FFCP PHASE1:Hg19::chr11:6461964..6461968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3263 | |EntrezGene=3263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5171 | |HGNC=5171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000527105_5end | |||
|cluster_id=chr11:6461964..6461968,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_HPX_5end | |||
|id=chr11:6461964..6461968,- | |||
|ontology_enrichment_celltype=CL:0000181!1.23e-15!12;CL:0000417!1.23e-15!12;CL:0000668!1.23e-15!12;CL:0000414!1.23e-15!12;CL:0000412!1.23e-15!12;CL:0000182!1.23e-15!12;CL:0000214!7.26e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.32e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.55e-11;11!UBERON:0009497;9.94e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.20e-26!19;UBERON:0006925!2.20e-26!19;UBERON:0008836!2.20e-26!19;UBERON:0008835!7.99e-23!22;UBERON:0003894!7.99e-23!22;UBERON:0009854!7.64e-22!23;UBERON:0007499!4.08e-20!25;UBERON:0009497!4.08e-20!25;UBERON:0000015!4.08e-20!25;UBERON:0002423!4.08e-20!25;UBERON:0006235!4.08e-20!25;UBERON:0004161!4.08e-20!25;UBERON:0005057!2.37e-19!26;UBERON:0009856!2.37e-19!26;UBERON:0002365!2.90e-16!31;UBERON:0002330!2.90e-16!31;UBERON:0002368!1.99e-14!35;UBERON:0000949!2.98e-11!45;UBERON:0002148!4.52e-11!2;UBERON:0009662!4.52e-11!2;UBERON:0003929!2.15e-09!54;UBERON:0005172!3.18e-09!55;UBERON:0005173!3.18e-09!55;UBERON:0002530!1.33e-08!59;UBERON:0002417!2.53e-08!61;UBERON:0000916!2.53e-08!61;UBERON:0006915!7.26e-08!3;UBERON:0002018!7.26e-08!3;UBERON:0002217!7.26e-08!3;UBERON:0007616!7.26e-08!3;UBERON:0000988!8.29e-08!3;UBERON:0006331!8.29e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.06e-37;19!UBERON:0006925;2.06e-37;19!UBERON:0002423;1.43e-28;25!UBERON:0002365;4.50e-23;31!UBERON:0002330;4.50e-23;31!UBERON:0002368;6.22e-20;33!UBERON:0000949;1.87e-14;43!UBERON:0005172;2.00e-10;52!UBERON:0005173;2.00e-10;52!UBERON:0002417;4.71e-08;58!UBERON:0000916;4.71e-08;58!UBERON:0002530;1.31e-07;57!UBERON:0001007;1.73e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.06e-37,19;UBERON:0006925,2.06e-37,19;UBERON:0008836,2.06e-37,19;UBERON:0008835,2.17e-32,22;UBERON:0003894,2.17e-32,22;UBERON:0009854,5.24e-31,23;UBERON:0007499,1.43e-28,25;UBERON:0009497,1.43e-28,25;UBERON:0000015,1.43e-28,25;UBERON:0002423,1.43e-28,25;UBERON:0006235,1.43e-28,25;UBERON:0004161,1.43e-28,25;UBERON:0009856,1.71e-27,26;UBERON:0002365,3.84e-23,31;UBERON:0002330,3.84e-23,31;UBERON:0002368,1.49e-20,35;UBERON:0000949,4.39e-16,45;UBERON:0003929,1.81e-13,54;UBERON:0005172,1.81e-13,54;UBERON:0005173,1.81e-13,54;UBERON:0002530,2.34e-12,59;UBERON:0002417,3.71e-12,60;UBERON:0000916,3.71e-12,60;UBERON:0005911,5.61e-09,82;UBERON:0001041,1.78e-08,87;UBERON:0005177,2.47e-07,101 | |||
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|short_description=p2@HPX | |||
}} | }} |
Latest revision as of 04:49, 19 September 2015
Short description: | p2@HPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HPX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000527105_5end |
EntrezGene: | HPX |
HGNC: | 5171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.79e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.06e-37 | 19 |
digestive gland | 2.06e-37 | 19 |
liver bud | 2.06e-37 | 19 |
hepatic diverticulum | 2.17e-32 | 22 |
liver primordium | 2.17e-32 | 22 |
digestive tract diverticulum | 5.24e-31 | 23 |
epithelial sac | 1.43e-28 | 25 |
epithelium of foregut-midgut junction | 1.43e-28 | 25 |
anatomical boundary | 1.43e-28 | 25 |
hepatobiliary system | 1.43e-28 | 25 |
foregut-midgut junction | 1.43e-28 | 25 |
septum transversum | 1.43e-28 | 25 |
sac | 1.71e-27 | 26 |
exocrine gland | 3.84e-23 | 31 |
exocrine system | 3.84e-23 | 31 |
endocrine gland | 1.49e-20 | 35 |
endocrine system | 4.39e-16 | 45 |
gut epithelium | 1.81e-13 | 54 |
abdomen element | 1.81e-13 | 54 |
abdominal segment element | 1.81e-13 | 54 |
gland | 2.34e-12 | 59 |
abdominal segment of trunk | 3.71e-12 | 60 |
abdomen | 3.71e-12 | 60 |
endo-epithelium | 5.61e-09 | 82 |
foregut | 1.78e-08 | 87 |
trunk region element | 2.47e-07 | 101 |