FFCP PHASE1:Hg19::chr12:113229725..113229736,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:113229725..113229736,+ to FFCP PHASE1:Hg19::chr12:113229725..113229736,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22895 | |EntrezGene=22895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17056 | |HGNC=17056 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1A3 | |UniProt=F8W1A3 | ||
|association_with_transcript=0bp_to_ENST00000551198_5end | |||
|cluster_id=chr12:113229725..113229736,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_RPH3A_5end | |||
|id=chr12:113229725..113229736,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.05e-18;82!UBERON:0006215;1.47e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-105!57;UBERON:0005068!1.26e-105!57;UBERON:0006241!1.26e-105!57;UBERON:0007135!1.26e-105!57;UBERON:0001017!1.01e-91!82;UBERON:0005743!1.23e-90!86;UBERON:0002616!3.42e-88!59;UBERON:0000073!5.58e-88!94;UBERON:0001016!5.58e-88!94;UBERON:0000955!5.03e-85!69;UBERON:0006238!5.03e-85!69;UBERON:0002780!1.96e-78!41;UBERON:0001890!1.96e-78!41;UBERON:0006240!1.96e-78!41;UBERON:0003080!2.12e-76!42;UBERON:0003075!2.28e-73!86;UBERON:0007284!2.28e-73!86;UBERON:0002346!8.73e-73!90;UBERON:0001893!2.00e-68!34;UBERON:0002020!3.22e-68!34;UBERON:0003528!3.22e-68!34;UBERON:0001869!8.14e-68!32;UBERON:0002791!3.53e-65!33;UBERON:0007023!7.89e-61!115;UBERON:0002619!1.00e-60!22;UBERON:0001950!7.36e-55!20;UBERON:0003056!1.78e-53!61;UBERON:0000956!4.87e-53!25;UBERON:0000203!4.87e-53!25;UBERON:0000033!4.63e-48!123;UBERON:0000153!2.46e-45!129;UBERON:0007811!2.46e-45!129;UBERON:0000924!7.22e-45!173;UBERON:0006601!7.22e-45!173;UBERON:0004121!2.74e-44!169;UBERON:0003076!1.25e-28!15;UBERON:0003057!1.25e-28!15;UBERON:0000025!1.32e-23!194;UBERON:0004733!8.30e-21!12;UBERON:0002028!8.30e-21!12;UBERON:0007277!8.30e-21!12;UBERON:0000200!8.54e-21!6;UBERON:0001871!9.15e-20!7;UBERON:0004732!4.53e-19!13;UBERON:0004111!5.94e-19!241;UBERON:0002021!2.23e-17!5;UBERON:0000349!1.84e-16!5;UBERON:0002308!2.69e-16!9;UBERON:0000125!2.69e-16!9;UBERON:0002420!2.76e-16!9;UBERON:0007245!2.76e-16!9;UBERON:0010009!2.76e-16!9;UBERON:0010011!2.76e-16!9;UBERON:0000454!2.76e-16!9;UBERON:0000477!3.36e-15!286;UBERON:0002298!6.58e-14!8;UBERON:0000483!3.02e-13!309;UBERON:0002680!4.31e-13!9;UBERON:0001895!4.31e-13!9;UBERON:0010092!4.31e-13!9;UBERON:0000119!5.18e-13!312;UBERON:0000475!1.62e-12!365;UBERON:0000064!2.18e-12!219;UBERON:0001872!1.08e-11!5;UBERON:0001894!3.09e-11!7;UBERON:0006222!3.09e-11!7;UBERON:0002771!5.31e-11!3;UBERON:0009663!6.68e-11!7;UBERON:0000988!2.05e-10!3;UBERON:0001896!4.57e-10!3;UBERON:0005290!4.57e-10!3;UBERON:0010096!4.57e-10!3;UBERON:0002240!7.58e-10!3;UBERON:0000062!2.25e-08!511;UBERON:0001870!3.67e-08!2;UBERON:0000481!8.37e-08!347;UBERON:0000922!1.13e-07!612;UBERON:0000369!1.16e-07!4;UBERON:0002435!1.16e-07!4;UBERON:0000204!1.16e-07!4;UBERON:0010082!1.16e-07!4;UBERON:0002148!1.41e-07!2;UBERON:0009662!1.41e-07!2;UBERON:0001876!1.46e-07!2;UBERON:0001897!1.61e-07!2;UBERON:0001954!1.90e-07!2;UBERON:0003022!1.90e-07!2;UBERON:0002421!1.90e-07!2;UBERON:0002600!1.90e-07!2;UBERON:0000923!2.58e-07!604;UBERON:0005291!2.58e-07!604;UBERON:0006598!2.58e-07!604;UBERON:0002532!2.58e-07!604;UBERON:0002050!2.79e-07!605;UBERON:0005423!2.79e-07!605;UBERON:0001875!5.64e-07!2;UBERON:0006514!5.64e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.56e-74;22!UBERON:0001950;5.18e-73;20!UBERON:0000956;2.74e-65;25!UBERON:0000203;2.74e-65;25!UBERON:0001869;2.76e-56;32!UBERON:0003528;3.91e-55;34!UBERON:0002020;3.91e-55;34!UBERON:0001893;1.33e-52;34!UBERON:0002791;7.18e-50;32!UBERON:0002780;6.24e-44;41!UBERON:0001890;6.24e-44;41!UBERON:0000073;1.97e-42;53!UBERON:0002616;1.97e-42;53!UBERON:0000200;4.29e-33;6!UBERON:0000955;8.23e-33;68!UBERON:0001017;1.10e-30;75!UBERON:0001016;3.68e-25;83!UBERON:0001871;2.30e-19;6!UBERON:0002021;1.17e-18;5!UBERON:0001872;2.23e-18;5!UBERON:0001870;2.43e-17;3!UBERON:0000349;3.04e-17;5!UBERON:0004733;8.25e-16;12!UBERON:0002028;8.25e-16;12!UBERON:0002680;4.64e-15;9!UBERON:0001895;4.64e-15;9!UBERON:0004732;1.49e-14;13!UBERON:0007023;2.11e-14;114!UBERON:0002771;4.55e-12;2!UBERON:0002702;5.37e-12;2!UBERON:0001876;1.83e-11;2!UBERON:0002148;1.83e-11;2!UBERON:0006331;1.83e-11;2!UBERON:0009662;1.83e-11;2!UBERON:0001897;2.82e-11;2!UBERON:0010225;2.82e-11;2!UBERON:0011216;2.02e-10;132!UBERON:0002037;5.07e-09;6!UBERON:0002298;1.95e-08;6!UBERON:0000988;6.28e-08;3!UBERON:0002902;2.95e-07;1!UBERON:0009899;2.95e-07;1!UBERON:0001894;3.22e-07;7!UBERON:0007190;3.41e-07;1!UBERON:0002581;4.69e-07;1!UBERON:0001882;7.39e-07;1!UBERON:0002022;7.39e-07;1!UBERON:0005403;7.39e-07;1!UBERON:0010314;7.78e-07;132!UBERON:0003112;8.75e-07;1!UBERON:0011158;8.75e-07;1!UBERON:0003128;8.75e-07;1!UBERON:0001703;8.75e-07;1!UBERON:0002241;8.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.54e-80,56;UBERON:0005068,1.54e-80,56;UBERON:0006241,1.54e-80,56;UBERON:0007135,1.54e-80,56;UBERON:0000073,1.09e-79,53;UBERON:0002616,1.09e-79,53;UBERON:0002619,2.86e-74,22;UBERON:0000955,3.29e-74,68;UBERON:0006238,3.29e-74,68;UBERON:0001950,5.80e-73,20;UBERON:0001017,5.09e-70,81;UBERON:0001016,1.65e-66,89;UBERON:0000956,3.02e-65,25;UBERON:0000203,3.02e-65,25;UBERON:0003528,6.96e-65,34;UBERON:0002020,6.96e-65,34;UBERON:0002780,1.81e-64,41;UBERON:0001890,1.81e-64,41;UBERON:0003080,1.81e-64,41;UBERON:0006240,1.81e-64,41;UBERON:0001869,4.72e-63,32;UBERON:0001893,3.38e-59,34;UBERON:0002791,1.55e-56,32;UBERON:0003075,1.85e-53,82;UBERON:0007284,1.85e-53,82;UBERON:0002346,9.98e-51,86;UBERON:0007023,2.74e-43,114;UBERON:0003056,4.59e-42,61;UBERON:0010371,5.25e-41,104;UBERON:0010314,1.58e-33,132;UBERON:0000200,4.17e-33,6;UBERON:0004121,3.47e-32,171;UBERON:0000924,3.47e-32,171;UBERON:0006601,3.47e-32,171;UBERON:0011216,7.39e-25,223;UBERON:0000025,1.52e-19,192;UBERON:0001871,2.84e-19,6;UBERON:0002021,1.14e-18,5;UBERON:0001872,2.13e-18,5;UBERON:0001870,2.36e-17,3;UBERON:0000349,3.46e-17,5;UBERON:0003076,1.05e-16,15;UBERON:0003057,1.05e-16,15;UBERON:0004733,9.05e-16,12;UBERON:0002028,9.05e-16,12;UBERON:0007277,9.05e-16,12;UBERON:0002680,5.00e-15,9;UBERON:0001895,5.00e-15,9;UBERON:0010092,5.00e-15,9;UBERON:0004732,1.63e-14,13;UBERON:0004111,1.98e-14,240;UBERON:0002771,4.95e-12,2;UBERON:0002702,5.23e-12,2;UBERON:0002148,2.04e-11,2;UBERON:0006331,2.04e-11,2;UBERON:0009662,2.04e-11,2;UBERON:0001876,2.16e-11,2;UBERON:0001897,2.53e-11,2;UBERON:0010225,2.53e-11,2;UBERON:0000483,5.27e-10,306;UBERON:0000119,7.56e-10,309;UBERON:0002037,5.14e-09,6;UBERON:0006215,5.14e-09,6;UBERON:0002298,2.11e-08,6;UBERON:0000988,6.74e-08,3;UBERON:0002902,2.95e-07,1;UBERON:0009899,2.95e-07,1;UBERON:0001894,3.01e-07,7;UBERON:0006222,3.01e-07,7;UBERON:0007190,3.32e-07,1;UBERON:0002581,4.43e-07,1;UBERON:0002022,6.99e-07,1;UBERON:0001882,7.39e-07,1;UBERON:0005403,7.39e-07,1;UBERON:0003112,8.27e-07,1;UBERON:0011158,8.27e-07,1;UBERON:0003128,8.27e-07,1;UBERON:0001703,8.27e-07,1;UBERON:0002241,8.27e-07,1;UBERON:0004761,8.27e-07,1;UBERON:0009617,8.27e-07,1 | |||
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|short_description=p4@RPH3A | |||
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Latest revision as of 11:18, 16 September 2015
Short description: | p4@RPH3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPH3A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000551198_5end |
EntrezGene: | RPH3A |
HGNC: | 17056 |
UniProt: | F8W1A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data