FFCP PHASE1:Hg19::chr11:60640829..60640871,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:60640829..60640871,+ to FFCP PHASE1:Hg19::chr11:60640829..60640871,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60640829..60640871,+ | |||
|coexpression_cluster_id=C3169 | |||
|description=CAGE_peak_at_chr11:60640829..60640871,+ | |||
|id=chr11:60640829..60640871,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.78e-25!180;CL:0000680!2.19e-23!57;CL:0000056!2.19e-23!57;CL:0000355!2.19e-23!57;CL:0000183!5.08e-23!59;CL:0000187!5.33e-22!54;CL:0000393!2.84e-18!60;CL:0000211!2.84e-18!60;CL:0000192!3.06e-16!42;CL:0000514!3.06e-16!42;CL:0000359!1.70e-10!32;CL:0000222!6.91e-09!119;CL:0000048!5.03e-07!430;CL:0002620!8.52e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000187;6.83e-12;55!CL:0002564;1.44e-11;3!CL:0002575;1.85e-08;2!CL:0002549;2.06e-08;2!CL:0002602;2.73e-08;2!CL:0002195;5.45e-08;2!CL:0002571;5.45e-08;2!CL:0002600;3.08e-07;2!CL:0000393;3.83e-07;61!CL:0000211;3.83e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.13e-14,55;CL:0000680,1.09e-13,58;CL:0000056,1.09e-13,58;CL:0000355,1.09e-13,58;CL:0000393,8.40e-13,61;CL:0000211,8.40e-13,61;CL:0002564,1.24e-11,3;CL:0002575,1.79e-08,2;CL:0002549,2.07e-08,2;CL:0000192,2.69e-08,43;CL:0000514,2.69e-08,43;CL:0002602,2.84e-08,2;CL:0002195,4.77e-08,2;CL:0002571,4.77e-08,2;CL:0002600,3.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000355;4.47e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!6.11e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.42e-23!70;UBERON:0001134!4.66e-23!61;UBERON:0002036!4.66e-23!61;UBERON:0003082!4.66e-23!61;UBERON:0002385!1.02e-22!63;UBERON:0001015!1.02e-22!63;UBERON:0000383!1.02e-22!63;UBERON:0000914!2.41e-22!83;UBERON:0002329!2.41e-22!83;UBERON:0003077!2.41e-22!83;UBERON:0003059!2.41e-22!83;UBERON:0007282!2.41e-22!83;UBERON:0009618!2.41e-22!83;UBERON:0007285!2.41e-22!83;UBERON:0000486!2.49e-18!82;UBERON:0005256!3.06e-15!143;UBERON:0000475!3.82e-13!365;UBERON:0000490!8.44e-13!138;UBERON:0000481!2.59e-08!347;UBERON:0000119!1.32e-07!312;UBERON:0002100!1.73e-07!216;UBERON:0001013!3.70e-07!14;UBERON:0000483!8.61e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.83e-18;5!UBERON:0002216;3.83e-18;5!UBERON:0011134;3.83e-18;5!UBERON:0002209;3.83e-18;5!UBERON:0002213;3.83e-18;5!UBERON:0007844;3.83e-18;5!UBERON:0011138;3.83e-18;5!UBERON:0001130;3.83e-18;5!UBERON:0001066;3.83e-18;5!UBERON:0001468;3.83e-18;5!UBERON:0002242;1.44e-11;3!UBERON:0005284;1.52e-11;5!UBERON:0004905;3.45e-11;8!UBERON:0000982;3.45e-11;8!UBERON:0004770;3.45e-11;8!UBERON:0006876;1.48e-10;11!UBERON:0005629;2.06e-08;2!UBERON:0005358;2.06e-08;2!UBERON:0001886;2.06e-08;2!UBERON:0004086;2.06e-08;2!UBERON:0005282;2.06e-08;2!UBERON:0005281;2.06e-08;2!UBERON:0006444;2.73e-08;2!UBERON:0001995;2.73e-08;2!UBERON:0004715;2.73e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.44e-18,5;UBERON:0002216,3.44e-18,5;UBERON:0011134,3.44e-18,5;UBERON:0002209,3.44e-18,5;UBERON:0002213,3.44e-18,5;UBERON:0005856,3.44e-18,5;UBERON:0005866,3.44e-18,5;UBERON:0005863,3.44e-18,5;UBERON:0007844,3.44e-18,5;UBERON:0011138,3.44e-18,5;UBERON:0001130,3.44e-18,5;UBERON:0001066,3.44e-18,5;UBERON:0001468,3.44e-18,5;UBERON:0001134,1.59e-12,62;UBERON:0002036,1.59e-12,62;UBERON:0003082,1.59e-12,62;UBERON:0002385,5.33e-12,64;UBERON:0001015,5.33e-12,64;UBERON:0000383,5.33e-12,64;UBERON:0002329,8.88e-12,71;UBERON:0003059,8.88e-12,71;UBERON:0007282,8.88e-12,71;UBERON:0004290,8.88e-12,71;UBERON:0009618,8.88e-12,71;UBERON:0005284,1.14e-11,5;UBERON:0002242,1.24e-11,3;UBERON:0003068,1.24e-11,3;UBERON:0002328,1.24e-11,3;UBERON:0004880,1.24e-11,3;UBERON:0003077,1.50e-11,72;UBERON:0007285,1.50e-11,72;UBERON:0007524,2.48e-11,73;UBERON:0004905,3.23e-11,8;UBERON:0000982,3.23e-11,8;UBERON:0004770,3.23e-11,8;UBERON:0006876,1.65e-10,11;UBERON:0007503,2.56e-10,78;UBERON:0003104,4.41e-10,160;UBERON:0009142,4.41e-10,160;UBERON:0000486,1.97e-09,83;UBERON:0005629,2.07e-08,2;UBERON:0005358,2.07e-08,2;UBERON:0001886,2.07e-08,2;UBERON:0004086,2.07e-08,2;UBERON:0005282,2.07e-08,2;UBERON:0005281,2.07e-08,2;UBERON:0006444,2.84e-08,2;UBERON:0001995,2.84e-08,2;UBERON:0004715,2.84e-08,2;UBERON:0005256,1.65e-07,122;UBERON:0000490,8.80e-07,148 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,1.04474251279935,0.737201809504527,0,0,0,4.20805600064159,8.61633176892581,0.672325146451775,0.602694528023977,1.46062018077475,1.46379839637152,0.492484232307152,2.24400760368678,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,0,0.50133791063589,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0.74000264525148,0,0,0,6.81108424402191,11.5235184896,0.234321431833797,0.624320153660641,0.570471821544449,0.298897361103602,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0.929932030581889,0,0,0,4.31170885089743,0,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.213557388818567,1.48352330811693,0,0.515262646192195,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,1.00973509697646,0.644349290496095,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,1.20097467208968,0,0,0,0,0,0,2.88662684050547,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.897048674762886,1.30788020649984,0.2933531432838,0.129271715757778,7.15312891703765,0,0,0,0,0,0,2.7165818795048,1.62786481617433,0,1.30294473717494,3.55391948742546,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,19.0064798002677,8.95174578209127,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0.921845842708516,0.173767228936166,9.20265440074881,9.60801586670397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,1.07834031980251,1.22802939780904,0.413509717453592,2.47066563197029,2.17525040871343,0.767039646744908,0.178064071293475,0,0,0,0,2.32422774648643,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,4.46590043231601,1.58189712359363,0.571890581771475,1.27948895655667,0.42793898803392,0.95460974377781,0.78494864019923,1.61885211824983,0.823611089208164,0.824686816419805,0.404364963146632,1.58510321173008,0.421258456238981,2.43816869544795,0.487426979262569,0,0.272999822815972,0,0,1.10273068709225,0,0.876901770507525,1.15755106853338,1.31178950409327,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,1.22439575525196,0,0,0,0,0,0.306806047506464,0,1.86623752597084,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0.392125068635479,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,3.42604811616877,3.17943378724783,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.305994652908965,0.577901179803038,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0.13480708770837,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,2.04465626142506,1.13312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0.37494122388632,0,0,0.235265819698172,0,0,1.04478362020812,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0.899606224327209,0.931577741257556,1.24411862352257,1.86089200190596,4.17396049449387,0.601030435988874,0.380805212168795,0.406870733204662,0.545545977607678,0.107410557042488,2.32016879939247,1.19428766609585,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0.512483037175893,0.345430341731199,0,0.138258436151731,0,0,0,0,5.16123108382811,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.918736432059601,0.128458450192919,1.41696576325585,0.638535436228605,0.205116364240755,0,0.276629009856872,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,9.0767280916584,0,0,0.327543835020193,0,0.0675375846183947,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0,0,0,1.07963795609311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| ||
|short_description=p@chr11:60640829..60640871,+ | |||
}} | }} |
Latest revision as of 23:17, 23 July 2015
Short description: | p@chr11:60640829..60640871, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60640829..60640871, + |
Coexpression cluster: | C3169_Nucleus_Fibroblast_pagetoid_Pericytes_Anulus_Mesenchymal_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.13e-14 | 55 |
muscle precursor cell | 1.09e-13 | 58 |
myoblast | 1.09e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-13 | 58 |
electrically responsive cell | 8.40e-13 | 61 |
electrically active cell | 8.40e-13 | 61 |
nucleus pulposus cell of intervertebral disc | 1.24e-11 | 3 |
central nervous system pericyte | 1.79e-08 | 2 |
fibroblast of choroid plexus | 2.07e-08 | 2 |
smooth muscle cell | 2.69e-08 | 43 |
smooth muscle myoblast | 2.69e-08 | 43 |
annulus pulposus cell | 2.84e-08 | 2 |
hepatic stem cell | 4.77e-08 | 2 |
hepatic mesenchymal stem cell | 4.77e-08 | 2 |
smooth muscle cell of trachea | 3.52e-07 | 2 |