FFCP PHASE1:Hg19::chr12:51403047..51403061,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:51403047..51403061,- to FFCP PHASE1:Hg19::chr12:51403047..51403061,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4891 | |EntrezGene=4891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10908 | |HGNC=10908 | ||
|TSSclassifier=strong | |||
|UniProt=B4DK84,F5H741 | |UniProt=B4DK84,F5H741 | ||
|association_with_transcript=0bp_to_NM_001174130_5end | |||
|cluster_id=chr12:51403047..51403061,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_5_at_SLC11A2_5end | |||
|id=chr12:51403047..51403061,- | |||
|ontology_enrichment_celltype=CL:0000557!1.10e-34!71;CL:0000839!1.53e-32!70;CL:0000766!1.59e-31!76;CL:0002009!4.56e-31!65;CL:0002194!9.42e-30!63;CL:0000576!9.42e-30!63;CL:0000040!9.42e-30!63;CL:0000559!9.42e-30!63;CL:0000763!5.30e-28!112;CL:0000049!5.30e-28!112;CL:0002057!9.08e-21!42;CL:0000860!1.88e-18!45;CL:0000738!3.30e-18!140;CL:0000037!2.44e-16!172;CL:0000566!2.44e-16!172;CL:0002031!2.11e-15!124;CL:0002032!4.14e-15!165;CL:0000837!4.14e-15!165;CL:0000988!1.81e-14!182;CL:0002087!2.89e-12!119;CL:0000451!4.92e-10!10;CL:0000990!1.05e-08!8;CL:0000840!8.79e-07!5;CL:0001029!8.79e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.83e-26;39!CL:0000234;1.83e-26;39!CL:0000860;1.44e-21;33!CL:0002057;1.44e-21;33!CL:0000766;5.07e-15;69!CL:0000576;6.32e-14;48!CL:0000235;3.16e-13;6!CL:0000451;2.33e-12;10!CL:0000097;4.17e-10;5!CL:0000990;6.98e-10;8!CL:0000840;1.57e-08;5!CL:0002619;1.93e-07;3!CL:0000763;3.02e-07;100!CL:0000738;8.17e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.52e-41,67;CL:0000839,2.88e-40,66;CL:0000766,7.53e-36,72;CL:0002009,6.76e-35,61;CL:0002194,2.02e-34,59;CL:0000576,2.02e-34,59;CL:0000040,2.02e-34,59;CL:0000559,2.02e-34,59;CL:0000763,6.50e-26,108;CL:0000049,6.50e-26,108;CL:0000473,1.99e-25,48;CL:0000234,1.99e-25,48;CL:0000738,1.00e-18,136;CL:0002031,1.50e-18,120;CL:0000860,7.65e-17,42;CL:0002057,7.65e-17,42;CL:0000037,3.47e-14,168;CL:0002032,8.84e-14,161;CL:0000837,8.84e-14,161;CL:0002087,2.77e-13,115;CL:0000235,3.16e-13,6;CL:0000988,8.53e-13,177;CL:0000451,1.30e-12,10;CL:0000097,2.98e-10,5;CL:0002028,2.98e-10,5;CL:0000990,4.17e-10,8;CL:0000840,1.06e-08,5;CL:0001029,1.06e-08,5;CL:0002619,2.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-13;42!UBERON:0006601;2.71e-10;82!CL:0000049;1.71e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-36!115;UBERON:0001049!3.89e-31!57;UBERON:0005068!3.89e-31!57;UBERON:0006241!3.89e-31!57;UBERON:0007135!3.89e-31!57;UBERON:0002371!2.46e-29!80;UBERON:0001474!1.17e-25!86;UBERON:0002616!7.72e-25!59;UBERON:0003080!9.75e-25!42;UBERON:0002390!1.49e-24!102;UBERON:0003061!1.49e-24!102;UBERON:0002780!3.41e-24!41;UBERON:0001890!3.41e-24!41;UBERON:0006240!3.41e-24!41;UBERON:0005743!7.01e-24!86;UBERON:0001017!5.40e-23!82;UBERON:0000955!2.37e-22!69;UBERON:0006238!2.37e-22!69;UBERON:0000073!2.26e-21!94;UBERON:0001016!2.26e-21!94;UBERON:0003075!4.07e-21!86;UBERON:0007284!4.07e-21!86;UBERON:0002193!6.69e-21!112;UBERON:0002405!4.06e-20!115;UBERON:0004765!1.32e-19!101;UBERON:0001434!1.32e-19!101;UBERON:0002346!2.93e-19!90;UBERON:0001893!4.57e-19!34;UBERON:0002020!4.78e-19!34;UBERON:0003528!4.78e-19!34;UBERON:0002791!2.82e-18!33;UBERON:0001869!2.98e-17!32;UBERON:0003056!4.69e-16!61;UBERON:0002619!8.91e-14!22;UBERON:0001950!2.05e-12!20;UBERON:0000956!3.00e-12!25;UBERON:0000203!3.00e-12!25;UBERON:0000153!2.25e-10!129;UBERON:0007811!2.25e-10!129;UBERON:0000033!1.30e-09!123;UBERON:0000062!5.27e-09!511;UBERON:0002308!1.11e-08!9;UBERON:0000125!1.11e-08!9;UBERON:0002298!2.83e-08!8;UBERON:0002204!3.89e-08!167;UBERON:0003076!1.35e-07!15;UBERON:0003057!1.35e-07!15;UBERON:0003081!2.76e-07!216;UBERON:0004121!3.29e-07!169;UBERON:0009663!6.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.87e-22;34!UBERON:0003528;1.56e-20;34!UBERON:0002020;1.56e-20;34!UBERON:0002780;3.35e-20;41!UBERON:0001890;3.35e-20;41!UBERON:0000073;5.95e-20;53!UBERON:0002616;5.95e-20;53!UBERON:0002791;8.42e-20;32!UBERON:0001869;1.27e-19;32!UBERON:0002619;2.05e-17;22!UBERON:0001950;5.04e-17;20!UBERON:0000956;6.98e-15;25!UBERON:0000203;6.98e-15;25!UBERON:0000125;1.76e-12;9!UBERON:0002308;1.76e-12;9!UBERON:0002298;2.19e-11;6!UBERON:0001017;2.34e-11;75!UBERON:0000955;1.08e-10;68!UBERON:0000200;1.09e-09;6!UBERON:0009663;2.40e-09;7!UBERON:0002420;2.75e-09;9!UBERON:0007245;2.75e-09;9!UBERON:0010009;2.75e-09;9!UBERON:0010011;2.75e-09;9!UBERON:0000454;2.75e-09;9!UBERON:0001016;2.76e-09;83!UBERON:0004732;2.45e-08;13!UBERON:0007023;1.56e-07;114!UBERON:0000369;2.38e-07;4!UBERON:0002435;2.38e-07;4!UBERON:0000204;2.38e-07;4!UBERON:0004733;4.29e-07;12!UBERON:0002028;4.29e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.73e-36,56;UBERON:0005068,1.73e-36,56;UBERON:0006241,1.73e-36,56;UBERON:0007135,1.73e-36,56;UBERON:0002371,4.39e-35,76;UBERON:0000073,3.18e-34,53;UBERON:0002616,3.18e-34,53;UBERON:0001474,1.44e-31,82;UBERON:0002780,2.51e-28,41;UBERON:0001890,2.51e-28,41;UBERON:0003080,2.51e-28,41;UBERON:0006240,2.51e-28,41;UBERON:0004765,1.29e-27,90;UBERON:0000955,4.37e-27,68;UBERON:0006238,4.37e-27,68;UBERON:0002405,2.59e-26,93;UBERON:0001017,1.17e-25,81;UBERON:0001893,4.57e-25,34;UBERON:0001434,4.88e-25,100;UBERON:0003528,4.91e-25,34;UBERON:0002020,4.91e-25,34;UBERON:0003075,2.33e-24,82;UBERON:0007284,2.33e-24,82;UBERON:0002390,2.55e-24,98;UBERON:0003061,2.55e-24,98;UBERON:0001016,2.15e-23,89;UBERON:0002346,1.08e-22,86;UBERON:0002791,3.95e-22,32;UBERON:0001869,6.27e-22,32;UBERON:0002193,6.64e-21,108;UBERON:0007023,6.04e-20,114;UBERON:0003056,2.38e-19,61;UBERON:0010371,4.11e-19,104;UBERON:0002619,1.71e-17,22;UBERON:0001950,4.70e-17,20;UBERON:0000956,5.96e-15,25;UBERON:0000203,5.96e-15,25;UBERON:0010314,1.02e-12,132;UBERON:0000125,1.73e-12,9;UBERON:0002308,1.73e-12,9;UBERON:0002298,1.44e-11,6;UBERON:0002204,9.49e-11,167;UBERON:0000200,6.91e-10,6;UBERON:0009663,2.86e-09,7;UBERON:0003076,3.12e-09,15;UBERON:0003057,3.12e-09,15;UBERON:0002420,3.50e-09,9;UBERON:0007245,3.50e-09,9;UBERON:0010009,3.50e-09,9;UBERON:0010011,3.50e-09,9;UBERON:0000454,3.50e-09,9;UBERON:0004121,6.07e-09,171;UBERON:0000924,6.07e-09,171;UBERON:0006601,6.07e-09,171;UBERON:0004732,1.86e-08,13;UBERON:0000923,3.71e-08,560;UBERON:0010316,3.71e-08,560;UBERON:0005291,3.71e-08,560;UBERON:0006598,3.71e-08,560;UBERON:0010317,3.71e-08,560;UBERON:0002532,3.71e-08,560;UBERON:0002050,6.16e-08,564;UBERON:0003081,6.57e-08,203;UBERON:0000369,2.73e-07,4;UBERON:0002435,2.73e-07,4;UBERON:0000204,2.73e-07,4;UBERON:0010082,2.73e-07,4;UBERON:0004733,3.67e-07,12;UBERON:0002028,3.67e-07,12;UBERON:0007277,3.67e-07,12;UBERON:0005423,4.83e-07,581;UBERON:0000988,9.42e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,8.06095707263728,6.15397965436061,7.46969146139141,0.872389432677388,1.88937971844405,0.485168122375632,1.62700325833979,1.23350366406548,3.09706370895104,0.863077176966451,2.30544635876191,0.945928919554341,2.06847408441971,3.87290810150296,1.35426486594342,2.07066573496865,3.0019676506363,2.69668181334102,1.53041946185451,2.24650318953266,1.27867425159808,0.329851300186716,0.797854630486527,0.426224750532694,4.35313857942876,6.80862269629368,6.22822248995575,1.00499466102697,2.08593167368081,2.38907729175628,3.63239701580021,5.89244217580104,4.74693581161327,0,0.425208599930087,0.209658645508376,0.112328631146495,0.600707571366025,0.32145117339416,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,23.0428649494825,16.0199358315326,13.0298801308488,2.8618874916641,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,7.38651018262192,8.65815781015179,5.35072184239422,0,0,0,0,0,0,2.95597942737566,5.45900290882001,3.7319060797339,3.45887888200707,3.40854570251226,3.17489471460845,1.52795370223311,1.17217447210047,0,2.26220483947312,2.10240140490742,8.28896654628677,0,0,0,2.97324946242889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,3.48613383440118,0,7.29742683847143,7.5338563714819,8.43335757932127,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0.508189248444927,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.355709216742071,0,0,0.766021480529467,0.423347165447766,0.324621940274555,0,1.82587743226554,0.156679895773023,0,0,0.802940375518498,0.403599414382095,0,0,0.307240764308458,0.894704431569664,1.83534055883099,1.36771666781428,0,0,0.540911356951966,0.33307196799782,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,1.40669416410513,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,2.59750674853184,0,0,0,0.724999575434793,0,0,0,0,0,0,3.54296554325536,1.4471572635049,3.05163472634166,0.221158519862449,0.591095237907095,1.53569778007781,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,4.92028270758942,0,2.10838001152805,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,2.02594547058812,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0.407712618220842,1.255234155748,0,0,0.600420288709789,5.06549901900374,0,0,0,0.558564802544508,0,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,2.72406812223151,0,0,0,1.799791132412,0.77380195455795,2.12623448303086,0,0.788057072991982,0.157363764404994,0,0,0,2.1440859791201,0,0,3.80099721227599,1.72844298240254,0,0,0,0,0,0.146552233678082,0,2.71494208359256,3.70251284879532,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,1.77213635993397,1.58634144372552,2.3786276834235,1.72022758707021,4.32623300993724,3.84997698236577,0,0,1.51649117541648,3.14011866899464,0,0,0,0,0,0,0.757612021100357,0,0,0,0,0.15543720058278,0,0.796483835818512,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,1.39210127963548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0,0,1.38258436151731,0.584580926518165,1.72724292407372,2.45348091383766,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.31225210347254,1.41696576325585,1.75597244962866,1.43581454968528,0.756215088665154,2.21303207885497,3.39098855826887,2.85538840518309,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,2.43135304626221,2.34323429584154,3.10030194751776,2.91712726891971,0.546974809018219,0,0.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| ||
|short_description=p5@SLC11A2 | |||
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Latest revision as of 19:23, 18 September 2015
Short description: | p5@SLC11A2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC11A2_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_NM_001174130_5end |
EntrezGene: | SLC11A2 |
HGNC: | 10908 |
UniProt: | B4DK84F5H741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data