FFCP PHASE1:Mm9::chr8:120195160..120195171,-: Difference between revisions
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|id=chr8:120195160..120195171,-
|short_description=p6@Sdr42e1
|description=CAGE_peak_6_at_Sdr42e1_5end
|association_with_transcript=243bp_to_NM_028725,uc009npd.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74032 | |EntrezGene=74032 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D665 | |UniProt=Q9D665 | ||
|association_with_transcript=243bp_to_NM_028725,uc009npd.1_5end | |||
|cluster_id=chr8:120195160..120195171,- | |||
|description=CAGE_peak_6_at_Sdr42e1_5end | |||
|id=chr8:120195160..120195171,- | |||
|ontology_enrichment_celltype=CL:0000181!2.53e-08!5;CL:0000417!2.53e-08!5;CL:0000668!2.53e-08!5;CL:0000412!2.53e-08!5;CL:0000182!2.53e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.54e-21,5;CL:0000057,5.41e-08,1;CL:0000632,5.41e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!8.76e-12!5;UBERON:0001003!8.76e-12!5;UBERON:0002097!8.76e-12!5;UBERON:0002199!8.76e-12!5;UBERON:0007029!8.76e-12!5;UBERON:0007376!8.76e-12!5;UBERON:0002416!8.76e-12!5;UBERON:0007383!8.76e-12!5;UBERON:0002107!4.06e-11!22;UBERON:0007499!4.06e-11!22;UBERON:0006925!4.06e-11!22;UBERON:0009497!4.06e-11!22;UBERON:0000015!4.06e-11!22;UBERON:0002423!4.06e-11!22;UBERON:0006235!4.06e-11!22;UBERON:0008835!4.06e-11!22;UBERON:0003894!4.06e-11!22;UBERON:0004161!4.06e-11!22;UBERON:0008836!4.06e-11!22;UBERON:0009854!1.60e-10!23;UBERON:0009856!1.60e-10!23;UBERON:0002365!1.78e-09!25;UBERON:0002330!1.78e-09!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.08e-20,5;UBERON:0001003,5.08e-20,5;UBERON:0002097,5.08e-20,5;UBERON:0002199,5.08e-20,5;UBERON:0007029,5.08e-20,5;UBERON:0007376,5.08e-20,5;UBERON:0002416,5.08e-20,5;UBERON:0007383,5.08e-20,5;UBERON:0002107,3.60e-18,22;UBERON:0007499,3.60e-18,22;UBERON:0006925,3.60e-18,22;UBERON:0009497,3.60e-18,22;UBERON:0000015,3.60e-18,22;UBERON:0002423,3.60e-18,22;UBERON:0006235,3.60e-18,22;UBERON:0008835,3.60e-18,22;UBERON:0003894,3.60e-18,22;UBERON:0004161,3.60e-18,22;UBERON:0008836,3.60e-18,22;UBERON:0009854,2.38e-17,23;UBERON:0009856,2.38e-17,23;UBERON:0002365,6.64e-16,25;UBERON:0002330,6.64e-16,25;UBERON:0005256,1.74e-08,45;UBERON:0003914,4.33e-08,47;UBERON:0005172,1.00e-07,49;UBERON:0005173,1.00e-07,49;UBERON:0002417,1.00e-07,49;UBERON:0000916,1.00e-07,49;UBERON:0003102,6.03e-07,22;UBERON:0003929,8.65e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46466264679525,29.918738683141,8.09554787456726,5.84798775702902,3.13618820968135,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,2.77836765741823,5.9201146462231,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,1.48397627647332,0.645857706783622,2.0506394475573,3.81991500810037,2.62625439592098,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46466264679525,29.918738683141,8.09554787456726,5.84798775702902,3.13618820968135,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,2.77836765741823,5.9201146462231,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,1.48397627647332,0.645857706783622,2.0506394475573,3.81991500810037,2.62625439592098,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p6@Sdr42e1 | |||
}} | }} |
Latest revision as of 14:28, 1 October 2015
Short description: | p6@Sdr42e1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sdr42e1_5end |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | 243bp_to_NM_028725, uc009npd.1_5end |
EntrezGene: | Sdr42e1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.54e-21 | 5 |
fibroblast | 5.41e-08 | 1 |
hepatic stellate cell | 5.41e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 5.08e-20 | 5 |
skin epidermis | 5.08e-20 | 5 |
skin of body | 5.08e-20 | 5 |
integument | 5.08e-20 | 5 |
surface | 5.08e-20 | 5 |
outer epithelium | 5.08e-20 | 5 |
integumental system | 5.08e-20 | 5 |
enveloping layer of ectoderm | 5.08e-20 | 5 |
liver | 3.60e-18 | 22 |
epithelial sac | 3.60e-18 | 22 |
digestive gland | 3.60e-18 | 22 |
epithelium of foregut-midgut junction | 3.60e-18 | 22 |
anatomical boundary | 3.60e-18 | 22 |
hepatobiliary system | 3.60e-18 | 22 |
foregut-midgut junction | 3.60e-18 | 22 |
hepatic diverticulum | 3.60e-18 | 22 |
liver primordium | 3.60e-18 | 22 |
septum transversum | 3.60e-18 | 22 |
liver bud | 3.60e-18 | 22 |
digestive tract diverticulum | 2.38e-17 | 23 |
sac | 2.38e-17 | 23 |
exocrine gland | 6.64e-16 | 25 |
exocrine system | 6.64e-16 | 25 |
trunk mesenchyme | 1.74e-08 | 45 |
epithelial tube | 4.33e-08 | 47 |
abdomen element | 1.00e-07 | 49 |
abdominal segment element | 1.00e-07 | 49 |
abdominal segment of trunk | 1.00e-07 | 49 |
abdomen | 1.00e-07 | 49 |
surface structure | 6.03e-07 | 22 |
gut epithelium | 8.65e-07 | 55 |