FFCP PHASE1:Mm9::chr9:21116780..21116789,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:21116780..21116789,-
|short_description=p2@Ap1m2
|description=CAGE_peak_2_at_Ap1m2_5end
|association_with_transcript=-3bp_to_ENSMUST00000003397,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11768 | |EntrezGene=11768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=297 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVP1 | |UniProt=Q9WVP1 | ||
|association_with_transcript=-3bp_to_ENSMUST00000003397,ENSMUST00000115433,NM_001110300,NM_009678,uc009okx.2,uc009oky.2,uc012gpe.1_5end | |||
|cluster_id=chr9:21116780..21116789,- | |||
|description=CAGE_peak_2_at_Ap1m2_5end | |||
|id=chr9:21116780..21116789,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-09,25;CL:0002076,1.49e-09,15;CL:0002563,3.39e-09,9;CL:0002251,3.39e-09,9;CL:0000075,1.99e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.86e-18!43;UBERON:0005409!2.89e-17!59;UBERON:0004119!5.06e-10!130;UBERON:0000925!5.06e-10!130;UBERON:0006595!5.06e-10!130;UBERON:0001007!2.36e-09!128;UBERON:0001555!2.36e-09!128;UBERON:0007026!2.36e-09!128;UBERON:0004921!9.37e-09!126;UBERON:0004185!9.37e-09!126;UBERON:0000344!2.53e-08!15;UBERON:0001242!1.18e-07!13;UBERON:0000060!1.18e-07!13;UBERON:0001262!1.18e-07!13;UBERON:0004786!1.18e-07!13;UBERON:0000485!2.82e-07!11;UBERON:0002108!9.56e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.31e-19,31;UBERON:0005409,1.08e-14,47;UBERON:0000485,7.79e-12,11;UBERON:0001242,4.08e-11,13;UBERON:0001262,4.08e-11,13;UBERON:0004786,4.08e-11,13;UBERON:0000344,8.67e-11,15;UBERON:0003350,3.39e-09,9;UBERON:0004808,3.39e-09,9;UBERON:0001277,3.39e-09,9;UBERON:0004923,5.78e-08,24 | |||
|phase1_expression=3.36312578920067,1.39590163055744,1.36499771816861,1.20985684522732,1.00179145989269,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,1.14704640533585,0.57423196411502,2.15380998079537,2.15471232685889,1.90023419456374,1.26015064879965,2.66076612786366,0,0,0,2.59966457776147,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,4.08445917352373,0,0,0,1.5154372870785,2.53359865475099,5.05524445014783,0.45673551887624,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0,0.712875546952214,0.124406970610093,1.76905930903572,1.05220927943237,0,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.85115396664481,0,0.464473343720877,0.902072229254653,2.01683524623343,2.66853652613844,3.42406127002606,1.42358718463353,3.29397909448022,5.7807098024062,4.57599885694647,4.67913809085888,0.898819408654221,1.51296634912286,0.796565093017469,0.948339504765408,0.114248512609729,1.1270773567308,1.22190796707189,0.387904974335251,0.911765658574141,1.07502113111237,1.03327103585722,1.255989822731,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,0.167506257441816,0.476087281772027,1.17080188714679,0.157635144106191,0.8858587585951,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,1.24645922567079,0.488660878060728,1.31976098378028,2.65490276679926,1.69946445308487,2.11626489875326,1.32023555829129,0.885905678642318,0.307435147943927,3.10113951801865,2.18120237686503,1.06949213515416,2.21225730555071,0,0,2.04263763452273,1.08036656418786,0.646793418913773,1.28602221018955,1.06404140185364,0.891844088010353,1.48094118541909,1.8267896946876,0.704015124191131,2.1183207086382,1.32317038832977,0.49465875882444,1.61464426695906,1.14594557363496,2.14870219205646,1.47726809770555,2.04036585640896,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,1.18805874903981,0.418176592028937,0.655087691238533,0.944050424693745,1.07449492442937,2.35580347785627,1.55537967950151,1.24267862617385,0,0,0,0.777804753376191,0.387479470433193,0.337912250981556,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,2.02725215290164,0.718976700153791,0.649604114888975,0,0,0.841368146639782,0,0.100966449948148,0.304827226619999,0,0.194915761479505,0.288635524920988,0.350630706544707,1.58711268530648,0.221985953374065,0,0.503653849092235,0.386379188064381,0.93841237725591,1.46521299413812,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0.824171801606613,0.147198920134397,1.37147700954166,0.354951612318675,0.715308569841963,0.581385666529314,0.752875043322645,0.592302255241736,0.182927972872773,1.05227884575137,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,1.35034627686799,0.749431733813838,0.701794825336225,0.644613162144895,0,0,0 | |phase1_expression=3.36312578920067,1.39590163055744,1.36499771816861,1.20985684522732,1.00179145989269,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,1.14704640533585,0.57423196411502,2.15380998079537,2.15471232685889,1.90023419456374,1.26015064879965,2.66076612786366,0,0,0,2.59966457776147,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,4.08445917352373,0,0,0,1.5154372870785,2.53359865475099,5.05524445014783,0.45673551887624,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0,0.712875546952214,0.124406970610093,1.76905930903572,1.05220927943237,0,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.85115396664481,0,0.464473343720877,0.902072229254653,2.01683524623343,2.66853652613844,3.42406127002606,1.42358718463353,3.29397909448022,5.7807098024062,4.57599885694647,4.67913809085888,0.898819408654221,1.51296634912286,0.796565093017469,0.948339504765408,0.114248512609729,1.1270773567308,1.22190796707189,0.387904974335251,0.911765658574141,1.07502113111237,1.03327103585722,1.255989822731,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,0.167506257441816,0.476087281772027,1.17080188714679,0.157635144106191,0.8858587585951,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,1.24645922567079,0.488660878060728,1.31976098378028,2.65490276679926,1.69946445308487,2.11626489875326,1.32023555829129,0.885905678642318,0.307435147943927,3.10113951801865,2.18120237686503,1.06949213515416,2.21225730555071,0,0,2.04263763452273,1.08036656418786,0.646793418913773,1.28602221018955,1.06404140185364,0.891844088010353,1.48094118541909,1.8267896946876,0.704015124191131,2.1183207086382,1.32317038832977,0.49465875882444,1.61464426695906,1.14594557363496,2.14870219205646,1.47726809770555,2.04036585640896,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,1.18805874903981,0.418176592028937,0.655087691238533,0.944050424693745,1.07449492442937,2.35580347785627,1.55537967950151,1.24267862617385,0,0,0,0.777804753376191,0.387479470433193,0.337912250981556,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,2.02725215290164,0.718976700153791,0.649604114888975,0,0,0.841368146639782,0,0.100966449948148,0.304827226619999,0,0.194915761479505,0.288635524920988,0.350630706544707,1.58711268530648,0.221985953374065,0,0.503653849092235,0.386379188064381,0.93841237725591,1.46521299413812,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0.824171801606613,0.147198920134397,1.37147700954166,0.354951612318675,0.715308569841963,0.581385666529314,0.752875043322645,0.592302255241736,0.182927972872773,1.05227884575137,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,1.35034627686799,0.749431733813838,0.701794825336225,0.644613162144895,0,0,0 | ||
|short_description=p2@Ap1m2 | |||
}} | }} |
Latest revision as of 11:11, 26 September 2015
Short description: | p2@Ap1m2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ap1m2_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | -3bp_to_ENSMUST00000003397, ENSMUST00000115433, NM_001110300, NM_009678, uc009okx.2, uc009oky.2, uc012gpe.1_5end |
EntrezGene: | Ap1m2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-09 | 25 |
endo-epithelial cell | 1.49e-09 | 15 |
intestinal epithelial cell | 3.39e-09 | 9 |
epithelial cell of alimentary canal | 3.39e-09 | 9 |
columnar/cuboidal epithelial cell | 1.99e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.31e-19 | 31 |
gastrointestinal system | 1.08e-14 | 47 |
simple columnar epithelium | 7.79e-12 | 11 |
intestinal mucosa | 4.08e-11 | 13 |
wall of intestine | 4.08e-11 | 13 |
gastrointestinal system mucosa | 4.08e-11 | 13 |
mucosa | 8.67e-11 | 15 |
epithelium of mucosa | 3.39e-09 | 9 |
gastrointestinal system epithelium | 3.39e-09 | 9 |
intestinal epithelium | 3.39e-09 | 9 |
organ component layer | 5.78e-08 | 24 |