FFCP PHASE1:Hg19::chr10:101945771..101945795,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:101945771..101945795,- to FFCP PHASE1:Hg19::chr10:101945771..101945795,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10613 | |EntrezGene=10613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16947 | |HGNC=16947 | ||
|TSSclassifier=strong | |||
|UniProt=B0QZ43,O75477 | |UniProt=B0QZ43,O75477 | ||
|association_with_transcript=0bp_to_ENST00000370408,ENST00000370410,ENST00000407654_5end | |||
|cluster_id=chr10:101945771..101945795,- | |||
|description=CAGE_peak_1_at_ERLIN1_5end | |||
|id=chr10:101945771..101945795,- | |||
|ontology_enrichment_celltype=CL:0000055!5.26e-23!180;CL:0000057!2.21e-17!75;CL:0000220!2.19e-15!246;CL:0002321!4.43e-15!248;CL:0000066!3.24e-13!254;CL:0000222!6.86e-13!119;CL:0000548!2.05e-12!679;CL:0000004!2.05e-12!679;CL:0000255!2.05e-12!679;CL:0000012!7.22e-12!682;CL:0002620!4.42e-09!23;CL:0000144!2.31e-08!625;CL:0000680!5.47e-08!57;CL:0000056!5.47e-08!57;CL:0000355!5.47e-08!57;CL:0000192!1.53e-07!42;CL:0000514!1.53e-07!42;CL:0000076!1.65e-07!62;CL:0000359!3.81e-07!32;CL:0000187!4.96e-07!54;CL:0002371!5.63e-07!591;CL:0000213!9.77e-07!57;CL:0000215!9.77e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.63e-09;23!CL:0000057;2.04e-07;73!CL:0000359;5.16e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.80e-17,76;CL:0002321,2.95e-15,250;CL:0000066,2.19e-13,253;CL:0000222,5.04e-13,121;CL:0002620,4.42e-09,23;CL:0000076,9.65e-08,63;CL:0000680,1.07e-07,58;CL:0000056,1.07e-07,58;CL:0000355,1.07e-07,58;CL:0000192,3.37e-07,43;CL:0000514,3.37e-07,43;CL:0000359,3.81e-07,32;CL:0000213,4.13e-07,58;CL:0000215,4.13e-07,58;CL:0000187,9.30e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.08e-16!216;UBERON:0000490!8.74e-14!138;UBERON:0005256!1.69e-13!143;UBERON:0003104!8.21e-13!238;UBERON:0009142!8.21e-13!238;UBERON:0003914!2.10e-12!118;UBERON:0003102!6.60e-11!95;UBERON:0004119!1.26e-10!169;UBERON:0000925!1.26e-10!169;UBERON:0006595!1.26e-10!169;UBERON:0000914!2.63e-10!83;UBERON:0002329!2.63e-10!83;UBERON:0003077!2.63e-10!83;UBERON:0003059!2.63e-10!83;UBERON:0007282!2.63e-10!83;UBERON:0009618!2.63e-10!83;UBERON:0007285!2.63e-10!83;UBERON:0000486!2.78e-10!82;UBERON:0002049!3.60e-10!79;UBERON:0007798!3.60e-10!79;UBERON:0000055!7.44e-10!69;UBERON:0004872!8.79e-10!84;UBERON:0000475!1.45e-09!365;UBERON:0001981!2.34e-09!60;UBERON:0007500!2.34e-09!60;UBERON:0004537!2.34e-09!60;UBERON:0006965!2.34e-09!60;UBERON:0001007!4.11e-09!155;UBERON:0001555!4.11e-09!155;UBERON:0007026!4.11e-09!155;UBERON:0004290!1.23e-08!70;UBERON:0001637!1.25e-08!42;UBERON:0003509!1.25e-08!42;UBERON:0004572!1.25e-08!42;UBERON:0004923!1.73e-08!57;UBERON:0000466!2.22e-08!126;UBERON:0002199!3.97e-08!45;UBERON:0002416!3.97e-08!45;UBERON:0002097!5.07e-08!40;UBERON:0000926!9.17e-08!448;UBERON:0004120!9.17e-08!448;UBERON:0006603!9.17e-08!448;UBERON:0008835!3.13e-07!22;UBERON:0003894!3.13e-07!22;UBERON:0001048!4.41e-07!168;UBERON:0000481!4.75e-07!347;UBERON:0002365!5.02e-07!31;UBERON:0002330!5.02e-07!31;UBERON:0000468!5.66e-07!659;UBERON:0009497!6.13e-07!25;UBERON:0000015!6.13e-07!25;UBERON:0002423!6.13e-07!25;UBERON:0006235!6.13e-07!25;UBERON:0004161!6.13e-07!25;UBERON:0007499!7.56e-07!25;UBERON:0009854!8.42e-07!23;UBERON:0005911!9.30e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.11e-07;42!UBERON:0003509;2.11e-07;42!UBERON:0004572;2.11e-07;42!UBERON:0002423;6.37e-07;25!UBERON:0002365;9.42e-07;31!UBERON:0002330;9.42e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.43e-16,148;UBERON:0002100,7.28e-15,199;UBERON:0005256,8.47e-13,122;UBERON:0003914,1.15e-12,117;UBERON:0003104,8.78e-12,160;UBERON:0009142,8.78e-12,160;UBERON:0003102,1.80e-11,99;UBERON:0002049,3.30e-10,78;UBERON:0007798,3.30e-10,78;UBERON:0000486,5.32e-10,83;UBERON:0000055,6.69e-10,68;UBERON:0004923,6.95e-10,66;UBERON:0004872,8.22e-10,83;UBERON:0007500,2.07e-09,59;UBERON:0001981,2.07e-09,59;UBERON:0004537,2.07e-09,59;UBERON:0006965,2.07e-09,59;UBERON:0004119,4.25e-09,160;UBERON:0000925,4.25e-09,160;UBERON:0006595,4.25e-09,160;UBERON:0001637,1.25e-08,42;UBERON:0003509,1.25e-08,42;UBERON:0004572,1.25e-08,42;UBERON:0002199,2.21e-08,46;UBERON:0002416,2.21e-08,46;UBERON:0002329,2.29e-08,71;UBERON:0003059,2.29e-08,71;UBERON:0007282,2.29e-08,71;UBERON:0004290,2.29e-08,71;UBERON:0009618,2.29e-08,71;UBERON:0002097,2.80e-08,41;UBERON:0007503,4.80e-08,78;UBERON:0007524,5.89e-08,73;UBERON:0003077,6.32e-08,72;UBERON:0007285,6.32e-08,72;UBERON:0001007,7.89e-08,145;UBERON:0001555,7.89e-08,145;UBERON:0007026,7.89e-08,145;UBERON:0008835,3.13e-07,22;UBERON:0003894,3.13e-07,22;UBERON:0002365,5.02e-07,31;UBERON:0002330,5.02e-07,31;UBERON:0009497,6.13e-07,25;UBERON:0000015,6.13e-07,25;UBERON:0002423,6.13e-07,25;UBERON:0006235,6.13e-07,25;UBERON:0004161,6.13e-07,25;UBERON:0007499,7.56e-07,25;UBERON:0009854,8.42e-07,23;UBERON:0005911,9.18e-07,82 | |||
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| ||
|short_description=p1@ERLIN1 | |||
}} | }} |
Latest revision as of 19:55, 15 September 2015
Short description: | p1@ERLIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ERLIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370408, ENST00000370410, ENST00000407654_5end |
EntrezGene: | ERLIN1 |
HGNC: | 16947 |
UniProt: | B0QZ43O75477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.80e-17 | 76 |
embryonic cell | 2.95e-15 | 250 |
epithelial cell | 2.19e-13 | 253 |
mesodermal cell | 5.04e-13 | 121 |
skin fibroblast | 4.42e-09 | 23 |
squamous epithelial cell | 9.65e-08 | 63 |
muscle precursor cell | 1.07e-07 | 58 |
myoblast | 1.07e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-07 | 58 |
smooth muscle cell | 3.37e-07 | 43 |
smooth muscle myoblast | 3.37e-07 | 43 |
vascular associated smooth muscle cell | 3.81e-07 | 32 |
lining cell | 4.13e-07 | 58 |
barrier cell | 4.13e-07 | 58 |
muscle cell | 9.30e-07 | 55 |