07!1;UBERON:0000477!5.08e-07!286;UBERON:0000483!5.77e-07!309;UBERON:0000119!7.47e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0001242,3.10e-50,4;UBERON:0001262,3.10e-50,4;UBERON:0004786,3.10e-50,4;UBERON:0004808,3.10e-50,4;UBERON:0001277,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0003350,5.22e-26,8;UBERON:0001155,2.62e-23,9;UBERON:0000485,2.62e-23,9;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p2@FLJ41278 | |||
}} | }} |
Latest revision as of 21:50, 19 September 2015
Short description: | p2@FLJ41278 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FLJ41278_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 20bp_to_ENST00000540024, NR_033988, uc001ssj.1_5end |
EntrezGene: | FLJ41278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.55e-98 | 2 |
intestinal epithelial cell | 3.10e-50 | 4 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.10e-50 | 4 |
intestinal mucosa | 3.10e-50 | 4 |
wall of intestine | 3.10e-50 | 4 |
gastrointestinal system mucosa | 3.10e-50 | 4 |
gastrointestinal system epithelium | 3.10e-50 | 4 |
intestinal epithelium | 3.10e-50 | 4 |
lower digestive tract | 1.48e-40 | 5 |
epithelium of mucosa | 5.22e-26 | 8 |
colon | 2.62e-23 | 9 |
simple columnar epithelium | 2.62e-23 | 9 |
large intestine | 2.25e-19 | 11 |
intestine | 1.85e-12 | 17 |
hindgut | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |