FFCP PHASE1:Hg19::chr12:53200490..53200511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-342bp_to_CU692075_5end | |||
|cluster_id=chr12:53200490..53200511,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_3_at_CU692075_5end | |||
|id=chr12:53200490..53200511,+ | |||
|ontology_enrichment_celltype=CL:1000415!9.54e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.10e-41;1!UBERON:0008814;6.30e-21;2!UBERON:0010056;6.30e-21;2 | |||
|ontology_enrichment_disease=DOID:3151!1.25e-12!1;DOID:3149!1.25e-12!1;DOID:178!2.75e-12!1;DOID:326!2.75e-12!1;DOID:3978!2.75e-12!1;DOID:3394!2.75e-12!1;DOID:5844!2.75e-12!1;DOID:1749!1.34e-07!14;DOID:3451!6.07e-07!2;DOID:4159!6.07e-07!2;DOID:0060122!6.07e-07!2;DOID:3910!6.42e-07!2;DOID:114!9.02e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.35e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.22e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001723!3.98e-16!3;UBERON:0001033!3.98e-16!3;UBERON:0010056!3.98e-16!3;UBERON:0002372!7.89e-13!1;UBERON:0001961!7.89e-13!1;UBERON:0001744!7.89e-13!1;UBERON:0001735!7.89e-13!1;UBERON:0001042!7.57e-11!10;UBERON:0009145!7.57e-11!10;UBERON:0006562!6.56e-10!11;UBERON:0000166!8.23e-09!21;UBERON:0000002!1.94e-08!6;UBERON:0001560!1.94e-08!6;UBERON:0000161!7.11e-08!35;UBERON:0004903!6.42e-07!2;UBERON:0002173!6.42e-07!2;UBERON:0002186!6.42e-07!2;UBERON:0003127!8.06e-07!2;UBERON:0000341!8.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.28e-53;3!UBERON:0001033;4.28e-53;3!UBERON:0002372;8.10e-41;1!UBERON:0001961;8.10e-41;1!UBERON:0001744;8.10e-41;1!UBERON:0001042;8.10e-41;1!UBERON:0001735;8.10e-41;1!UBERON:0006562;3.44e-21;2!UBERON:0001043;1.31e-14;3!UBERON:0000165;1.53e-13;28!UBERON:0000020;6.86e-08;23!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6!UBERON:0001032;1.34e-07;24!UBERON:0004456;1.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.89e-53,3;UBERON:0001033,4.89e-53,3;UBERON:0010056,4.89e-53,3;UBERON:0002372,9.91e-41,1;UBERON:0001961,9.91e-41,1;UBERON:0001744,9.91e-41,1;UBERON:0001735,9.91e-41,1;UBERON:0001042,3.88e-36,10;UBERON:0009145,3.88e-36,10;UBERON:0006562,5.96e-33,11;UBERON:0001557,1.68e-19,19;UBERON:0000166,5.72e-17,22;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0000165,4.36e-13,29;UBERON:0000930,4.36e-13,29;UBERON:0000161,1.05e-10,36;UBERON:0008814,8.47e-10,18;UBERON:0000072,2.21e-08,47;UBERON:0001444,4.54e-08,49;UBERON:0001041,5.87e-08,87;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0000065,2.17e-07,54;UBERON:0000033,3.76e-07,56 | |||
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|short_description=p3@CU692075 | |||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p3@CU692075 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU692075_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -342bp_to_CU692075_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 4.89e-53 | 3 |
gustatory system | 4.89e-53 | 3 |
future tongue | 4.89e-53 | 3 |
tonsil | 9.91e-41 | 1 |
mucosa-associated lymphoid tissue | 9.91e-41 | 1 |
lymphoid tissue | 9.91e-41 | 1 |
tonsillar ring | 9.91e-41 | 1 |
chordate pharynx | 3.88e-36 | 10 |
pharyngeal region of foregut | 3.88e-36 | 10 |
pharynx | 5.96e-33 | 11 |
upper respiratory tract | 1.68e-19 | 19 |
oral opening | 5.72e-17 | 22 |
esophagus | 1.22e-14 | 3 |
esophageal region | 1.22e-14 | 3 |
mouth | 4.36e-13 | 29 |
stomodeum | 4.36e-13 | 29 |
orifice | 1.05e-10 | 36 |
pharyngeal arch system | 8.47e-10 | 18 |
segment of respiratory tract | 2.21e-08 | 47 |
subdivision of head | 4.54e-08 | 49 |
foregut | 5.87e-08 | 87 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
sense organ | 1.36e-07 | 24 |
sensory system | 1.36e-07 | 24 |
entire sense organ system | 1.36e-07 | 24 |
respiratory tract | 2.17e-07 | 54 |
head | 3.76e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.22e-09 | 5 |