FFCP PHASE1:Hg19::chr11:19736307..19736327,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:19736307..19736327,- to FFCP PHASE1:Hg19::chr11:19736307..19736327,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100126784 | |EntrezGene=100126784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-89bp_to_NR_015384_5end | |||
|cluster_id=chr11:19736307..19736327,- | |||
|description=CAGE_peak_2_at_LOC100126784_5end | |||
|id=chr11:19736307..19736327,- | |||
|ontology_enrichment_celltype=CL:0000222!3.08e-19!119;CL:0002139!3.61e-16!24;CL:0000115!2.00e-14!35;CL:0002078!2.05e-13!44;CL:0000071!1.07e-11!18;CL:0002546!1.07e-11!18;CL:0000213!1.41e-11!57;CL:0000215!1.41e-11!57;CL:0000055!1.34e-10!180;CL:0000359!1.14e-08!32;CL:1000497!5.22e-08!18;CL:0002518!5.22e-08!18;CL:0000183!5.82e-08!59;CL:0000192!5.84e-08!42;CL:0000514!5.84e-08!42;CL:0000680!8.66e-08!57;CL:0000056!8.66e-08!57;CL:0000355!8.66e-08!57;CL:0000187!7.24e-07!54;CL:1000413!8.04e-07!9;CL:1000449!8.67e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.00e-23;24!CL:0000115;8.29e-18;36!CL:0000071;6.40e-16;18!CL:0002078;7.52e-14;45!CL:1000497;2.75e-13;17!CL:0002518;2.75e-13;17!CL:1000449;2.85e-11;15!CL:0000213;2.15e-10;58!CL:0000215;2.15e-10;58!CL:0002138;7.32e-09;6!CL:1000507;1.24e-08;10!CL:1000494;1.24e-08;10!CL:0002681;1.25e-08;12!CL:0002584;1.25e-08;12!CL:0000359;1.71e-08;32!CL:1000413;1.77e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.30e-23,24;CL:0000222,3.23e-23,121;CL:0000115,8.77e-22,36;CL:0002078,2.07e-19,45;CL:0000213,5.24e-18,58;CL:0000215,5.24e-18,58;CL:0000071,1.89e-16,18;CL:0002546,1.89e-16,18;CL:1000497,4.68e-13,17;CL:0002518,4.68e-13,17;CL:1000449,4.96e-11,15;CL:0005020,6.85e-09,6;CL:0002138,6.85e-09,6;CL:0005022,6.85e-09,6;CL:1000413,1.36e-08,9;CL:1000507,1.56e-08,10;CL:1000494,1.56e-08,10;CL:0000359,1.59e-08,32;CL:0002681,2.08e-08,12;CL:0002584,2.08e-08,12;CL:0002321,4.81e-08,250;CL:0000192,1.84e-07,43;CL:0000514,1.84e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;6.40e-16;18!CL:0005022;7.32e-09;6!CL:0000222;2.66e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.43e-36!286;UBERON:0004111!1.31e-35!241;UBERON:0000025!6.16e-34!194;UBERON:0000055!9.39e-29!69;UBERON:0002049!5.19e-27!79;UBERON:0007798!5.19e-27!79;UBERON:0000119!9.58e-27!312;UBERON:0000483!9.55e-26!309;UBERON:0004872!4.80e-25!84;UBERON:0001981!5.58e-24!60;UBERON:0007500!5.58e-24!60;UBERON:0004537!5.58e-24!60;UBERON:0006965!5.58e-24!60;UBERON:0003914!1.44e-23!118;UBERON:0001009!3.53e-21!113;UBERON:0004535!6.32e-21!110;UBERON:0001637!2.25e-18!42;UBERON:0003509!2.25e-18!42;UBERON:0004572!2.25e-18!42;UBERON:0003075!1.22e-16!86;UBERON:0007284!1.22e-16!86;UBERON:0004573!7.12e-16!33;UBERON:0004571!7.12e-16!33;UBERON:0001049!3.38e-15!57;UBERON:0005068!3.38e-15!57;UBERON:0006241!3.38e-15!57;UBERON:0007135!3.38e-15!57;UBERON:0002346!1.23e-14!90;UBERON:0000481!2.68e-14!347;UBERON:0000467!5.91e-14!625;UBERON:0000480!9.30e-14!626;UBERON:0000468!1.14e-13!659;UBERON:0005743!2.01e-13!86;UBERON:0000073!5.73e-13!94;UBERON:0001016!5.73e-13!94;UBERON:0000475!7.36e-13!365;UBERON:0001017!2.22e-12!82;UBERON:0002780!3.36e-12!41;UBERON:0001890!3.36e-12!41;UBERON:0006240!3.36e-12!41;UBERON:0002616!3.89e-12!59;UBERON:0001986!1.07e-11!18;UBERON:0004638!1.07e-11!18;UBERON:0004852!1.07e-11!18;UBERON:0003056!1.13e-11!61;UBERON:0003080!1.55e-11!42;UBERON:0002020!1.55e-11!34;UBERON:0003528!1.55e-11!34;UBERON:0000487!2.42e-11!22;UBERON:0001893!4.89e-11!34;UBERON:0002791!1.38e-10!33;UBERON:0003103!1.41e-10!69;UBERON:0001869!2.10e-10!32;UBERON:0004121!3.68e-10!169;UBERON:0000955!3.96e-10!69;UBERON:0006238!3.96e-10!69;UBERON:0000947!6.92e-10!21;UBERON:0010191!6.92e-10!21;UBERON:0007023!8.58e-10!115;UBERON:0006914!9.04e-10!25;UBERON:0000064!1.87e-09!219;UBERON:0000924!3.48e-09!173;UBERON:0006601!3.48e-09!173;UBERON:0002619!5.49e-09!22;UBERON:0000033!6.11e-09!123;UBERON:0001950!8.57e-09!20;UBERON:0000490!9.73e-09!138;UBERON:0002050!1.15e-08!605;UBERON:0005423!1.15e-08!605;UBERON:0000923!1.42e-08!604;UBERON:0005291!1.42e-08!604;UBERON:0006598!1.42e-08!604;UBERON:0002532!1.42e-08!604;UBERON:0000922!1.57e-08!612;UBERON:0000956!2.25e-08!25;UBERON:0000203!2.25e-08!25;UBERON:0000153!4.10e-08!129;UBERON:0007811!4.10e-08!129;UBERON:0007100!1.68e-07!27;UBERON:0000948!2.14e-07!24;UBERON:0005498!2.14e-07!24;UBERON:0004140!2.14e-07!24;UBERON:0009881!2.14e-07!24;UBERON:0004141!2.14e-07!24;UBERON:0003084!2.14e-07!24;UBERON:0007005!2.14e-07!24;UBERON:0004139!2.14e-07!24;UBERON:0004291!2.14e-07!24;UBERON:0001473!2.46e-07!8;UBERON:0004536!2.46e-07!8;UBERON:0006558!2.46e-07!8;UBERON:0003915!8.04e-07!9;UBERON:0004700!8.04e-07!9;UBERON:0001917!8.04e-07!9;UBERON:0004876!8.15e-07!20;UBERON:0006555!8.31e-07!17;UBERON:0005103!8.31e-07!17;UBERON:0000083!8.31e-07!17;UBERON:0009201!8.31e-07!17;UBERON:0004819!8.31e-07!17;UBERON:0006553!8.31e-07!17;UBERON:0003074!8.31e-07!17;UBERON:0003060!8.31e-07!17;UBERON:0004211!8.67e-07!16;UBERON:0001285!8.67e-07!16;UBERON:0007684!8.67e-07!16;UBERON:0003220!8.67e-07!16;UBERON:0004208!8.67e-07!16 | |||
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| ||
|short_description=p2@LOC100126784 | |||
}} | }} |
Latest revision as of 05:22, 17 September 2015
Short description: | p2@LOC100126784 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100126784_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_NR_015384_5end |
EntrezGene: | LOC100126784 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.30e-23 | 24 |
mesodermal cell | 3.23e-23 | 121 |
endothelial cell | 8.77e-22 | 36 |
meso-epithelial cell | 2.07e-19 | 45 |
lining cell | 5.24e-18 | 58 |
barrier cell | 5.24e-18 | 58 |
blood vessel endothelial cell | 1.89e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.89e-16 | 18 |
kidney cell | 4.68e-13 | 17 |
kidney epithelial cell | 4.68e-13 | 17 |
epithelial cell of nephron | 4.96e-11 | 15 |
lymphangioblast | 6.85e-09 | 6 |
endothelial cell of lymphatic vessel | 6.85e-09 | 6 |
vascular lymphangioblast | 6.85e-09 | 6 |
endothelial cell of artery | 1.36e-08 | 9 |
kidney tubule cell | 1.56e-08 | 10 |
nephron tubule epithelial cell | 1.56e-08 | 10 |
vascular associated smooth muscle cell | 1.59e-08 | 32 |
kidney cortical cell | 2.08e-08 | 12 |
renal cortical epithelial cell | 2.08e-08 | 12 |
embryonic cell | 4.81e-08 | 250 |
smooth muscle cell | 1.84e-07 | 43 |
smooth muscle myoblast | 1.84e-07 | 43 |