FFCP PHASE1:Mm9::chr8:87473773..87473784,+: Difference between revisions
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|id=chr8:87473773..87473784,+
|short_description=p1@Rtbdn
|description=CAGE_peak_1_at_Rtbdn_5end
|association_with_transcript=14bp_to_ENSMUST00000121880,uc009moi.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=234542 | |EntrezGene=234542 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q8QZY4 | |UniProt=Q8QZY4 | ||
|association_with_transcript=14bp_to_ENSMUST00000121880,uc009moi.1_5end | |||
|cluster_id=chr8:87473773..87473784,+ | |||
|description=CAGE_peak_1_at_Rtbdn_5end | |||
|id=chr8:87473773..87473784,+ | |||
|ontology_enrichment_celltype=CL:0002611!8.97e-15!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.33e-15,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.44e-19!9;UBERON:0000019!4.44e-19!9;UBERON:0000047!4.44e-19!9;UBERON:0004088!4.44e-19!9;UBERON:0002104!4.44e-19!9;UBERON:0001456!4.44e-19!9;UBERON:0003072!4.44e-19!9;UBERON:0003071!4.44e-19!9;UBERON:0004128!4.44e-19!9;UBERON:0002240!1.07e-18!6;UBERON:0005174!1.07e-18!6;UBERON:0001137!1.07e-18!6;UBERON:0001444!1.27e-15!11;UBERON:0002256!8.97e-15!2;UBERON:0000020!2.54e-14!12;UBERON:0001032!2.54e-14!12;UBERON:0004456!2.54e-14!12;UBERON:0003076!3.07e-14!12;UBERON:0003057!3.07e-14!12;UBERON:0005085!3.20e-13!13;UBERON:0001948!5.04e-13!5;UBERON:0002315!5.04e-13!5;UBERON:0002346!1.34e-10!71;UBERON:0003075!1.34e-10!71;UBERON:0007284!1.34e-10!71;UBERON:0004121!5.22e-07!102;UBERON:0000924!5.22e-07!102;UBERON:0006601!5.22e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,1.33e-15,2;UBERON:0000970,4.91e-14,9;UBERON:0000019,4.91e-14,9;UBERON:0000047,4.91e-14,9;UBERON:0010312,4.91e-14,9;UBERON:0004088,4.91e-14,9;UBERON:0002104,4.91e-14,9;UBERON:0001456,4.91e-14,9;UBERON:0003072,4.91e-14,9;UBERON:0004128,4.91e-14,9;UBERON:0003071,4.91e-14,9;UBERON:0001444,1.07e-11,11;UBERON:0000020,8.07e-11,12;UBERON:0001032,8.07e-11,12;UBERON:0004456,8.07e-11,12;UBERON:0000033,4.49e-10,13;UBERON:0005085,4.49e-10,13;UBERON:0001948,4.77e-07,5;UBERON:0002315,4.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.220868540951614,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1911849980025,0,0,0,0,0.0680364991513279,0.12811372028485,0.937017245597288,82.785078636485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.220868540951614,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1911849980025,0,0,0,0,0.0680364991513279,0.12811372028485,0.937017245597288,82.785078636485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Rtbdn | |||
}} | }} |
Latest revision as of 22:09, 25 September 2015
Short description: | p1@Rtbdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rtbdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 14bp_to_ENSMUST00000121880, uc009moi.1_5end |
EntrezGene: | Rtbdn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.33e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 1.33e-15 | 2 |
eye | 4.91e-14 | 9 |
camera-type eye | 4.91e-14 | 9 |
simple eye | 4.91e-14 | 9 |
immature eye | 4.91e-14 | 9 |
ocular region | 4.91e-14 | 9 |
visual system | 4.91e-14 | 9 |
face | 4.91e-14 | 9 |
optic cup | 4.91e-14 | 9 |
optic vesicle | 4.91e-14 | 9 |
eye primordium | 4.91e-14 | 9 |
subdivision of head | 1.07e-11 | 11 |
sense organ | 8.07e-11 | 12 |
sensory system | 8.07e-11 | 12 |
entire sense organ system | 8.07e-11 | 12 |
head | 4.49e-10 | 13 |
ectodermal placode | 4.49e-10 | 13 |
regional part of spinal cord | 4.77e-07 | 5 |
gray matter of spinal cord | 4.77e-07 | 5 |