FFCP PHASE1:Hg19::chr11:2160520..2160531,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2160520..2160531,- to FFCP PHASE1:Hg19::chr11:2160520..2160531,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=87bp_to_ENST00000416167_5end | |||
|cluster_id=chr11:2160520..2160531,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_50_at_IGF2_5end | |||
|id=chr11:2160520..2160531,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.15e-20;19!CL:0002537;5.82e-09;5!CL:0002541;1.12e-08;3!CL:0002577;4.22e-08;3!CL:0002575;8.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.22e-20,19;CL:0002537,6.93e-09,5;CL:0002541,1.40e-08,3;CL:0002577,2.92e-08,3;CL:0002575,8.00e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.73e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.26e-15!14;UBERON:0000158!2.26e-15!14;UBERON:0000478!4.81e-11!24;UBERON:0004119!3.31e-10!169;UBERON:0000925!3.31e-10!169;UBERON:0006595!3.31e-10!169;UBERON:0003124!1.41e-08!7;UBERON:0000305!2.01e-08!7;UBERON:0004921!4.97e-08!129;UBERON:0004185!4.97e-08!129;UBERON:0004871!4.04e-07!8;UBERON:0001007!4.13e-07!155;UBERON:0001555!4.13e-07!155;UBERON:0007026!4.13e-07!155;UBERON:0000077!6.60e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.46e-21;24!UBERON:0005631;2.14e-20;10!UBERON:0000158;2.14e-20;10!UBERON:0000305;1.62e-13;7!UBERON:0001987;2.09e-10;4!UBERON:0003124;1.12e-08;3!UBERON:0000920;1.12e-08;3!UBERON:0000922;1.09e-07;49!UBERON:0004151;1.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.34e-29,14;UBERON:0000158,4.34e-29,14;UBERON:0000478,2.50e-21,24;UBERON:0003124,1.76e-17,7;UBERON:0000305,2.05e-13,7;UBERON:0004871,1.24e-11,8;UBERON:0001987,1.34e-10,4;UBERON:0004340,1.34e-10,4;UBERON:0000920,1.40e-08,3;UBERON:0004151,1.49e-07,3;UBERON:0004923,6.34e-07,66 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,1.74467704820074,0,0,0,0.491467873003018,0,4.15038607047327,3.4289707169699,0.247532705920093,1.65698687863958,0,0,0,0,0,1.22400414746552,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,1.51357427644931,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0.877955241761676,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,2.82873408649161,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,1.74384027533312,0.1466765716419,0,0,0,0.531876233169741,2.08014873822732,0.257207374262142,2.83698264046557,0.266422179016099,0.428933980974443,8.68194568626309,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,1.62759014219841,0.623912584592421,0,0.157702415033935,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0,0,14.6850868097055,22.6474659715165,0,0,0,1.81876542867756,4.99306318531491,2.41912234663744,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,3.62578348774867,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.431831832204279,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0,1.13345112812495,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,2.04773681987496,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,1.14378116354295,0,1.28381696410176,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,1.31801321087491,2.15252686335615,1.68471475667626,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,4.92349595790849,0,0,0,0,1.31857361344705,0,0,2.84136146806413,7.87856799634377,4.15750553165694,9.52198176507619,0,0,0,0,0.211125408127993,0.996239941255349,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,1.38338342632836,0,0,8.29403015302991,1.28236630762607,30.3829822330622,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,26.48506236086,0,0,0,0,0,3.62972148145992,0.30607276163049,0.505492637027904,0,0.103688191397247,1.32930774541437,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,1.57254001417827,0,0,0,0,0.290967049465258,0.0882561266915003,1.35588444468319,0,0,0,0,0,0,4.19600180122473,0,0,8.40815489523626,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,2.15361907373044,0.399358000997982,0.429226048136571,0.89268582976749,1.74677028465488,0.360299883542404,0,3.30889365690339,2.63730746819733,2.42652757875066,2.65754200089822,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.524545881349981,0.211200673038813,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0.339936274560377,0,26.5013777824443,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0.756215088665154,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0,1.5913297769302,0.601682626794058,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,3.54809480650555,0,0,0,0,0,0.222462803784138,0.470958557103084,0,3.36326595976547,5.47895232305697,0,0,0.643288897589907,0.158013611732727,0,4.34645680756449,2.40513409419076,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,2.92603019957447,2.58971534875158,1.23195368227496,28.995360783455,14.5713297917742,0,4.57586782871147,0,0,0.109940516745429,0,0,0.874238242015829,0,0,0.471353094203252,0.196308467114945,0,2.5359343655004,0,0,0.515663103788617,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0.436350690340377,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.6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|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,1.74467704820074,0,0,0,0.491467873003018,0,4.15038607047327,3.4289707169699,0.247532705920093,1.65698687863958,0,0,0,0,0,1.22400414746552,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,1.51357427644931,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0.877955241761676,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,2.82873408649161,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,1.74384027533312,0.1466765716419,0,0,0,0.531876233169741,2.08014873822732,0.257207374262142,2.83698264046557,0.266422179016099,0.428933980974443,8.68194568626309,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,1.62759014219841,0.623912584592421,0,0.157702415033935,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0,0,14.6850868097055,22.6474659715165,0,0,0,1.81876542867756,4.99306318531491,2.41912234663744,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,3.62578348774867,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.431831832204279,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0,1.13345112812495,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,2.04773681987496,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,1.14378116354295,0,1.28381696410176,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,1.31801321087491,2.15252686335615,1.68471475667626,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,4.92349595790849,0,0,0,0,1.31857361344705,0,0,2.84136146806413,7.87856799634377,4.15750553165694,9.52198176507619,0,0,0,0,0.211125408127993,0.996239941255349,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,1.38338342632836,0,0,8.29403015302991,1.28236630762607,30.3829822330622,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,26.48506236086,0,0,0,0,0,3.62972148145992,0.30607276163049,0.505492637027904,0,0.103688191397247,1.32930774541437,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,1.57254001417827,0,0,0,0,0.290967049465258,0.0882561266915003,1.35588444468319,0,0,0,0,0,0,4.19600180122473,0,0,8.40815489523626,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,2.15361907373044,0.399358000997982,0.429226048136571,0.89268582976749,1.74677028465488,0.360299883542404,0,3.30889365690339,2.63730746819733,2.42652757875066,2.65754200089822,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.524545881349981,0.211200673038813,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0.339936274560377,0,26.5013777824443,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0.756215088665154,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0,1.5913297769302,0.601682626794058,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,3.54809480650555,0,0,0,0,0,0.222462803784138,0.470958557103084,0,3.36326595976547,5.47895232305697,0,0,0.643288897589907,0.158013611732727,0,4.34645680756449,2.40513409419076,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,2.92603019957447,2.58971534875158,1.23195368227496,28.995360783455,14.5713297917742,0,4.57586782871147,0,0,0.109940516745429,0,0,0.874238242015829,0,0,0.471353094203252,0.196308467114945,0,2.5359343655004,0,0,0.515663103788617,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0.436350690340377,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.6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| ||
|short_description=p50@IGF2 | |||
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Latest revision as of 08:47, 17 September 2015
Short description: | p50@IGF2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 87bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.22e-20 | 19 |
amnion mesenchymal stem cell | 6.93e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
placental epithelial cell | 2.92e-08 | 3 |
central nervous system pericyte | 8.00e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.34e-29 | 14 |
membranous layer | 4.34e-29 | 14 |
extraembryonic structure | 2.50e-21 | 24 |
chorion | 1.76e-17 | 7 |
amnion | 2.05e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.24e-11 | 8 |
placenta | 1.34e-10 | 4 |
allantois | 1.34e-10 | 4 |
egg chorion | 1.40e-08 | 3 |
cardiac chamber | 1.49e-07 | 3 |
organ component layer | 6.34e-07 | 66 |