FFCP PHASE1:Hg19::chr11:2018956..2018969,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2018956..2018969,- to FFCP PHASE1:Hg19::chr11:2018956..2018969,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_ENST00000411754,ENST00000422826_5end | |||
|cluster_id=chr11:2018956..2018969,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_15_at_H19_5end | |||
|id=chr11:2018956..2018969,- | |||
|ontology_enrichment_celltype=CL:0000188!6.60e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.83e-17;19!CL:0002577;8.36e-08;3!CL:0002541;1.65e-07;3!CL:0002537;2.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.09e-17,19;CL:0002577,8.29e-08,3;CL:0002541,1.55e-07,3;CL:0002537,2.62e-07,5;CL:0000188,9.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.52e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.05e-14!14;UBERON:0000158!1.05e-14!14;UBERON:0000478!3.14e-13!24;UBERON:0001737!4.03e-11!9;UBERON:0001557!4.22e-11!19;UBERON:0004923!1.48e-10!57;UBERON:0003124!1.39e-09!7;UBERON:0003104!1.06e-07!238;UBERON:0009142!1.06e-07!238;UBERON:0000063!1.57e-07!97;UBERON:0004119!1.67e-07!169;UBERON:0000925!1.67e-07!169;UBERON:0006595!1.67e-07!169;UBERON:0000077!3.15e-07!130;UBERON:0000305!7.09e-07!7;UBERON:0004921!7.56e-07!129;UBERON:0004185!7.56e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.73e-18;9!UBERON:0001557;5.73e-18;9!UBERON:0000478;2.23e-17;24!UBERON:0001134;3.03e-17;16!UBERON:0002036;3.03e-17;16!UBERON:0005631;6.13e-17;10!UBERON:0000158;6.13e-17;10!UBERON:0000305;3.31e-11;7!UBERON:0001987;1.68e-09;4!UBERON:0003124;1.65e-07;3!UBERON:0000920;1.65e-07;3!UBERON:0003688;1.83e-07;6!UBERON:0002358;1.83e-07;6!UBERON:0003684;1.83e-07;6!UBERON:0001178;1.83e-07;6!UBERON:0001723;2.10e-07;3!UBERON:0001033;2.10e-07;3!UBERON:0002385;2.21e-07;31!UBERON:0001015;2.21e-07;31!UBERON:0000383;2.21e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.25e-24,14;UBERON:0000158,1.25e-24,14;UBERON:0001737,5.05e-18,9;UBERON:0000478,2.52e-17,24;UBERON:0003124,2.25e-15,7;UBERON:0001557,8.49e-14,19;UBERON:0000305,4.17e-11,7;UBERON:0004871,1.35e-09,8;UBERON:0001987,1.63e-09,4;UBERON:0004340,1.63e-09,4;UBERON:0004923,3.52e-09,66;UBERON:0000920,1.55e-07,3;UBERON:0001723,2.13e-07,3;UBERON:0001033,2.13e-07,3;UBERON:0010056,2.13e-07,3;UBERON:0000072,2.67e-07,47;UBERON:0003688,2.94e-07,6;UBERON:0002358,2.94e-07,6;UBERON:0003684,2.94e-07,6;UBERON:0001178,2.94e-07,6 | |||
|phase1_expression=3.63356758541113,2.35510576280081,0.986680828671798,3.00219895059391,3.12872766099101,18.3191090061077,0,0,0,1.22866968250754,3.48900583986214,24.2469923064491,15.5622517154788,0.247532705920093,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,2.01260960310899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37971383272372,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,1.51357427644931,2.88087962239999,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,5.67872640191251,6.57480291304597,6.26628677697053,6.17646247301406,6.31850387867978,4.98268300133303,10.9213359609733,5.69042248863504,6.54070166808864,0.738155454624648,0,2.8810180793198,17.641045366265,0,0,0,0,0,0,0,0,0,2.22212268380471,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,78.1375111763678,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,2.17171960001369,3.90405012845728,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0.271265023699736,0,0,0,0.117141414992713,0,0,5.17365356462525,0,0,0,21.5381273209015,29.5103344477336,0,0,0,35.4659258592124,56.588049433569,21.772101119737,3.47350930946288,0.306923946576125,2.52594084989766,1.28139149255701,1.02341449813341,1.12597744800525,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,4.62681758070868,0,0,0,0,0,0,0,0,0.328014645699706,0,1.13345112812495,0,0,0,0,0,1.93341436584244,0.616194468458578,1.38153307253517,1.24052915236078,0.537101224341368,1.45016693914229,1.36362603865761,7.83481913691289,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,1.2655176988749,0.38126038784765,0.511795582622668,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.4568913566015,39.7932672315736,237.435222722706,0,0,0,0,0.211125408127993,0.597743964753209,0,5.2905877049398,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0.227586896570999,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.23056390438806,10.8606749735824,10.1042055887468,70.4992563007542,3.75550132947635,279.843257409783,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.067401132980677,20.0644411824697,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.22308667769421,0,0,0,0,0.193978032976839,0.0882561266915003,1.80784592624426,0,0,0,0.391102765469606,0,0.213452994739353,107.697379564768,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,2.57535628881943,0.89268582976749,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,27.8264466715665,0,0,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,37.6026098783364,1.03018711554838,0.336749488765919,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,3.98951802167723,0,3.05786986937639,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0.550285795565037,31.5385068590423,0,0,0,0.300841313397029,0,0,18.3334686136996,0,0.739280431085226,0,0,0,0,0,0,2.48105589194647,0,0.255524855279191,0,0,0,0,4.70122561861986,0,0.171488009437418,0,0,0,0,0.313972371402056,0,3.36326595976547,8.21842848458546,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,1.29068207646083,0,0,1.27016115057279,5.72767171360125,0,0,0,0,0,7.76914604625474,1.7452677165562,17.397216470073,4.37139893753226,0,0,0,0,0,0,0,2.40415516554353,0.940634592723046,0,0.471353094203252,0,0,1.2679671827502,0,0.0939839179798536,1.67590508731301,0,0.71421575442263,0,0,0,0.458729283404541,0,0.315543124386369,0,0,10.0515099697926,0,0.462175628631418,6.05677186973305,0,0.109265571963696,0,0.101988829741982,0,0,0,0.227336094654718,0.535928260312357,0,0,5.11761556562354,5.95161078659351,0.0645889098360061,0.124149428591716,0,0,2.02117188958219,5.660635445321,15.7427318499229,0.336760265072938,0.143444410785353,6.32054677437425,0.162806537221949,0,0,0,2.34640942403454,0.488965776731466,1.62758471326295,0.665756774185513,0.402547587182052,0 | |phase1_expression=3.63356758541113,2.35510576280081,0.986680828671798,3.00219895059391,3.12872766099101,18.3191090061077,0,0,0,1.22866968250754,3.48900583986214,24.2469923064491,15.5622517154788,0.247532705920093,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,2.01260960310899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37971383272372,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,1.51357427644931,2.88087962239999,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,5.67872640191251,6.57480291304597,6.26628677697053,6.17646247301406,6.31850387867978,4.98268300133303,10.9213359609733,5.69042248863504,6.54070166808864,0.738155454624648,0,2.8810180793198,17.641045366265,0,0,0,0,0,0,0,0,0,2.22212268380471,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,78.1375111763678,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,2.17171960001369,3.90405012845728,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0.271265023699736,0,0,0,0.117141414992713,0,0,5.17365356462525,0,0,0,21.5381273209015,29.5103344477336,0,0,0,35.4659258592124,56.588049433569,21.772101119737,3.47350930946288,0.306923946576125,2.52594084989766,1.28139149255701,1.02341449813341,1.12597744800525,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,4.62681758070868,0,0,0,0,0,0,0,0,0.328014645699706,0,1.13345112812495,0,0,0,0,0,1.93341436584244,0.616194468458578,1.38153307253517,1.24052915236078,0.537101224341368,1.45016693914229,1.36362603865761,7.83481913691289,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,1.2655176988749,0.38126038784765,0.511795582622668,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.4568913566015,39.7932672315736,237.435222722706,0,0,0,0,0.211125408127993,0.597743964753209,0,5.2905877049398,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0.227586896570999,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.23056390438806,10.8606749735824,10.1042055887468,70.4992563007542,3.75550132947635,279.843257409783,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.067401132980677,20.0644411824697,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.22308667769421,0,0,0,0,0.193978032976839,0.0882561266915003,1.80784592624426,0,0,0,0.391102765469606,0,0.213452994739353,107.697379564768,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,2.57535628881943,0.89268582976749,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,27.8264466715665,0,0,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,37.6026098783364,1.03018711554838,0.336749488765919,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,3.98951802167723,0,3.05786986937639,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0.550285795565037,31.5385068590423,0,0,0,0.300841313397029,0,0,18.3334686136996,0,0.739280431085226,0,0,0,0,0,0,2.48105589194647,0,0.255524855279191,0,0,0,0,4.70122561861986,0,0.171488009437418,0,0,0,0,0.313972371402056,0,3.36326595976547,8.21842848458546,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,1.29068207646083,0,0,1.27016115057279,5.72767171360125,0,0,0,0,0,7.76914604625474,1.7452677165562,17.397216470073,4.37139893753226,0,0,0,0,0,0,0,2.40415516554353,0.940634592723046,0,0.471353094203252,0,0,1.2679671827502,0,0.0939839179798536,1.67590508731301,0,0.71421575442263,0,0,0,0.458729283404541,0,0.315543124386369,0,0,10.0515099697926,0,0.462175628631418,6.05677186973305,0,0.109265571963696,0,0.101988829741982,0,0,0,0.227336094654718,0.535928260312357,0,0,5.11761556562354,5.95161078659351,0.0645889098360061,0.124149428591716,0,0,2.02117188958219,5.660635445321,15.7427318499229,0.336760265072938,0.143444410785353,6.32054677437425,0.162806537221949,0,0,0,2.34640942403454,0.488965776731466,1.62758471326295,0.665756774185513,0.402547587182052,0 | ||
|short_description=p15@H19 | |||
}} | }} |
Latest revision as of 06:57, 17 September 2015
Short description: | p15@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 57bp_to_ENST00000411754, ENST00000422826_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.09e-17 | 19 |
placental epithelial cell | 8.29e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.55e-07 | 3 |
amnion mesenchymal stem cell | 2.62e-07 | 5 |
cell of skeletal muscle | 9.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.25e-24 | 14 |
membranous layer | 1.25e-24 | 14 |
larynx | 5.05e-18 | 9 |
extraembryonic structure | 2.52e-17 | 24 |
chorion | 2.25e-15 | 7 |
upper respiratory tract | 8.49e-14 | 19 |
amnion | 4.17e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.35e-09 | 8 |
placenta | 1.63e-09 | 4 |
allantois | 1.63e-09 | 4 |
organ component layer | 3.52e-09 | 66 |
egg chorion | 1.55e-07 | 3 |
tongue | 2.13e-07 | 3 |
gustatory system | 2.13e-07 | 3 |
future tongue | 2.13e-07 | 3 |
segment of respiratory tract | 2.67e-07 | 47 |
omentum | 2.94e-07 | 6 |
peritoneum | 2.94e-07 | 6 |
abdominal cavity | 2.94e-07 | 6 |
visceral peritoneum | 2.94e-07 | 6 |