FFCP PHASE1:Hg19::chr12:53201553..53201562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3851 | |EntrezGene=3851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6441 | |HGNC=6441 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PIN2 | |UniProt=Q6PIN2 | ||
|association_with_transcript=0bp_to_BC032132_5end | |||
|cluster_id=chr12:53201553..53201562,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_11_at_KRT4_5end | |||
|id=chr12:53201553..53201562,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.38e-25!3;UBERON:0001033!3.38e-25!3;UBERON:0010056!3.38e-25!3;UBERON:0002372!1.56e-19!1;UBERON:0001961!1.56e-19!1;UBERON:0001744!1.56e-19!1;UBERON:0001735!1.56e-19!1;UBERON:0000997!3.25e-19!1;UBERON:0005056!3.25e-19!1;UBERON:0001042!4.98e-17!10;UBERON:0009145!4.98e-17!10;UBERON:0006562!1.52e-15!11;UBERON:0000166!3.75e-14!21;UBERON:0000344!4.52e-14!12;UBERON:0000002!6.50e-13!6;UBERON:0001560!6.50e-13!6;UBERON:0000165!1.06e-10!28;UBERON:0000930!1.06e-10!28;UBERON:0000341!1.57e-10!2;UBERON:0000078!9.53e-10!18;UBERON:0001557!2.89e-09!19;UBERON:0000161!1.27e-08!35;UBERON:0000974!3.37e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.89e-53;3!UBERON:0001033;4.89e-53;3!UBERON:0002372;2.21e-40;1!UBERON:0001961;2.21e-40;1!UBERON:0001744;2.21e-40;1!UBERON:0001042;2.21e-40;1!UBERON:0001735;2.21e-40;1!UBERON:0000341;3.81e-21;2!UBERON:0006562;5.69e-21;2!UBERON:0001043;1.22e-14;3!UBERON:0000165;1.74e-13;28!UBERON:0000974;5.92e-08;6!UBERON:0000020;6.98e-08;23!UBERON:0001032;1.36e-07;24!UBERON:0004456;1.36e-07;24!UBERON:0000153;2.00e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.89e-53,3;UBERON:0001033,4.89e-53,3;UBERON:0010056,4.89e-53,3;UBERON:0002372,2.21e-40,1;UBERON:0001961,2.21e-40,1;UBERON:0001744,2.21e-40,1;UBERON:0001735,2.21e-40,1;UBERON:0001042,4.93e-36,10;UBERON:0009145,4.93e-36,10;UBERON:0006562,7.42e-33,11;UBERON:0000341,3.81e-21,2;UBERON:0001557,1.91e-19,19;UBERON:0000166,6.38e-17,22;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0000165,4.73e-13,29;UBERON:0000930,4.73e-13,29;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0000161,1.12e-10,36;UBERON:0008814,8.47e-10,18;UBERON:0000072,2.33e-08,47;UBERON:0001444,4.76e-08,49;UBERON:0001041,6.09e-08,87;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0000065,2.27e-07,54;UBERON:0000033,3.92e-07,56 | |||
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|short_description=p11@KRT4 | |||
}} | }} |
Latest revision as of 00:37, 19 September 2015
Short description: | p11@KRT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KRT4_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_BC032132_5end |
EntrezGene: | KRT4 |
HGNC: | 6441 |
UniProt: | Q6PIN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 4.89e-53 | 3 |
gustatory system | 4.89e-53 | 3 |
future tongue | 4.89e-53 | 3 |
tonsil | 2.21e-40 | 1 |
mucosa-associated lymphoid tissue | 2.21e-40 | 1 |
lymphoid tissue | 2.21e-40 | 1 |
tonsillar ring | 2.21e-40 | 1 |
chordate pharynx | 4.93e-36 | 10 |
pharyngeal region of foregut | 4.93e-36 | 10 |
pharynx | 7.42e-33 | 11 |
throat | 3.81e-21 | 2 |
upper respiratory tract | 1.91e-19 | 19 |
oral opening | 6.38e-17 | 22 |
esophagus | 1.22e-14 | 3 |
esophageal region | 1.22e-14 | 3 |
mouth | 4.73e-13 | 29 |
stomodeum | 4.73e-13 | 29 |
anterior region of body | 7.02e-11 | 62 |
craniocervical region | 7.02e-11 | 62 |
orifice | 1.12e-10 | 36 |
pharyngeal arch system | 8.47e-10 | 18 |
segment of respiratory tract | 2.33e-08 | 47 |
subdivision of head | 4.76e-08 | 49 |
foregut | 6.09e-08 | 87 |
sense organ | 1.36e-07 | 24 |
sensory system | 1.36e-07 | 24 |
entire sense organ system | 1.36e-07 | 24 |
respiratory tract | 2.27e-07 | 54 |
head | 3.92e-07 | 56 |