FFCP PHASE1:Hg19::chr11:89925073..89925074,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:89925073..89925074,+ to FFCP PHASE1:Hg19::chr11:89925073..89925074,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:89925073..89925074,+ | |||
|description=CAGE_peak_at_chr11:89925073..89925074,+ | |||
|id=chr11:89925073..89925074,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;4.67e-66;4!CL:0002253;5.96e-34;2!CL:0002231;2.62e-23;3!CL:0002076;8.62e-16;42!CL:0002251;2.76e-14;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.67e-66,4;CL:0002253,7.05e-34,2;CL:0002231,2.62e-23,3;CL:0002076,3.52e-15,42;CL:0002251,2.76e-14,20;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.49e-07;58 | |||
|ontology_enrichment_disease=DOID:3095!6.18e-07!22;DOID:2994!6.18e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.18e-27!34;UBERON:0003528!5.18e-27!34;UBERON:0001049!1.90e-25!57;UBERON:0005068!1.90e-25!57;UBERON:0006241!1.90e-25!57;UBERON:0007135!1.90e-25!57;UBERON:0002616!2.94e-24!59;UBERON:0002346!5.66e-24!90;UBERON:0002780!1.41e-23!41;UBERON:0001890!1.41e-23!41;UBERON:0006240!1.41e-23!41;UBERON:0003080!7.25e-23!42;UBERON:0002791!1.19e-22!33;UBERON:0001893!7.84e-22!34;UBERON:0005743!1.07e-21!86;UBERON:0001017!1.19e-21!82;UBERON:0000073!1.70e-21!94;UBERON:0001016!1.70e-21!94;UBERON:0001869!5.48e-21!32;UBERON:0007023!6.07e-21!115;UBERON:0000955!1.06e-20!69;UBERON:0006238!1.06e-20!69;UBERON:0003075!1.08e-20!86;UBERON:0007284!1.08e-20!86;UBERON:0003056!2.97e-18!61;UBERON:0002619!1.06e-17!22;UBERON:0000956!1.61e-17!25;UBERON:0000203!1.61e-17!25;UBERON:0001950!3.46e-17!20;UBERON:0000924!1.55e-13!173;UBERON:0006601!1.55e-13!173;UBERON:0000033!1.39e-11!123;UBERON:0004121!1.81e-11!169;UBERON:0002308!2.37e-11!9;UBERON:0000125!2.37e-11!9;UBERON:0001872!9.52e-11!5;UBERON:0000153!1.21e-10!129;UBERON:0007811!1.21e-10!129;UBERON:0000200!3.70e-09!6;UBERON:0002298!4.41e-09!8;UBERON:0002420!2.25e-08!9;UBERON:0007245!2.25e-08!9;UBERON:0010009!2.25e-08!9;UBERON:0010011!2.25e-08!9;UBERON:0000454!2.25e-08!9;UBERON:0006331!6.83e-08!3;UBERON:0006947!1.00e-07!3;UBERON:0004054!1.00e-07!3;UBERON:0009663!1.34e-07!7;UBERON:0000483!1.70e-07!309;UBERON:0002771!2.38e-07!3;UBERON:0000119!2.65e-07!312;UBERON:0000988!2.77e-07!3;UBERON:0000025!3.82e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.67e-66;4!UBERON:0001262;4.67e-66;4!UBERON:0004786;4.67e-66;4!UBERON:0004808;4.67e-66;4!UBERON:0001277;4.67e-66;4!UBERON:0000485;2.18e-38;7!UBERON:0003929;2.18e-38;7!UBERON:0003350;9.08e-34;8!UBERON:0001052;9.45e-18;4!UBERON:0000160;9.75e-16;17!UBERON:0004907;1.71e-14;5!UBERON:0000344;2.76e-14;20!UBERON:0005409;1.41e-12;22!UBERON:0004921;2.91e-09;33!UBERON:0001155;1.16e-08;9!UBERON:0005911;1.30e-08;36!UBERON:0000490;1.30e-08;33!UBERON:0002367;2.32e-07;11!UBERON:0010147;2.32e-07;11!UBERON:0000059;2.55e-07;11!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.67e-66,4;UBERON:0001262,4.67e-66,4;UBERON:0004786,4.67e-66,4;UBERON:0004808,4.67e-66,4;UBERON:0001277,4.67e-66,4;UBERON:0003350,9.08e-34,8;UBERON:0000485,3.59e-30,9;UBERON:0001052,1.03e-17,4;UBERON:0000160,9.75e-16,17;UBERON:0001046,5.27e-15,19;UBERON:0004907,1.83e-14,5;UBERON:0000344,2.76e-14,20;UBERON:0003929,4.68e-12,54;UBERON:0005409,2.91e-11,25;UBERON:0001155,1.21e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0000059,2.63e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0.495056999523528,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.404421263125109,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0.886068179966986,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.255788742607303,0,0,0.218419276384028,0.848662649770126,0.637724760305049,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0.314231179832004,0.560544326627578,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0.252332849670158,0.546327859818478,0.633492505057185,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0.495056999523528,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.404421263125109,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0.886068179966986,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.255788742607303,0,0,0.218419276384028,0.848662649770126,0.637724760305049,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0.314231179832004,0.560544326627578,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0.252332849670158,0.546327859818478,0.633492505057185,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:89925073..89925074,+ | |||
}} | }} |
Latest revision as of 03:26, 24 July 2015
Short description: | p@chr11:89925073..89925074, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:89925073..89925074, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.67e-66 | 4 |
epithelial cell of large intestine | 7.05e-34 | 2 |
epithelial cell of prostate | 2.62e-23 | 3 |
endo-epithelial cell | 3.52e-15 | 42 |
epithelial cell of alimentary canal | 2.76e-14 | 20 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.67e-66 | 4 |
wall of intestine | 4.67e-66 | 4 |
gastrointestinal system mucosa | 4.67e-66 | 4 |
gastrointestinal system epithelium | 4.67e-66 | 4 |
intestinal epithelium | 4.67e-66 | 4 |
epithelium of mucosa | 9.08e-34 | 8 |
simple columnar epithelium | 3.59e-30 | 9 |
rectum | 1.03e-17 | 4 |
intestine | 9.75e-16 | 17 |
hindgut | 5.27e-15 | 19 |
lower digestive tract | 1.83e-14 | 5 |
mucosa | 2.76e-14 | 20 |
gut epithelium | 4.68e-12 | 54 |
gastrointestinal system | 2.91e-11 | 25 |
colon | 1.21e-08 | 9 |
endo-epithelium | 2.70e-08 | 82 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
large intestine | 2.63e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |