FFCP PHASE1:Hg19::chr10:82049368..82049379,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:82049368..82049379,- to FFCP PHASE1:Hg19::chr10:82049368..82049379,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4143 | |EntrezGene=4143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6903 | |HGNC=6903 | ||
|TSSclassifier=strong | |||
|UniProt=Q00266 | |UniProt=Q00266 | ||
|association_with_transcript=54bp_to_NM_000429,uc001kbw.2_5end | |||
|cluster_id=chr10:82049368..82049379,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_MAT1A_5end | |||
|id=chr10:82049368..82049379,- | |||
|ontology_enrichment_celltype=CL:0000181!2.81e-13!12;CL:0000417!2.81e-13!12;CL:0000668!2.81e-13!12;CL:0000414!2.81e-13!12;CL:0000412!2.81e-13!12;CL:0000182!2.81e-13!12;CL:0000223!8.55e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.16e-46;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.17e-46,12;CL:0000223,2.43e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.39e-35;11!UBERON:0009497;1.58e-29;13!UBERON:0001041;7.42e-13;30!UBERON:0003104;2.01e-12;31!UBERON:0007297;8.09e-09;2!CL:0000223;3.66e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.92e-14!19;UBERON:0006925!2.92e-14!19;UBERON:0008836!2.92e-14!19;UBERON:0002368!2.37e-13!35;UBERON:0008835!4.01e-12!22;UBERON:0003894!4.01e-12!22;UBERON:0000949!7.67e-12!45;UBERON:0009854!1.55e-11!23;UBERON:0007499!1.68e-10!25;UBERON:0009497!1.68e-10!25;UBERON:0000015!1.68e-10!25;UBERON:0002423!1.68e-10!25;UBERON:0006235!1.68e-10!25;UBERON:0004161!1.68e-10!25;UBERON:0005057!4.83e-10!26;UBERON:0009856!4.83e-10!26;UBERON:0002530!2.32e-08!59;UBERON:0002365!3.36e-08!31;UBERON:0002330!3.36e-08!31;UBERON:0003929!8.37e-08!54;UBERON:0006947!9.47e-07!3;UBERON:0004054!9.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.54e-51;19!UBERON:0006925;4.54e-51;19!UBERON:0002423;1.01e-38;25!UBERON:0002365;5.82e-30;31!UBERON:0002330;5.82e-30;31!UBERON:0002368;2.00e-26;33!UBERON:0000949;4.04e-23;43!UBERON:0001301;2.63e-16;1!UBERON:0005172;1.42e-11;52!UBERON:0005173;1.42e-11;52!UBERON:0002417;3.53e-10;58!UBERON:0000916;3.53e-10;58!UBERON:0002530;4.71e-10;57!UBERON:0001007;3.82e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.55e-51,19;UBERON:0006925,4.55e-51,19;UBERON:0008836,4.55e-51,19;UBERON:0008835,4.69e-44,22;UBERON:0003894,4.69e-44,22;UBERON:0009854,4.01e-42,23;UBERON:0007499,1.01e-38,25;UBERON:0009497,1.01e-38,25;UBERON:0000015,1.01e-38,25;UBERON:0002423,1.01e-38,25;UBERON:0006235,1.01e-38,25;UBERON:0004161,1.01e-38,25;UBERON:0009856,3.24e-37,26;UBERON:0002365,3.83e-31,31;UBERON:0002330,3.83e-31,31;UBERON:0002368,1.57e-27,35;UBERON:0000949,7.94e-27,45;UBERON:0005172,2.96e-22,54;UBERON:0005173,2.96e-22,54;UBERON:0002417,5.83e-20,60;UBERON:0000916,5.83e-20,60;UBERON:0003929,1.17e-17,54;UBERON:0001301,2.63e-16,1;UBERON:0002530,4.12e-16,59;UBERON:0005177,2.90e-14,101;UBERON:0005911,2.04e-11,82;UBERON:0001041,1.01e-10,87;UBERON:0009569,2.50e-10,112;UBERON:0003914,7.52e-10,117;UBERON:0005256,2.07e-09,122;UBERON:0004921,1.20e-07,118;UBERON:0003104,5.83e-07,160;UBERON:0009142,5.83e-07,160;UBERON:0002100,9.71e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,4.91413608338813,14.7697476670351,0,0.860919069801795,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,4.3330750268973,4.28562463582066,4.78565161364713,0,0.423366660328922,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1121041237877,9.27548222385549,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0.20170506870352,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,4.91413608338813,14.7697476670351,0,0.860919069801795,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,4.3330750268973,4.28562463582066,4.78565161364713,0,0.423366660328922,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1121041237877,9.27548222385549,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0.20170506870352,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@MAT1A | |||
}} | }} |
Latest revision as of 15:08, 19 September 2015
Short description: | p4@MAT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAT1A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 54bp_to_NM_000429, uc001kbw.2_5end |
EntrezGene: | MAT1A |
HGNC: | 6903 |
UniProt: | Q00266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.17e-46 | 12 |
endodermal cell | 2.43e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.55e-51 | 19 |
digestive gland | 4.55e-51 | 19 |
liver bud | 4.55e-51 | 19 |
hepatic diverticulum | 4.69e-44 | 22 |
liver primordium | 4.69e-44 | 22 |
digestive tract diverticulum | 4.01e-42 | 23 |
epithelial sac | 1.01e-38 | 25 |
epithelium of foregut-midgut junction | 1.01e-38 | 25 |
anatomical boundary | 1.01e-38 | 25 |
hepatobiliary system | 1.01e-38 | 25 |
foregut-midgut junction | 1.01e-38 | 25 |
septum transversum | 1.01e-38 | 25 |
sac | 3.24e-37 | 26 |
exocrine gland | 3.83e-31 | 31 |
exocrine system | 3.83e-31 | 31 |
endocrine gland | 1.57e-27 | 35 |
endocrine system | 7.94e-27 | 45 |
abdomen element | 2.96e-22 | 54 |
abdominal segment element | 2.96e-22 | 54 |
abdominal segment of trunk | 5.83e-20 | 60 |
abdomen | 5.83e-20 | 60 |
gut epithelium | 1.17e-17 | 54 |
epididymis | 2.63e-16 | 1 |
gland | 4.12e-16 | 59 |
trunk region element | 2.90e-14 | 101 |
endo-epithelium | 2.04e-11 | 82 |
foregut | 1.01e-10 | 87 |
subdivision of trunk | 2.50e-10 | 112 |
epithelial tube | 7.52e-10 | 117 |
trunk mesenchyme | 2.07e-09 | 122 |
subdivision of digestive tract | 1.20e-07 | 118 |
mesenchyme | 5.83e-07 | 160 |
entire embryonic mesenchyme | 5.83e-07 | 160 |
trunk | 9.71e-07 | 199 |