FFCP PHASE1:Mm9::chr9:115219403..115219414,-: Difference between revisions
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|id=chr9:115219403..115219414,-
|short_description=p12@Stt3b
|description=CAGE_peak_12_at_Stt3b_5end
|association_with_transcript=124bp_to_ENSMUST00000035010,NM_024...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68292 | |EntrezGene=68292 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TDQ1 | |UniProt=Q3TDQ1 | ||
|association_with_transcript=124bp_to_ENSMUST00000035010,NM_024222,uc009ryp.1_5end | |||
|cluster_id=chr9:115219403..115219414,- | |||
|description=CAGE_peak_12_at_Stt3b_5end | |||
|id=chr9:115219403..115219414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.19e-19,6;CL:0000556,1.19e-19,6;CL:0000945,4.85e-14,1;CL:0000236,4.85e-14,1;CL:0000826,4.85e-14,1;CL:0000050,2.31e-13,9;CL:0000839,1.81e-09,13;CL:0002031,1.36e-08,25;CL:0000763,8.19e-08,16;CL:0000988,8.50e-07,32;CL:0002032,8.50e-07,32;CL:0000037,8.50e-07,32;CL:0000837,8.50e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.55e-13,1;UBERON:0001097,1.55e-13,1;UBERON:0003968,1.55e-13,1;UBERON:0001467,1.55e-13,1;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0000080,3.18e-13,4;UBERON:0005904,3.18e-13,4;UBERON:0006947,3.18e-13,4;UBERON:0002120,3.18e-13,4;UBERON:0004054,3.18e-13,4;UBERON:0004875,3.18e-13,4;UBERON:0004876,3.18e-13,4;UBERON:0005721,3.18e-13,4;UBERON:0005754,3.18e-13,4;UBERON:0007297,3.18e-13,4;UBERON:0000058,5.68e-08,7;UBERON:0002371,8.19e-08,16;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.422366166455,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0.607425802169478,0,5.8360500591274,3.15363197293199,4.66828616977833,0,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,4.69791296961662,0.725362142011344,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0.883885756421003,0.711858403995515,0.745597783301202,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,1.03575153458869,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.622034853050465,1.51633655060205,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.581857461502877,0.280543279561274,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.325929952884052,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0,0.849229592366497,0,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0.683483523191411,0.619160603889667,0,0,0.546776910884101,0.915112692826091,0.339956859987711,0,0.138199973804424,0,0.158167996790568,0,0,0.418176592028937,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.422366166455,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0.607425802169478,0,5.8360500591274,3.15363197293199,4.66828616977833,0,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,4.69791296961662,0.725362142011344,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0.883885756421003,0.711858403995515,0.745597783301202,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,1.03575153458869,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.622034853050465,1.51633655060205,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.581857461502877,0.280543279561274,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.325929952884052,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0,0.849229592366497,0,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0.683483523191411,0.619160603889667,0,0,0.546776910884101,0.915112692826091,0.339956859987711,0,0.138199973804424,0,0.158167996790568,0,0,0.418176592028937,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p12@Stt3b | |||
}} | }} |
Latest revision as of 07:14, 26 September 2015
Short description: | p12@Stt3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Stt3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 124bp_to_ENSMUST00000035010, NM_024222, uc009ryp.1_5end |
EntrezGene: | Stt3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.19e-19 | 6 |
megakaryocyte | 1.19e-19 | 6 |
lymphocyte of B lineage | 4.85e-14 | 1 |
B cell | 4.85e-14 | 1 |
pro-B cell | 4.85e-14 | 1 |
megakaryocyte-erythroid progenitor cell | 2.31e-13 | 9 |
myeloid lineage restricted progenitor cell | 1.81e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.36e-08 | 25 |
myeloid cell | 8.19e-08 | 16 |
hematopoietic cell | 8.50e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.50e-07 | 32 |
hematopoietic stem cell | 8.50e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.50e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.55e-13 | 1 |
axillary lymph node | 1.55e-13 | 1 |
peripheral lymph node | 1.55e-13 | 1 |
shoulder | 1.55e-13 | 1 |
seminal vesicle | 2.06e-13 | 1 |
vesicular gland | 2.06e-13 | 1 |
seminal fluid secreting gland | 2.06e-13 | 1 |
mesonephros | 3.18e-13 | 4 |
duct of male reproductive system | 3.18e-13 | 4 |
male genital duct | 3.18e-13 | 4 |
pronephros | 3.18e-13 | 4 |
internal male genitalia | 3.18e-13 | 4 |
nephrogenic cord | 3.18e-13 | 4 |
urogenital ridge | 3.18e-13 | 4 |
pronephric mesoderm | 3.18e-13 | 4 |
rostral part of nephrogenic cord | 3.18e-13 | 4 |
presumptive pronephric mesoderm | 3.18e-13 | 4 |
duct | 5.68e-08 | 7 |
bone marrow | 8.19e-08 | 16 |
male accessory sex gland | 2.35e-07 | 2 |
sex gland | 2.35e-07 | 2 |
male reproductive gland | 2.35e-07 | 2 |