FFCP PHASE1:Hg19::chr10:88428476..88428490,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:88428476..88428490,+ to FFCP PHASE1:Hg19::chr10:88428476..88428490,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11155 | |EntrezGene=11155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15710 | |HGNC=15710 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_uc001kdt.2,uc009xsz.2_5end | |||
|cluster_id=chr10:88428476..88428490,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_7_at_LDB3_5end | |||
|id=chr10:88428476..88428490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.32e-12;1!UBERON:0010226;1.32e-12;1!UBERON:0004874;1.96e-12;1!UBERON:0000358;3.64e-12;1!UBERON:0005062;7.31e-12;4!UBERON:0007284;7.31e-12;4!UBERON:0003104;1.55e-08;31!UBERON:0006603;2.66e-07;65!UBERON:0008814;6.24e-07;2!UBERON:0010056;6.24e-07;2 | |||
|ontology_enrichment_disease=DOID:114!1.63e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.59e-23;2!DOID:178;1.96e-12;1!DOID:326;1.96e-12;1!DOID:3978;1.96e-12;1!DOID:3394;1.96e-12;1!DOID:5844;1.96e-12;1!DOID:1287;2.92e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.59e-23,2;DOID:178,1.96e-12,1;DOID:326,1.96e-12,1;DOID:3978,1.96e-12,1;DOID:3394,1.96e-12,1;DOID:5844,1.96e-12,1;DOID:1287,2.92e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-53!115;UBERON:0001049!1.57e-21!57;UBERON:0005068!1.57e-21!57;UBERON:0006241!1.57e-21!57;UBERON:0007135!1.57e-21!57;UBERON:0003075!1.20e-18!86;UBERON:0007284!1.20e-18!86;UBERON:0002346!1.53e-17!90;UBERON:0005743!1.24e-16!86;UBERON:0001017!3.68e-16!82;UBERON:0002616!1.21e-14!59;UBERON:0000073!1.61e-14!94;UBERON:0001016!1.61e-14!94;UBERON:0002780!7.37e-14!41;UBERON:0001890!7.37e-14!41;UBERON:0006240!7.37e-14!41;UBERON:0003080!1.87e-13!42;UBERON:0000955!3.25e-13!69;UBERON:0006238!3.25e-13!69;UBERON:0001893!1.07e-12!34;UBERON:0002020!1.08e-12!34;UBERON:0003528!1.08e-12!34;UBERON:0000153!1.39e-12!129;UBERON:0007811!1.39e-12!129;UBERON:0001869!1.63e-11!32;UBERON:0002791!3.51e-11!33;UBERON:0002240!4.05e-11!3;UBERON:0000033!4.30e-11!123;UBERON:0004121!1.19e-10!169;UBERON:0000924!3.03e-10!173;UBERON:0006601!3.03e-10!173;UBERON:0003076!8.11e-10!15;UBERON:0003057!8.11e-10!15;UBERON:0004111!9.88e-10!241;UBERON:0003056!1.48e-09!61;UBERON:0003103!3.06e-09!69;UBERON:0002308!9.24e-09!9;UBERON:0000125!9.24e-09!9;UBERON:0001630!1.32e-08!2;UBERON:0005090!1.32e-08!2;UBERON:0000025!1.33e-08!194;UBERON:0000341!2.78e-08!2;UBERON:0000477!3.35e-08!286;UBERON:0001875!8.43e-08!2;UBERON:0006514!8.43e-08!2;UBERON:0002619!8.62e-08!22;UBERON:0007100!2.76e-07!27;UBERON:0002148!3.09e-07!2;UBERON:0009662!3.09e-07!2;UBERON:0000483!5.33e-07!309;UBERON:0000119!7.51e-07!312;UBERON:0005174!8.07e-07!5;UBERON:0001137!8.07e-07!5;UBERON:0000956!9.55e-07!25;UBERON:0000203!9.55e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;8.01e-24;2!UBERON:0001630;8.01e-24;2!UBERON:0000341;8.55e-23;2!UBERON:0007100;4.28e-21;25!UBERON:0001723;4.81e-16;3!UBERON:0001033;4.81e-16;3!UBERON:0004151;5.80e-16;3!UBERON:0003978;1.71e-15;3!UBERON:0000946;1.71e-15;3!UBERON:0001389;8.35e-13;1!UBERON:0000026;8.35e-13;1!UBERON:0008784;8.35e-13;1!UBERON:0006058;8.35e-13;1!UBERON:0002426;8.35e-13;1!UBERON:0003831;8.35e-13;1!UBERON:0003898;8.35e-13;1!UBERON:0004830;8.35e-13;1!UBERON:0003663;8.35e-13;1!UBERON:0004256;8.35e-13;1!UBERON:0004708;8.35e-13;1!UBERON:0002101;8.35e-13;1!UBERON:0004709;8.35e-13;1!UBERON:0003830;8.35e-13;1!UBERON:0005175;8.35e-13;1!UBERON:0002529;8.35e-13;1!UBERON:0010538;8.35e-13;1!UBERON:0003661;8.35e-13;1!UBERON:0010890;8.35e-13;1!UBERON:0002471;8.35e-13;1!UBERON:0001774;8.35e-13;1!UBERON:0001383;8.35e-13;1!UBERON:0010758;8.35e-13;1!UBERON:0010707;8.35e-13;1!UBERON:0001103;8.35e-13;1!UBERON:0000978;8.35e-13;1!UBERON:0002103;8.35e-13;1!UBERON:0001665;8.35e-13;1!UBERON:0003823;8.35e-13;1!UBERON:0000154;8.35e-13;1!UBERON:0010709;8.35e-13;1!UBERON:0002084;1.32e-12;1!UBERON:0002079;1.32e-12;1!UBERON:0002082;1.32e-12;1!UBERON:0000989;1.96e-12;1!UBERON:0002146;1.96e-12;1!UBERON:0008811;1.96e-12;1!UBERON:0005623;1.96e-12;1!UBERON:0002135;4.55e-12;1!UBERON:0001134;1.76e-11;16!UBERON:0002036;1.76e-11;16!UBERON:0000948;2.75e-08;22!UBERON:0000974;3.13e-08;6!UBERON:0002081;6.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,8.02e-24,2;UBERON:0001630,8.02e-24,2;UBERON:0000341,8.55e-23,2;UBERON:0007100,1.84e-19,27;UBERON:0001723,4.99e-16,3;UBERON:0001033,4.99e-16,3;UBERON:0010056,4.99e-16,3;UBERON:0004151,6.26e-16,3;UBERON:0003978,1.91e-15,3;UBERON:0009751,1.91e-15,3;UBERON:0000946,1.91e-15,3;UBERON:0002523,1.91e-15,3;UBERON:0005983,1.91e-15,3;UBERON:0002165,1.91e-15,3;UBERON:0002062,1.91e-15,3;UBERON:0007280,1.91e-15,3;UBERON:0003103,5.82e-15,68;UBERON:0007023,1.50e-14,114;UBERON:0002426,7.89e-13,1;UBERON:0003831,7.89e-13,1;UBERON:0003898,7.89e-13,1;UBERON:0004830,7.89e-13,1;UBERON:0003830,7.89e-13,1;UBERON:0005175,7.89e-13,1;UBERON:0001774,7.89e-13,1;UBERON:0001103,7.89e-13,1;UBERON:0010084,7.89e-13,1;UBERON:0005418,8.85e-13,1;UBERON:0001389,8.85e-13,1;UBERON:0000026,8.85e-13,1;UBERON:0008784,8.85e-13,1;UBERON:0006058,8.85e-13,1;UBERON:0003663,8.85e-13,1;UBERON:0004256,8.85e-13,1;UBERON:0004708,8.85e-13,1;UBERON:0002101,8.85e-13,1;UBERON:0004709,8.85e-13,1;UBERON:0002529,8.85e-13,1;UBERON:0010538,8.85e-13,1;UBERON:0003661,8.85e-13,1;UBERON:0010890,8.85e-13,1;UBERON:0002471,8.85e-13,1;UBERON:0001383,8.85e-13,1;UBERON:0004357,8.85e-13,1;UBERON:0004347,8.85e-13,1;UBERON:0005420,8.85e-13,1;UBERON:0005732,8.85e-13,1;UBERON:0010758,8.85e-13,1;UBERON:0010707,8.85e-13,1;UBERON:0000978,8.85e-13,1;UBERON:0002103,8.85e-13,1;UBERON:0001665,8.85e-13,1;UBERON:0003823,8.85e-13,1;UBERON:0000154,8.85e-13,1;UBERON:0010709,8.85e-13,1;UBERON:0005733,8.85e-13,1;UBERON:0005730,8.85e-13,1;UBERON:0002084,1.25e-12,1;UBERON:0002082,1.25e-12,1;UBERON:0010226,1.25e-12,1;UBERON:0002079,1.57e-12,1;UBERON:0000989,1.75e-12,1;UBERON:0008811,1.75e-12,1;UBERON:0006258,1.75e-12,1;UBERON:0005876,1.75e-12,1;UBERON:0004874,1.75e-12,1;UBERON:0002146,2.20e-12,1;UBERON:0005623,2.20e-12,1;UBERON:0002135,4.81e-12,1;UBERON:0000948,1.36e-07,24;UBERON:0005498,1.36e-07,24;UBERON:0004140,1.36e-07,24;UBERON:0009881,1.36e-07,24;UBERON:0004141,1.36e-07,24;UBERON:0003084,1.36e-07,24;UBERON:0007005,1.36e-07,24;UBERON:0004139,1.36e-07,24;UBERON:0004291,1.36e-07,24;UBERON:0004797,3.91e-07,7;UBERON:0002081,6.80e-07,2;UBERON:0010227,6.80e-07,2 | |||
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|short_description=p7@LDB3 | |||
}} | }} |
Latest revision as of 17:35, 19 September 2015
Short description: | p7@LDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LDB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 50bp_to_uc001kdt.2, uc009xsz.2_5end |
EntrezGene: | LDB3 |
HGNC: | 15710 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.59e-23 | 2 |
vascular disease | 1.96e-12 | 1 |
ischemia | 1.96e-12 | 1 |
extrinsic cardiomyopathy | 1.96e-12 | 1 |
myocardial ischemia | 1.96e-12 | 1 |
myocardial infarction | 1.96e-12 | 1 |
cardiovascular system disease | 2.92e-12 | 4 |