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FFCP PHASE1:Mm9::chr8:121970822..121970847,+: Difference between revisions

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(Created page with "{{FFCP |id=chr8:121970822..121970847,+ |short_description=p2@Necab2 |description=CAGE_peak_2_at_Necab2_5end |association_with_transcript=203bp_to_ENSMUST00000098363,NM_054...")
 
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{{FFCP
{{FFCP
|id=chr8:121970822..121970847,+
|DHSsupport=NA
|short_description=p2@Necab2
|DPIdataset=NA
|description=CAGE_peak_2_at_Necab2_5end
|association_with_transcript=203bp_to_ENSMUST00000098363,NM_054095,uc009npq.1_5end
|EntrezGene=117148
|EntrezGene=117148
|HGNC=
|HGNC=
|MCL_coexpression_id=1191
|TSSclassifier=NA
|UniProt=Q91ZP9
|UniProt=Q91ZP9
|association_with_transcript=203bp_to_ENSMUST00000098363,NM_054095,uc009npq.1_5end
|cluster_id=chr8:121970822..121970847,+
|description=CAGE_peak_2_at_Necab2_5end
|id=chr8:121970822..121970847,+
|ontology_enrichment_celltype=CL:0000117!4.91e-15!23;CL:0000337!4.91e-15!23;CL:0000540!4.28e-11!33;CL:0000047!4.28e-11!33;CL:0000031!4.28e-11!33;CL:0000404!4.28e-11!33;CL:0000221!5.98e-10!44;CL:0000133!5.98e-10!44;CL:0002319!1.72e-09!43;CL:0000393!7.45e-08!39;CL:0000211!7.45e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-25,23;CL:0000337,3.49e-25,23;CL:0000540,3.01e-16,33;CL:0000047,3.01e-16,33;CL:0000031,3.01e-16,33;CL:0000404,3.01e-16,33;CL:0002319,4.24e-13,43;CL:0000393,4.25e-13,39;CL:0000211,4.25e-13,39;CL:0000221,1.06e-12,44;CL:0000133,1.06e-12,44;CL:0002610,2.39e-08,3;CL:0002614,3.87e-08,3;CL:0002613,2.02e-07,3;CL:0002612,5.43e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.37e-29!71;UBERON:0003075!1.37e-29!71;UBERON:0007284!1.37e-29!71;UBERON:0000033!9.55e-27!63;UBERON:0004121!1.36e-26!102;UBERON:0000924!1.36e-26!102;UBERON:0006601!1.36e-26!102;UBERON:0001017!4.91e-25!73;UBERON:0005743!4.91e-25!73;UBERON:0000073!1.05e-23!75;UBERON:0001016!1.05e-23!75;UBERON:0001049!8.10e-23!52;UBERON:0005068!8.10e-23!52;UBERON:0006241!8.10e-23!52;UBERON:0007135!8.10e-23!52;UBERON:0000955!1.21e-21!50;UBERON:0006238!1.21e-21!50;UBERON:0003056!2.38e-21!49;UBERON:0002616!9.27e-21!49;UBERON:0003080!3.73e-16!40;UBERON:0002780!2.17e-15!39;UBERON:0001890!2.17e-15!39;UBERON:0006240!2.17e-15!39;UBERON:0007811!1.25e-13!86;UBERON:0000153!2.28e-13!94;UBERON:0002020!4.87e-13!34;UBERON:0002791!1.38e-09!29;UBERON:0003528!1.38e-09!29;UBERON:0001893!1.38e-09!29;UBERON:0002420!1.72e-07!8;UBERON:0007245!1.72e-07!8;UBERON:0010009!1.72e-07!8;UBERON:0010011!1.72e-07!8;UBERON:0000454!1.72e-07!8;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12;UBERON:0001894!2.61e-07!10;UBERON:0006222!2.61e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.90e-27,73;UBERON:0004121,9.58e-27,95;UBERON:0000924,9.58e-27,95;UBERON:0006601,9.58e-27,95;UBERON:0001016,4.13e-26,75;UBERON:0000073,4.88e-25,54;UBERON:0002346,9.51e-25,64;UBERON:0003075,9.51e-25,64;UBERON:0007284,9.51e-25,64;UBERON:0001049,1.75e-21,52;UBERON:0005068,1.75e-21,52;UBERON:0006241,1.75e-21,52;UBERON:0007135,1.75e-21,52;UBERON:0010371,8.14e-21,73;UBERON:0010314,1.70e-17,92;UBERON:0003056,1.06e-16,49;UBERON:0000955,9.29e-15,47;UBERON:0006238,9.29e-15,47;UBERON:0002420,1.02e-13,8;UBERON:0007245,1.02e-13,8;UBERON:0010009,1.02e-13,8;UBERON:0010011,1.02e-13,8;UBERON:0000454,1.02e-13,8;UBERON:0002616,2.30e-13,46;UBERON:0002240,5.32e-13,6;UBERON:0005174,5.32e-13,6;UBERON:0001137,5.32e-13,6;UBERON:0003080,2.11e-12,40;UBERON:0002020,7.23e-12,34;UBERON:0001948,3.32e-11,5;UBERON:0002315,3.32e-11,5;UBERON:0002780,3.85e-11,39;UBERON:0001890,3.85e-11,39;UBERON:0006240,3.85e-11,39;UBERON:0003076,6.95e-11,12;UBERON:0003057,6.95e-11,12;UBERON:0002950,3.81e-10,4;UBERON:0001891,3.81e-10,4;UBERON:0009616,3.81e-10,4;UBERON:0010286,3.81e-10,4;UBERON:0004684,2.39e-08,3;UBERON:0002275,2.39e-08,3;UBERON:0002038,3.87e-08,3;UBERON:0009663,3.87e-08,3;UBERON:0009661,3.87e-08,3;UBERON:0000125,3.87e-08,3;UBERON:0002308,3.87e-08,3;UBERON:0000369,1.89e-07,5;UBERON:0002435,1.89e-07,5;UBERON:0000204,1.89e-07,5;UBERON:0010082,1.89e-07,5;UBERON:0001894,3.85e-07,10;UBERON:0006222,3.85e-07,10;UBERON:0002257,5.43e-07,3
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0,2.30530983192933,0.622137673850866,0.405017814995072,0.420649922702764,3.71346279724945,2.87129103237098,0.61245399607477,0.287536413054709,0,3.30347642998166,7.53355294702608,4.91540906419979,2.2420668914133,2.28719109006024,3.12548022334056,3.35019598801657,4.50210088025344,3.66715794664344,1.76777151284201,2.56269025438385,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,1.03909497345377,0.520455980298408,0.913396434936424,0,1.05505848386836,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.84602214869163,2.28750301409313,0.628271760564322,3.30266208365325,1.27857728665165,6.2336413367868,2.59586020908412,0.203678727700633,0,0,0.210441855886474,2.21204753036596,0.919608417733892,1.26043490863744,1.20563854268572,1.15662048557257,0.512454881139399,0.562210347358373,2.06962696591213,0.646703978798527,0.567318240503458,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,0.720332286654991,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,2.69586879162067,0,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0,4.81981974632711,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,1.44048875225048,0.388076051348264,0.428674070063185,1.06404140185364,0.891844088010353,1.15184314421485,0.913394847343798,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0,0.453142408984205,0,0.726511433089237,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.320125762024346,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0.588795680537589,0,0.177475806159338,0.238436189947321,0,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0,0.409231043169689,0.464810523557898,0,0.499621155875892,0,0.429742108096597,0.191288332068843,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0,2.30530983192933,0.622137673850866,0.405017814995072,0.420649922702764,3.71346279724945,2.87129103237098,0.61245399607477,0.287536413054709,0,3.30347642998166,7.53355294702608,4.91540906419979,2.2420668914133,2.28719109006024,3.12548022334056,3.35019598801657,4.50210088025344,3.66715794664344,1.76777151284201,2.56269025438385,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,1.03909497345377,0.520455980298408,0.913396434936424,0,1.05505848386836,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.84602214869163,2.28750301409313,0.628271760564322,3.30266208365325,1.27857728665165,6.2336413367868,2.59586020908412,0.203678727700633,0,0,0.210441855886474,2.21204753036596,0.919608417733892,1.26043490863744,1.20563854268572,1.15662048557257,0.512454881139399,0.562210347358373,2.06962696591213,0.646703978798527,0.567318240503458,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,0.720332286654991,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,2.69586879162067,0,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0,4.81981974632711,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,1.44048875225048,0.388076051348264,0.428674070063185,1.06404140185364,0.891844088010353,1.15184314421485,0.913394847343798,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0,0.453142408984205,0,0.726511433089237,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.320125762024346,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0.588795680537589,0,0.177475806159338,0.238436189947321,0,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0,0.409231043169689,0.464810523557898,0,0.499621155875892,0,0.429742108096597,0.191288332068843,0,0.231867835620421
|short_description=p2@Necab2
}}
}}

Latest revision as of 14:52, 1 October 2015

Short description:p2@Necab2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Necab2_5end
Coexpression cluster:MCL_coexpression_mm9:1191
Association with transcript: 203bp_to_ENSMUST00000098363, NM_054095, uc009npq.1_5end
EntrezGene:Necab2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Necab2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.90e-2773
ectoderm-derived structure9.58e-2795
ectoderm9.58e-2795
presumptive ectoderm9.58e-2795
nervous system4.13e-2675
regional part of nervous system4.88e-2554
neurectoderm9.51e-2564
neural plate9.51e-2564
presumptive neural plate9.51e-2564
neural tube1.75e-2152
neural rod1.75e-2152
future spinal cord1.75e-2152
neural keel1.75e-2152
ecto-epithelium8.14e-2173
structure with developmental contribution from neural crest1.70e-1792
pre-chordal neural plate1.06e-1649
brain9.29e-1547
future brain9.29e-1547
basal ganglion1.02e-138
nuclear complex of neuraxis1.02e-138
aggregate regional part of brain1.02e-138
collection of basal ganglia1.02e-138
cerebral subcortex1.02e-138
regional part of brain2.30e-1346
spinal cord5.32e-136
dorsal region element5.32e-136
dorsum5.32e-136
anterior neural tube2.11e-1240
gray matter7.23e-1234
regional part of spinal cord3.32e-115
gray matter of spinal cord3.32e-115
regional part of forebrain3.85e-1139
forebrain3.85e-1139
future forebrain3.85e-1139
posterior neural tube6.95e-1112
chordal neural plate6.95e-1112
regional part of midbrain3.81e-104
midbrain3.81e-104
presumptive midbrain3.81e-104
midbrain neural tube3.81e-104
raphe nuclei2.39e-083
reticular formation2.39e-083
substantia nigra3.87e-083
telencephalic nucleus3.87e-083
midbrain nucleus3.87e-083
neural nucleus3.87e-083
nucleus of brain3.87e-083
corpus striatum1.89e-075
striatum1.89e-075
ventral part of telencephalon1.89e-075
future corpus striatum1.89e-075
diencephalon3.85e-0710
future diencephalon3.85e-0710
ventral horn of spinal cord5.43e-073
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