FFCP PHASE1:Hg19::chr12:105720750..105720778,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:105720750..105720778,- to FFCP PHASE1:Hg19::chr12:105720750..105720778,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000549251_5end | |||
|cluster_id=chr12:105720750..105720778,- | |||
|description=CAGE_peak_1_at_ENST00000549251_5end | |||
|id=chr12:105720750..105720778,- | |||
|ontology_enrichment_celltype=CL:0002620!7.66e-16!23;CL:0000057!1.23e-12!75;CL:0000144!1.12e-07!625;CL:0002371!1.66e-07!591;CL:0000055!1.80e-07!180;CL:0000003!1.91e-07!722;CL:0000012!3.31e-07!682;CL:0000548!3.81e-07!679;CL:0000004!3.81e-07!679;CL:0000255!3.81e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.07e-29;23!CL:1000507;9.63e-11;10!CL:1000494;9.63e-11;10!CL:1000497;1.22e-10;17!CL:0002518;1.22e-10;17!CL:0002551;4.13e-10;6!CL:0000057;1.11e-08;73!CL:1000449;4.90e-08;15!CL:0002556;1.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.95e-30,23;CL:0000057,6.80e-15,76;CL:1000507,9.44e-11,10;CL:1000494,9.44e-11,10;CL:1000497,1.27e-10,17;CL:0002518,1.27e-10,17;CL:0002551,5.49e-10,6;CL:1000449,4.94e-08,15;CL:0002556,1.44e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.71e-09;5!DOID:450;2.71e-09;5!DOID:66;2.71e-09;5!DOID:423;2.71e-09;5!DOID:0080000;2.71e-09;5!DOID:11722;2.71e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.18e-09,5;DOID:450,2.18e-09,5;DOID:66,2.18e-09,5;DOID:423,2.18e-09,5;DOID:0080000,2.18e-09,5;DOID:11722,2.18e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.96e-11!40;UBERON:0002199!4.08e-11!45;UBERON:0002416!4.08e-11!45;UBERON:0003102!5.59e-11!95;UBERON:0002067!8.55e-08!9;UBERON:0004016!8.55e-08!9;UBERON:0010083!8.55e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.70e-18;41!UBERON:0002199;1.36e-14;46!UBERON:0002416;1.36e-14;46!UBERON:0002067;1.75e-13;9!UBERON:0003102;2.47e-12;50!UBERON:0004211;9.63e-11;10!UBERON:0009773;9.63e-11;10!UBERON:0001231;9.63e-11;10!UBERON:0004810;9.63e-11;10!UBERON:0006555;4.90e-08;15!UBERON:0004819;4.90e-08;15!UBERON:0001285;4.90e-08;15!UBERON:0007684;4.90e-08;15!UBERON:0002113;6.84e-08;24!UBERON:0011143;6.84e-08;24!UBERON:0001758;1.74e-07;6!UBERON:0003672;1.74e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.57e-23,41;UBERON:0002199,1.45e-21,46;UBERON:0002416,1.45e-21,46;UBERON:0003102,1.82e-13,99;UBERON:0002067,2.52e-13,9;UBERON:0004016,2.52e-13,9;UBERON:0010083,2.52e-13,9;UBERON:0004810,9.44e-11,10;UBERON:0004211,4.94e-08,15;UBERON:0009773,4.94e-08,15;UBERON:0001231,4.94e-08,15;UBERON:0001285,4.94e-08,15;UBERON:0007684,4.94e-08,15;UBERON:0004208,4.94e-08,15;UBERON:0001758,1.44e-07,6;UBERON:0003672,1.44e-07,6;UBERON:0006555,2.13e-07,16;UBERON:0004819,2.13e-07,16;UBERON:0002113,4.35e-07,26;UBERON:0003918,4.35e-07,26;UBERON:0011143,4.35e-07,26;UBERON:0005095,4.35e-07,26;UBERON:0007687,4.35e-07,26 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,2.53299878168311,0,0,0,0,0,0,0,0,2.01697543935533,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0.136874425072884,0,8.09982100928283,5.66494067204626,8.42205360056368,1.18009283054671,2.68680578668049,0.154816123316076,0,0,0,0,0,0,1.10799081706375,1.00272223735071,1.95309783644267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0.786021525498329,0,0,0,0,0,4.01077644786625,0,0,0,0.25618263945135,0.780356085359269,0.328875809207352,1.38175008892924,0,0,0,0,1.35971211237079,0,0,0.759059076058509,0,0.651083453856419,1.90090408889675,1.05402583354441,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,2.01606743224732,2.13952156626806,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,1.19257444420023,0,0.694281003215189,0,0.419499436209906,0.825354125820202,0.417989933073621,0,1.06729878806013,1.67360306382335,0.402829317109147,1.52054421143703,0,0.367663080345869,0.81014194788176,0,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0.25326102332916,1.05927344650575,0,0,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0,0,0,0.937285727335186,1.24864030732128,2.2818872861778,2.09228152772521,6.22402842811954,15.2160567706044,11.7978677629889,1.63323337003915,2.33385202892359,0,1.18800285728205,0.247266929278557,0,0,5.89176398839232,6.88151859295803,6.92660288710457,3.95079858792754,3.37136575378922,0.45071417671979,0.226864366320042,21.1679770112857,4.91181994282705,2.96704661623387,16.2049191885577,4.53431128649131,10.8209026819164,5.58350568994769,11.3080142601648,1.55899208257918,15.9033277773792,6.62759270224555,0,12.7803453305981,9.16844093871526,5.25637836162512,0.966304265816484,1.09098448236334,0.286804595389004,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.708875486211932,0.179117045405697,0,0.383382679165211,1.47798971368783,0,0,0,0,0,0.763976851116555,0,0,0,0.600686115687835,0,0.336393253036082,0,0.36669142910475,0.258543431515556,0,0,2.92531928243358,3.12022310734098,0,0,0,0,0,0,0.65147236858747,0,0,0.904318131178758,1.74306691720059,0.299918973546171,0,0,0,3.35474797688216,0,2.85273810081437,2.75084482668401,1.02738161275192,1.96967059563885,4.03506518376698,3.34952292343276,6.46882724578552,5.51875056002918,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,2.49800584316026,0.157702415033935,0.234282829985426,0,0,0,0,0,0.695068915744663,0.195801157462741,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0.40101294060657,0.0920809889358963,0.34444334449382,0.182091168006717,0.131124414959424,4.96319574198153,12.1684232624975,3.92174884588428,4.38417673959782,8.12747542475143,0,0,1.29549549661284,0,0.812839312631559,0.501689773854853,6.626783099171,5.81753206250107,5.1491193586101,0,0,0.256450125116389,0.328014645699706,0,0,0,0,1.14853107599234,0,0,0,0.154048617114644,0,1.37836572484531,0.214840489736547,0,0.681813019328807,0,0,0.576570202095319,1.91419068741876,0,0,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0.404364963146632,0,0.421258456238981,0,1.21856744815642,0,1.09199929126389,0,0,0,0,0,0,0,0.405820753925408,0,0,0.717056761020258,0.0982490410131212,0,4.96665489698837,0.211107635297664,0,0.75894634753143,0.699869440489966,0,0,0,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0.159426272728822,1.39705560002972,0.5745161103971,0.846694330895531,0,0.842391534340376,0,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0,8.13536705225592,1.42068073403207,0,0,0,0,0,0.779160935160341,0.329607748453519,0,0.19924798825107,0,0,0.102268682502155,3.69254416383208,5.28767299025073,0.629078458031288,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0,0,0,3.93869651628008,0,0,0,0,0,0,0,0,0.158936578980379,45.1535858089978,2.28525931422807,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.730953646538188,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,1.91858694505451,0,0,0,0.320635281006135,0,0,0,0,0.171594997861965,0,0.248505071130865,0,2.03856309110421,1.15063130943567,0.203996435272644,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78741985211799,7.87461988211796,0,0,0,0,0,0,0,0,0,1.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| ||
|short_description=p1@ENST00000549251 | |||
}} | }} |
Latest revision as of 04:23, 24 July 2015
Short description: | p1@ENST00000549251 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000549251_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000549251_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.95e-30 | 23 |
fibroblast | 6.80e-15 | 76 |
kidney tubule cell | 9.44e-11 | 10 |
nephron tubule epithelial cell | 9.44e-11 | 10 |
kidney cell | 1.27e-10 | 17 |
kidney epithelial cell | 1.27e-10 | 17 |
fibroblast of dermis | 5.49e-10 | 6 |
epithelial cell of nephron | 4.94e-08 | 15 |
fibroblast of periodontium | 1.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.57e-23 | 41 |
integument | 1.45e-21 | 46 |
integumental system | 1.45e-21 | 46 |
surface structure | 1.82e-13 | 99 |
dermis | 2.52e-13 | 9 |
dermatome | 2.52e-13 | 9 |
future dermis | 2.52e-13 | 9 |
nephron tubule epithelium | 9.44e-11 | 10 |
nephron epithelium | 4.94e-08 | 15 |
renal tubule | 4.94e-08 | 15 |
nephron tubule | 4.94e-08 | 15 |
nephron | 4.94e-08 | 15 |
uriniferous tubule | 4.94e-08 | 15 |
nephrogenic mesenchyme | 4.94e-08 | 15 |
periodontium | 1.44e-07 | 6 |
dentition | 1.44e-07 | 6 |
excretory tube | 2.13e-07 | 16 |
kidney epithelium | 2.13e-07 | 16 |
kidney | 4.35e-07 | 26 |
kidney mesenchyme | 4.35e-07 | 26 |
upper urinary tract | 4.35e-07 | 26 |
kidney rudiment | 4.35e-07 | 26 |
kidney field | 4.35e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.18e-09 | 5 |
myotonic disease | 2.18e-09 | 5 |
muscle tissue disease | 2.18e-09 | 5 |
myopathy | 2.18e-09 | 5 |
muscular disease | 2.18e-09 | 5 |
myotonic dystrophy | 2.18e-09 | 5 |