FFCP PHASE1:Mm9::chr8:46496339..46496357,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:46496339..46496357,-
|short_description=p4@Tlr3
|description=CAGE_peak_4_at_Tlr3_5end
|association_with_transcript=-377bp_to_ENSMUST00000167106_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=142980 | |EntrezGene=142980 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=Q99MB1 | |UniProt=Q99MB1 | ||
|association_with_transcript=-377bp_to_ENSMUST00000167106_5end | |||
|cluster_id=chr8:46496339..46496357,- | |||
|description=CAGE_peak_4_at_Tlr3_5end | |||
|id=chr8:46496339..46496357,- | |||
|ontology_enrichment_celltype=CL:0002563!1.30e-07!9;CL:0002251!1.30e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.92e-16,9;CL:0002251,3.92e-16,9;CL:0000239,6.88e-12,6;CL:0000677,6.88e-12,6;CL:0000584,6.88e-12,6;CL:0000066,1.93e-11,25;CL:0002076,7.71e-11,15;CL:0000075,4.54e-10,7;CL:0000223,3.63e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.59e-17!130;UBERON:0000925!6.59e-17!130;UBERON:0006595!6.59e-17!130;UBERON:0001007!7.99e-17!128;UBERON:0001555!7.99e-17!128;UBERON:0007026!7.99e-17!128;UBERON:0004921!1.50e-15!126;UBERON:0004185!1.50e-15!126;UBERON:0005409!1.66e-15!59;UBERON:0000160!7.46e-14!43;UBERON:0000344!1.81e-12!15;UBERON:0004923!5.55e-12!24;UBERON:0001242!6.48e-11!13;UBERON:0000060!6.48e-11!13;UBERON:0001262!6.48e-11!13;UBERON:0004786!6.48e-11!13;UBERON:0003350!1.30e-07!9;UBERON:0004808!1.30e-07!9;UBERON:0001277!1.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.41e-33,31;UBERON:0000344,7.71e-28,15;UBERON:0005409,1.59e-27,47;UBERON:0001242,4.38e-24,13;UBERON:0001262,4.38e-24,13;UBERON:0004786,4.38e-24,13;UBERON:0004923,4.60e-18,24;UBERON:0003350,3.92e-16,9;UBERON:0004808,3.92e-16,9;UBERON:0001277,3.92e-16,9;UBERON:0001007,5.97e-15,116;UBERON:0001555,5.97e-15,116;UBERON:0007026,5.97e-15,116;UBERON:0004119,1.52e-14,118;UBERON:0000925,1.52e-14,118;UBERON:0006595,1.52e-14,118;UBERON:0004921,5.15e-13,114;UBERON:0000485,7.31e-13,11;UBERON:0002108,2.60e-09,4;UBERON:0007023,1.49e-07,51;UBERON:0000331,1.93e-07,3;UBERON:0002116,1.93e-07,3;UBERON:0001204,1.93e-07,3;UBERON:0001168,1.93e-07,3;UBERON:0002465,4.70e-07,3 | |||
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| ||
|short_description=p4@Tlr3 | |||
}} | }} |
Latest revision as of 13:59, 25 September 2015
Short description: | p4@Tlr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tlr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | -377bp_to_ENSMUST00000167106_5end |
EntrezGene: | Tlr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.92e-16 | 9 |
epithelial cell of alimentary canal | 3.92e-16 | 9 |
brush border epithelial cell | 6.88e-12 | 6 |
gut absorptive cell | 6.88e-12 | 6 |
enterocyte | 6.88e-12 | 6 |
epithelial cell | 1.93e-11 | 25 |
endo-epithelial cell | 7.71e-11 | 15 |
columnar/cuboidal epithelial cell | 4.54e-10 | 7 |
endodermal cell | 3.63e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.41e-33 | 31 |
mucosa | 7.71e-28 | 15 |
gastrointestinal system | 1.59e-27 | 47 |
intestinal mucosa | 4.38e-24 | 13 |
wall of intestine | 4.38e-24 | 13 |
gastrointestinal system mucosa | 4.38e-24 | 13 |
organ component layer | 4.60e-18 | 24 |
epithelium of mucosa | 3.92e-16 | 9 |
gastrointestinal system epithelium | 3.92e-16 | 9 |
intestinal epithelium | 3.92e-16 | 9 |
digestive system | 5.97e-15 | 116 |
digestive tract | 5.97e-15 | 116 |
primitive gut | 5.97e-15 | 116 |
endoderm-derived structure | 1.52e-14 | 118 |
endoderm | 1.52e-14 | 118 |
presumptive endoderm | 1.52e-14 | 118 |
subdivision of digestive tract | 5.15e-13 | 114 |
simple columnar epithelium | 7.31e-13 | 11 |
small intestine | 2.60e-09 | 4 |
adult organism | 1.49e-07 | 51 |
ileal mucosa | 1.93e-07 | 3 |
ileum | 1.93e-07 | 3 |
mucosa of small intestine | 1.93e-07 | 3 |
wall of small intestine | 1.93e-07 | 3 |
lymphoid system | 4.70e-07 | 3 |