FFCP PHASE1:Mm9::chrX:130646345..130646353,-: Difference between revisions
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|id=chrX:130646345..130646353,-
|short_description=p4@Nox1
|description=CAGE_peak_4_at_Nox1_5end
|association_with_transcript=39bp_to_ENSMUST00000033610,uc009ufm.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=237038 | |EntrezGene=237038 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=457 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CIZ9 | |UniProt=Q8CIZ9 | ||
|association_with_transcript=39bp_to_ENSMUST00000033610,uc009ufm.1_5end | |||
|cluster_id=chrX:130646345..130646353,- | |||
|description=CAGE_peak_4_at_Nox1_5end | |||
|id=chrX:130646345..130646353,- | |||
|ontology_enrichment_celltype=CL:0002563!2.26e-11!9;CL:0002251!2.26e-11!9;CL:0000473!5.08e-10!3;CL:0000627!5.08e-10!3;CL:0000682!5.08e-10!3;CL:0000239!3.15e-08!6;CL:0000677!3.15e-08!6;CL:0000212!3.15e-08!6;CL:0000584!3.15e-08!6;CL:0000066!3.31e-08!25;CL:0000075!4.80e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.30e-21,3;CL:0002563,1.24e-18,9;CL:0002251,1.24e-18,9;CL:0000239,3.01e-18,6;CL:0000677,3.01e-18,6;CL:0000584,3.01e-18,6;CL:0000066,8.72e-17,25;CL:0000473,5.35e-16,7;CL:0000075,1.08e-15,7;CL:0002076,3.40e-11,15;CL:0000223,2.18e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.14e-21!15;UBERON:0001242!7.42e-17!13;UBERON:0000060!7.42e-17!13;UBERON:0001262!7.42e-17!13;UBERON:0004786!7.42e-17!13;UBERON:0000160!2.10e-15!43;UBERON:0004923!1.11e-12!24;UBERON:0005409!1.01e-11!59;UBERON:0003350!2.26e-11!9;UBERON:0004808!2.26e-11!9;UBERON:0001277!2.26e-11!9;UBERON:0000331!2.96e-09!3;UBERON:0002116!2.96e-09!3;UBERON:0001204!2.96e-09!3;UBERON:0001168!2.96e-09!3;UBERON:0000485!3.58e-09!11;UBERON:0001007!2.14e-08!128;UBERON:0001555!2.14e-08!128;UBERON:0007026!2.14e-08!128;UBERON:0004119!3.47e-08!130;UBERON:0000925!3.47e-08!130;UBERON:0006595!3.47e-08!130;UBERON:0001962!8.14e-07!2;UBERON:0001961!8.14e-07!2;UBERON:0001744!8.14e-07!2;UBERON:0004921!9.32e-07!126;UBERON:0004185!9.32e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.09e-21,15;UBERON:0003350,1.24e-18,9;UBERON:0004808,1.24e-18,9;UBERON:0001277,1.24e-18,9;UBERON:0001242,1.51e-18,13;UBERON:0001262,1.51e-18,13;UBERON:0004786,1.51e-18,13;UBERON:0000485,2.94e-15,11;UBERON:0004923,2.13e-13,24;UBERON:0000160,3.11e-10,31;UBERON:0005409,1.54e-08,47;UBERON:0001153,5.62e-08,1;UBERON:0001045,5.62e-08,1 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,0,0,2.35030980676646,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,2.07990149631429,0.68822784320151,2.29692785646008,2.58457197695445,4.09395342103189,0.570070258369122,0.252030129759931,8.86922042621219,0,0,0,1.44425809875637,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.36499771816861,0,0,2.35030980676646,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,2.07990149631429,0.68822784320151,2.29692785646008,2.58457197695445,4.09395342103189,0.570070258369122,0.252030129759931,8.86922042621219,0,0,0,1.44425809875637,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Nox1 | |||
}} | }} |
Latest revision as of 14:07, 1 October 2015
Short description: | p4@Nox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | 39bp_to_ENSMUST00000033610, uc009ufm.1_5end |
EntrezGene: | Nox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.30e-21 | 3 |
intestinal epithelial cell | 1.24e-18 | 9 |
epithelial cell of alimentary canal | 1.24e-18 | 9 |
brush border epithelial cell | 3.01e-18 | 6 |
gut absorptive cell | 3.01e-18 | 6 |
enterocyte | 3.01e-18 | 6 |
epithelial cell | 8.72e-17 | 25 |
defensive cell | 5.35e-16 | 7 |
columnar/cuboidal epithelial cell | 1.08e-15 | 7 |
endo-epithelial cell | 3.40e-11 | 15 |
endodermal cell | 2.18e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.09e-21 | 15 |
epithelium of mucosa | 1.24e-18 | 9 |
gastrointestinal system epithelium | 1.24e-18 | 9 |
intestinal epithelium | 1.24e-18 | 9 |
intestinal mucosa | 1.51e-18 | 13 |
wall of intestine | 1.51e-18 | 13 |
gastrointestinal system mucosa | 1.51e-18 | 13 |
simple columnar epithelium | 2.94e-15 | 11 |
organ component layer | 2.13e-13 | 24 |
intestine | 3.11e-10 | 31 |
gastrointestinal system | 1.54e-08 | 47 |
caecum | 5.62e-08 | 1 |
midgut | 5.62e-08 | 1 |