FFCP PHASE1:Hg19::chr12:117176138..117176147,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:117176138..117176147,+ to FFCP PHASE1:Hg19::chr12:117176138..117176147,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84900 | |EntrezGene=84900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25905 | |HGNC=25905 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZS7 | |UniProt=F8VZS7 | ||
|association_with_transcript=0bp_to_ENST00000547718_5end | |||
|cluster_id=chr12:117176138..117176147,+ | |||
|coexpression_cluster_id=C3243 | |||
|description=CAGE_peak_3_at_RNFT2_5end | |||
|id=chr12:117176138..117176147,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.60e-10!25;CL:0000133!1.39e-08!59;CL:0000047!6.83e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.23e-12;6!CL:0000404;6.23e-12;6!CL:0002319;2.17e-11;25!CL:0002321;2.97e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.87e-16,8;CL:0000540,1.03e-11,6;CL:0000031,1.03e-11,6;CL:0000404,1.03e-11,6;CL:0002319,2.54e-11,25;CL:0000133,6.05e-11,59;CL:0000221,5.22e-08,72;CL:0002322,5.83e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;6.23e-12;6!UBERON:0006601;6.59e-12;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.07e-14!143;DOID:162!8.46e-12!235;DOID:14566!1.19e-11!239;DOID:305!1.88e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.39e-38!94;UBERON:0001016!8.39e-38!94;UBERON:0005743!1.86e-35!86;UBERON:0001017!4.39e-34!82;UBERON:0000955!3.46e-27!69;UBERON:0006238!3.46e-27!69;UBERON:0001049!1.57e-26!57;UBERON:0005068!1.57e-26!57;UBERON:0006241!1.57e-26!57;UBERON:0007135!1.57e-26!57;UBERON:0002346!4.63e-24!90;UBERON:0003075!8.02e-23!86;UBERON:0007284!8.02e-23!86;UBERON:0002616!1.69e-22!59;UBERON:0002780!3.49e-22!41;UBERON:0001890!3.49e-22!41;UBERON:0006240!3.49e-22!41;UBERON:0003080!3.63e-21!42;UBERON:0003056!1.59e-20!61;UBERON:0000924!5.53e-20!173;UBERON:0006601!5.53e-20!173;UBERON:0004121!7.45e-19!169;UBERON:0001893!1.36e-18!34;UBERON:0002020!3.12e-18!34;UBERON:0003528!3.12e-18!34;UBERON:0000033!3.40e-18!123;UBERON:0002791!7.35e-18!33;UBERON:0000153!8.39e-18!129;UBERON:0007811!8.39e-18!129;UBERON:0001869!1.05e-17!32;UBERON:0000956!1.89e-13!25;UBERON:0000203!1.89e-13!25;UBERON:0002619!2.41e-12!22;UBERON:0001950!1.42e-11!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.94e-29;32!UBERON:0001869;5.07e-29;32!UBERON:0001893;8.38e-28;34!UBERON:0003528;4.05e-27;34!UBERON:0002020;4.05e-27;34!UBERON:0002780;4.86e-26;41!UBERON:0001890;4.86e-26;41!UBERON:0001950;7.14e-23;20!UBERON:0000073;1.72e-22;53!UBERON:0002616;1.72e-22;53!UBERON:0000956;2.61e-22;25!UBERON:0000203;2.61e-22;25!UBERON:0000955;5.94e-22;68!UBERON:0002619;1.81e-20;22!UBERON:0001016;1.17e-18;83!UBERON:0001017;1.12e-17;75!UBERON:0002420;1.63e-10;9!UBERON:0000125;1.63e-10;9!UBERON:0007245;1.63e-10;9!UBERON:0002308;1.63e-10;9!UBERON:0010009;1.63e-10;9!UBERON:0010011;1.63e-10;9!UBERON:0000454;1.63e-10;9!UBERON:0009663;1.96e-10;7!UBERON:0000200;3.25e-09;6!UBERON:0000369;3.26e-09;4!UBERON:0002435;3.26e-09;4!UBERON:0000204;3.26e-09;4!UBERON:0002021;1.75e-07;5!UBERON:0001870;2.27e-07;3!UBERON:0001894;2.61e-07;7!UBERON:0005383;3.01e-07;3!UBERON:0005382;3.01e-07;3!UBERON:0001872;5.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.16e-54,89;UBERON:0001017,8.54e-50,81;UBERON:0000073,5.93e-41,53;UBERON:0002616,5.93e-41,53;UBERON:0001049,1.67e-40,56;UBERON:0005068,1.67e-40,56;UBERON:0006241,1.67e-40,56;UBERON:0007135,1.67e-40,56;UBERON:0000955,3.66e-39,68;UBERON:0006238,3.66e-39,68;UBERON:0002780,2.02e-37,41;UBERON:0001890,2.02e-37,41;UBERON:0003080,2.02e-37,41;UBERON:0006240,2.02e-37,41;UBERON:0001893,1.17e-31,34;UBERON:0001869,1.55e-31,32;UBERON:0003528,3.14e-31,34;UBERON:0002020,3.14e-31,34;UBERON:0002791,5.30e-31,32;UBERON:0003075,6.02e-31,82;UBERON:0007284,6.02e-31,82;UBERON:0002346,1.75e-30,86;UBERON:0003056,9.19e-30,61;UBERON:0004121,1.34e-26,171;UBERON:0000924,1.34e-26,171;UBERON:0006601,1.34e-26,171;UBERON:0010371,3.04e-23,104;UBERON:0001950,4.35e-23,20;UBERON:0000956,2.10e-22,25;UBERON:0000203,2.10e-22,25;UBERON:0011216,2.79e-21,223;UBERON:0002619,1.16e-20,22;UBERON:0010314,7.76e-16,132;UBERON:0007023,5.18e-11,114;UBERON:0002420,1.25e-10,9;UBERON:0007245,1.25e-10,9;UBERON:0010009,1.25e-10,9;UBERON:0010011,1.25e-10,9;UBERON:0000454,1.25e-10,9;UBERON:0009663,2.64e-10,7;UBERON:0000125,2.93e-10,9;UBERON:0002308,2.93e-10,9;UBERON:0000025,6.28e-10,192;UBERON:0000369,1.53e-09,4;UBERON:0002435,1.53e-09,4;UBERON:0000204,1.53e-09,4;UBERON:0010082,1.53e-09,4;UBERON:0000200,3.03e-09,6;UBERON:0005383,1.60e-07,3;UBERON:0005382,1.60e-07,3;UBERON:0002021,1.91e-07,5;UBERON:0001870,2.50e-07,3;UBERON:0001872,3.85e-07,5;UBERON:0001894,4.19e-07,7;UBERON:0006222,4.19e-07,7;UBERON:0004732,7.38e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.984968464614303,0.204000691244253,0.626909442956176,0.286235987131057,1.64249310087461,1.00434111675842,0.687720651731561,1.39571002064908,0.550975469195755,0,0,0,0,0,0,1.23947520928483,1.70603078984906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,1.20118796110804,1.72425731986345,0,0,0,0,0,0,0,0,0.590129310341499,0,0,0.334372990781356,0,1.4203434172042,0,0,0.589211814949674,0.664601683750863,0.270803863765016,0.512365278902701,0.260118695119756,0.657751618414705,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.472674085820339,0.221729397462564,0.790513071238134,0.589405839739707,0.364295288292542,0.370784442784429,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0.225222960966644,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.500474079487857,0.554128230968366,0.438977620880838,0.919463387397059,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0,2.07355300420312,0.530119073285941,1.62671520017326,1.55491582523056,1.7662459561294,1.45990943630332,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0,0,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,1.7658523976586,0.368965315629341,0,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,0,0,1.85488647960123,0.117408694235822,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,1.14596527667483,1.17217447210047,0,0,0.600686115687835,0.285826432630578,0.448524337381443,0.43596006883328,0.1466765716419,0.387815147273333,0,0,0,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0.672510863961164,0.197030760201927,0,0.128343036279748,3.30323011489202,3.90419561572865,3.09315525111078,2.51274398001523,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0.620304078368662,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0.241718899183244,0,0.184161977871793,0.459257792658427,0.364182336013434,0.262248829918848,1.80479845162965,0.616122696835318,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0.509752546090077,0,1.11937377361089,0,0,0.769350375349168,0.328014645699706,1.30151357865721,0,0,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0,0.286249773483982,0,0,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0.845086807596724,0.430234056612155,0,1.07001315444375,0,0,0,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.747768497892312,0.962479855263359,0.980160863924127,0.743212700502875,0.577076851905779,0.284567373393656,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0.606802608747567,0.780103689942349,0.852408440419239,0,0.296964680832639,0,1.9882952955326,0.562677665642051,0.222617410045812,0.494411622680279,1.05562704063997,0.19924798825107,0.276283915531148,0.503865495708552,0.511343412510774,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0,0,0,0.969332746095218,1.48428957058962,1.99613798001194,0.260427761085233,0.349839999984783,0,0.1137934482855,0.254253650292766,0.236387681767936,2.06846023944879,0.291604613383254,0.520874984799877,3.54296554325536,1.80894657938112,0,1.3269511191747,2.36438095162838,0.87754158861589,0.653630781113941,0.139423744278603,0,0.113942055847001,0.46112780877612,0.538545866458633,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.424059214301822,1.29833183845255,0,0,0,0.889563386041866,0.617819694732514,0.730953646538188,0.741412462787447,0,2.10838001152805,3.64909578431332,0.586993856796269,0.728341138602278,0,0,1.22429104652196,0.189559738885464,0.60129367765797,1.24425829676697,0,0,0,0,0.284609546029793,1.10939738410511,0.520679215005393,0.0979923974143777,0.0870592065804026,0,0.343972064943233,0.483781656445426,0.730893170861856,0.328461828212837,0,0.882561266915003,0.451961481561065,0.274083849293502,0.596143835108969,3.9885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| ||
|short_description=p3@RNFT2 | |||
}} | }} |
Latest revision as of 16:01, 16 September 2015
Short description: | p3@RNFT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNFT2_5end |
Coexpression cluster: | C3243_occipital_temporal_pons_paracentral_insula_parietal_postcentral |
Association with transcript: | 0bp_to_ENST00000547718_5end |
EntrezGene: | RNFT2 |
HGNC: | 25905 |
UniProt: | F8VZS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.87e-16 | 8 |
neuron | 1.03e-11 | 6 |
neuroblast | 1.03e-11 | 6 |
electrically signaling cell | 1.03e-11 | 6 |
neural cell | 2.54e-11 | 25 |
neurectodermal cell | 6.05e-11 | 59 |
ectodermal cell | 5.22e-08 | 72 |
embryonic stem cell | 5.83e-07 | 5 |