Personal tools

FFCP PHASE1:Mm9::chr7:29747255..29747266,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr7:29747255..29747266,- |short_description=p2@Actn4 |description=CAGE_peak_2_at_Actn4_5end |association_with_transcript=-13bp_to_ENSMUST00000127210_5end |Ent...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:29747255..29747266,-
|DHSsupport=NA
|short_description=p2@Actn4
|DPIdataset=NA
|description=CAGE_peak_2_at_Actn4_5end
|association_with_transcript=-13bp_to_ENSMUST00000127210_5end
|EntrezGene=60595
|EntrezGene=60595
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=E9Q2W9
|UniProt=E9Q2W9
|association_with_transcript=-13bp_to_ENSMUST00000127210_5end
|cluster_id=chr7:29747255..29747266,-
|description=CAGE_peak_2_at_Actn4_5end
|id=chr7:29747255..29747266,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!8.50e-13!128;UBERON:0001555!8.50e-13!128;UBERON:0007026!8.50e-13!128;UBERON:0004119!9.41e-13!130;UBERON:0000925!9.41e-13!130;UBERON:0006595!9.41e-13!130;UBERON:0005409!1.11e-12!59;UBERON:0004921!5.91e-12!126;UBERON:0004185!5.91e-12!126;UBERON:0000160!2.84e-10!43;UBERON:0000344!8.34e-08!15;UBERON:0004923!5.42e-07!24;UBERON:0001242!7.33e-07!13;UBERON:0000060!7.33e-07!13;UBERON:0001262!7.33e-07!13;UBERON:0004786!7.33e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.94e-15,47;UBERON:0001007,1.68e-13,116;UBERON:0001555,1.68e-13,116;UBERON:0007026,1.68e-13,116;UBERON:0004119,1.97e-13,118;UBERON:0000925,1.97e-13,118;UBERON:0006595,1.97e-13,118;UBERON:0000160,2.43e-13,31;UBERON:0004921,1.25e-12,114;UBERON:0000344,8.34e-08,15;UBERON:0004923,5.42e-07,24;UBERON:0001242,7.33e-07,13;UBERON:0001262,7.33e-07,13;UBERON:0004786,7.33e-07,13
|phase1_expression=10.7299727560212,168.206146482172,146.054755844041,204.465806843417,157.281259203153,44.8237656004746,36.6771845734975,6.84353614240354,14.0788722151667,15.4482587372516,7.70480857014772,8.85470964848234,3.42401459862411,3.4968160967599,5.99597571268193,7.49158489342356,5.59649502502517,1.10411757875383,3.01651753932625,2.97072756258621,15.3928355173436,4.36880185283895,3.13439746966722,39.358136007178,40.8348520299563,111.975233002429,95.1984011511555,75.4149314400612,81.1400001078717,64.5197132185423,39.4680308966442,3.81018404075779,6.76571266343027,0,12.9983228888074,14.1299448554718,16.9460565697766,4.18531630736908,4.6880120671428,7.32933241563318,11.1763982725893,5.46436387966757,6.311634589405,28.8303713164072,30.5144562970739,31.2029478674859,7.82391344348039,36.8462514282955,46.573470739708,58.5233996213593,22.397827460058,34.5006154475932,3.02008690903925,9.42970784614748,9.07453257684653,67.4019722414181,55.8740207880576,61.8806510732931,1.82084814773638,3.1739458756322,1.90149421051854,27.1075625655306,19.5644855144451,11.2487464660175,5.93319817540185,17.0515227587064,12.583204641773,13.4476406862544,2.48855069540346,2.29510095163874,1.47227472945967,5.71301968807607,3.75476519617743,1.34739879136449,3.73797336971122,4.5960939330501,2.20231761998777,4.08599481872601,4.45458946443106,2.63772575460388,3.20206752608434,2.08365348222704,4.74611098302348,1.68828783009504,7.48711414106369,5.30331453852602,5.41012387036591,1.86399445825301,56.3402878398889,58.1901012822249,40.2911639295332,16.3480536626463,31.2786813505565,25.3660500069774,21.4426217757731,7.6164570806547,15.870219474888,41.0737077413119,24.1600984280668,24.3804306412135,13.661811718338,17.9657068380045,20.3844191765317,21.3320010945999,15.3708639117962,14.4415123320806,10.6160133453104,28.4317860500459,7.50919862576798,12.4691396814453,9.36820764537134,7.91610243611567,11.761390360059,11.9070886036572,9.17191915658498,16.9649898295062,45.2366790953904,43.3798070759735,18.5768215909474,12.4560474459505,12.1462835153216,7.27312879702833,20.5030937339934,4.39171195517321,2.72280718857492,55.1787239250557,3.71426885968353,2.99951365496704,3.68503658511888,2.84602214869163,5.94750783664214,1.50785222535437,3.30266208365325,3.83573185995496,4.1557608911912,2.75810147215188,10.8968119319838,11.3210343255185,7.07623723614289,21.4650693004203,5.20481771850815,5.0578462975364,7.20248519221397,10.2479276128286,7.55205140579739,6.91814089538189,6.55912071918102,13.9699820199068,8.40715172438085,7.94245536704841,9.85326295318113,11.1789823538063,11.1218899690239,17.0643561595862,23.8707278233214,5.9710280045548,5.61770549850588,5.66165395652373,6.81992398549422,15.7415587126981,11.9608290590359,13.3245925481151,15.3884078130387,17.5120166255189,14.3468414985262,17.672579801031,23.3397859217669,17.9818627245441,16.2914251414346,17.7300861205423,14.7545233373457,16.8129985539132,12.953456802172,12.2127841071938,3.99550902271842,2.26390147234426,145.384264512871,47.0722008661109,8.10495352033889,13.237490296045,15.206360436007,25.2104405779178,26.0182311298498,33.4797101958104,83.0425857702895,41.8335344998988,41.2189742432442,48.1474662339585,53.0302316964007,59.3220809711786,60.3025159150397,57.3526866972578,6.63837653335786,9.48262654660749,20.2873924211545,14.8665469327079,14.9343415119072,21.4615608864375,29.0888070771584,34.5407746272269,32.0277404796405,28.5047448659359,15.1190839814446,10.3443965543978,9.82794975566015,12.367416181167,14.2002084971952,13.5059209461353,15.2775511068852,17.2617682470486,16.0513874507285,12.3552635934637,25.8782771749238,18.9791883310937,23.7148631567066,16.6702059445094,18.8367284198008,18.8152973331713,25.6806934331581,8.52711352967181,13.3631280682461,8.14776411720903,13.3773441524446,18.2581820611579,28.8032805472077,34.928922966546,16.0787846988315,21.0391455166336,18.337298395611,20.1551877100358,25.0393223705549,20.6848153771562,4.52373851817817,1.63171705145613,29.5058563811422,31.7327258250442,4.97706828962155,4.45404409050372,11.3115112309906,12.876017287423,9.4652465824877,13.6653560503823,7.53981892064796,8.60287672629187,8.46634961513098,4.81230102341015,13.3587531552715,9.05993159525067,12.6492088942888,5.78378369559253,15.329529202493,11.2181330310371,10.5876523579824,16.1670720513085,6.63725691699814,11.4106898992841,9.67435382287203,8.29862350925952,12.4026795009925,16.2940628410282,24.550687850981,15.6319503675327,12.4774082434652,13.9056173491759,13.7044191147498,6.18813259489121,8.85142974959849,8.10274923140896,7.37344497561701,7.93047029616891,7.09360934569094,7.49149033928696,8.06290200950393,10.656273219011,12.6722722354404,13.1335883935569,11.9085334949679,41.0566769824285,20.50598219038,32.2674148365634,43.8096502491511,47.6008609260678,70.246881627794,5.56275906031529,9.91051108627546,17.1301100409475,16.2971184085346,13.3741604473331,14.0795054552656,13.7266903923914,6.79913719975421,6.29781535456461,5.8043988997858,38.1868247206045,13.6024477239888,13.419084830372,18.7929293029934,21.7451827855047,24.6749697033181,24.4104466956525,28.6807491366916,36.1223199937961,37.7179572279117,12.4267862617385,1.12738587736838,7.32631075615496,6.783798108741,7.97249872210595,9.5578269373521,4.22390313726945,7.27614879603675,7.94246747548096,4.50895181030557,2.89900944991207,2.88030006257865,4.4241556887945,8.5144590421869,5.95723551555998,5.71651621102298,9.84646826171148,9.53670502950071,7.09153152167816,7.67985541307802,6.46185279668145,6.78240579229499,6.45287584875779,5.84747284438514,5.00301576529713,6.19447581562315,21.3126560598299,14.6510729226883,11.2142320761845,18.6351924164127,32.455851797408,20.4573898241788,19.7803754208646,33.2270987572552,19.5613120573792,3.3885110557024,4.14292712856459,4.01026859407578,3.43706364687375,3.42541259885321,3.0215755895588,2.70009000092722,4.5032120322422,4.53142408984205,1.55328093525546,3.84013186061454,7.18244772121856,7.34154504742777,11.6691224192781,4.19226325255965,7.72142735490059,15.3350242183115,9.68364769022803,11.8740107548972,12.3821633764261,13.9413614939632,12.0720858487089,17.2300373744584,18.2471684353877,15.2203992732375,14.2888107384922,15.7602683285003,16.5901929598786,12.7746629249025,13.8366984926333,10.2860775715625,14.5530161050657,15.4983523465759,12.4997918303803,13.7399695406383,12.0152743206181,17.0123014771678,12.6273461490165,13.8520196122779,3.36685362994643,12.2194068667899,14.677167873959,13.0953933814301,15.6486209597826,13.3105561576988,13.989392364525,16.1412809827332,20.19787908054,17.2159498861959,17.6473135295612,16.2307484934295
|phase1_expression=10.7299727560212,168.206146482172,146.054755844041,204.465806843417,157.281259203153,44.8237656004746,36.6771845734975,6.84353614240354,14.0788722151667,15.4482587372516,7.70480857014772,8.85470964848234,3.42401459862411,3.4968160967599,5.99597571268193,7.49158489342356,5.59649502502517,1.10411757875383,3.01651753932625,2.97072756258621,15.3928355173436,4.36880185283895,3.13439746966722,39.358136007178,40.8348520299563,111.975233002429,95.1984011511555,75.4149314400612,81.1400001078717,64.5197132185423,39.4680308966442,3.81018404075779,6.76571266343027,0,12.9983228888074,14.1299448554718,16.9460565697766,4.18531630736908,4.6880120671428,7.32933241563318,11.1763982725893,5.46436387966757,6.311634589405,28.8303713164072,30.5144562970739,31.2029478674859,7.82391344348039,36.8462514282955,46.573470739708,58.5233996213593,22.397827460058,34.5006154475932,3.02008690903925,9.42970784614748,9.07453257684653,67.4019722414181,55.8740207880576,61.8806510732931,1.82084814773638,3.1739458756322,1.90149421051854,27.1075625655306,19.5644855144451,11.2487464660175,5.93319817540185,17.0515227587064,12.583204641773,13.4476406862544,2.48855069540346,2.29510095163874,1.47227472945967,5.71301968807607,3.75476519617743,1.34739879136449,3.73797336971122,4.5960939330501,2.20231761998777,4.08599481872601,4.45458946443106,2.63772575460388,3.20206752608434,2.08365348222704,4.74611098302348,1.68828783009504,7.48711414106369,5.30331453852602,5.41012387036591,1.86399445825301,56.3402878398889,58.1901012822249,40.2911639295332,16.3480536626463,31.2786813505565,25.3660500069774,21.4426217757731,7.6164570806547,15.870219474888,41.0737077413119,24.1600984280668,24.3804306412135,13.661811718338,17.9657068380045,20.3844191765317,21.3320010945999,15.3708639117962,14.4415123320806,10.6160133453104,28.4317860500459,7.50919862576798,12.4691396814453,9.36820764537134,7.91610243611567,11.761390360059,11.9070886036572,9.17191915658498,16.9649898295062,45.2366790953904,43.3798070759735,18.5768215909474,12.4560474459505,12.1462835153216,7.27312879702833,20.5030937339934,4.39171195517321,2.72280718857492,55.1787239250557,3.71426885968353,2.99951365496704,3.68503658511888,2.84602214869163,5.94750783664214,1.50785222535437,3.30266208365325,3.83573185995496,4.1557608911912,2.75810147215188,10.8968119319838,11.3210343255185,7.07623723614289,21.4650693004203,5.20481771850815,5.0578462975364,7.20248519221397,10.2479276128286,7.55205140579739,6.91814089538189,6.55912071918102,13.9699820199068,8.40715172438085,7.94245536704841,9.85326295318113,11.1789823538063,11.1218899690239,17.0643561595862,23.8707278233214,5.9710280045548,5.61770549850588,5.66165395652373,6.81992398549422,15.7415587126981,11.9608290590359,13.3245925481151,15.3884078130387,17.5120166255189,14.3468414985262,17.672579801031,23.3397859217669,17.9818627245441,16.2914251414346,17.7300861205423,14.7545233373457,16.8129985539132,12.953456802172,12.2127841071938,3.99550902271842,2.26390147234426,145.384264512871,47.0722008661109,8.10495352033889,13.237490296045,15.206360436007,25.2104405779178,26.0182311298498,33.4797101958104,83.0425857702895,41.8335344998988,41.2189742432442,48.1474662339585,53.0302316964007,59.3220809711786,60.3025159150397,57.3526866972578,6.63837653335786,9.48262654660749,20.2873924211545,14.8665469327079,14.9343415119072,21.4615608864375,29.0888070771584,34.5407746272269,32.0277404796405,28.5047448659359,15.1190839814446,10.3443965543978,9.82794975566015,12.367416181167,14.2002084971952,13.5059209461353,15.2775511068852,17.2617682470486,16.0513874507285,12.3552635934637,25.8782771749238,18.9791883310937,23.7148631567066,16.6702059445094,18.8367284198008,18.8152973331713,25.6806934331581,8.52711352967181,13.3631280682461,8.14776411720903,13.3773441524446,18.2581820611579,28.8032805472077,34.928922966546,16.0787846988315,21.0391455166336,18.337298395611,20.1551877100358,25.0393223705549,20.6848153771562,4.52373851817817,1.63171705145613,29.5058563811422,31.7327258250442,4.97706828962155,4.45404409050372,11.3115112309906,12.876017287423,9.4652465824877,13.6653560503823,7.53981892064796,8.60287672629187,8.46634961513098,4.81230102341015,13.3587531552715,9.05993159525067,12.6492088942888,5.78378369559253,15.329529202493,11.2181330310371,10.5876523579824,16.1670720513085,6.63725691699814,11.4106898992841,9.67435382287203,8.29862350925952,12.4026795009925,16.2940628410282,24.550687850981,15.6319503675327,12.4774082434652,13.9056173491759,13.7044191147498,6.18813259489121,8.85142974959849,8.10274923140896,7.37344497561701,7.93047029616891,7.09360934569094,7.49149033928696,8.06290200950393,10.656273219011,12.6722722354404,13.1335883935569,11.9085334949679,41.0566769824285,20.50598219038,32.2674148365634,43.8096502491511,47.6008609260678,70.246881627794,5.56275906031529,9.91051108627546,17.1301100409475,16.2971184085346,13.3741604473331,14.0795054552656,13.7266903923914,6.79913719975421,6.29781535456461,5.8043988997858,38.1868247206045,13.6024477239888,13.419084830372,18.7929293029934,21.7451827855047,24.6749697033181,24.4104466956525,28.6807491366916,36.1223199937961,37.7179572279117,12.4267862617385,1.12738587736838,7.32631075615496,6.783798108741,7.97249872210595,9.5578269373521,4.22390313726945,7.27614879603675,7.94246747548096,4.50895181030557,2.89900944991207,2.88030006257865,4.4241556887945,8.5144590421869,5.95723551555998,5.71651621102298,9.84646826171148,9.53670502950071,7.09153152167816,7.67985541307802,6.46185279668145,6.78240579229499,6.45287584875779,5.84747284438514,5.00301576529713,6.19447581562315,21.3126560598299,14.6510729226883,11.2142320761845,18.6351924164127,32.455851797408,20.4573898241788,19.7803754208646,33.2270987572552,19.5613120573792,3.3885110557024,4.14292712856459,4.01026859407578,3.43706364687375,3.42541259885321,3.0215755895588,2.70009000092722,4.5032120322422,4.53142408984205,1.55328093525546,3.84013186061454,7.18244772121856,7.34154504742777,11.6691224192781,4.19226325255965,7.72142735490059,15.3350242183115,9.68364769022803,11.8740107548972,12.3821633764261,13.9413614939632,12.0720858487089,17.2300373744584,18.2471684353877,15.2203992732375,14.2888107384922,15.7602683285003,16.5901929598786,12.7746629249025,13.8366984926333,10.2860775715625,14.5530161050657,15.4983523465759,12.4997918303803,13.7399695406383,12.0152743206181,17.0123014771678,12.6273461490165,13.8520196122779,3.36685362994643,12.2194068667899,14.677167873959,13.0953933814301,15.6486209597826,13.3105561576988,13.989392364525,16.1412809827332,20.19787908054,17.2159498861959,17.6473135295612,16.2307484934295
|short_description=p2@Actn4
}}
}}

Latest revision as of 13:31, 26 September 2015

Short description:p2@Actn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Actn4_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -13bp_to_ENSMUST00000127210_5end
EntrezGene:Actn4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Actn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5168.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6146.05
CD326+ enterocyte, pool1.CNhs13542.11848-124I3204.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I4157.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I744.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I836.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D139.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D240.83
GP2+ M cell, pool1.CNhs13228.11845-124H9111.98
GP2+ M cell, pool2.CNhs13231.11846-124I195.20
GP2+ M cell, pool3.CNhs13240.11847-124I275.41
Ileum epithelium, pool1.CNhs13199.10252-104B981.14
Ileum epithelium, pool2.CNhs13232.10253-104C164.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C839.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D828.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B331.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C236.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B846.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C358.52
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C167.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E155.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C561.88
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.11
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.05
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D956.34
Mouse Schwann, donor2.CNhs12573.11746-123F958.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.37
Mouse hepatocyte, donor6.CNhs13090.11822-124F421.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I824.38
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.43
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D712.47
adrenal gland, embryo E14.CNhs11038.406-44C59.37
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F511.91
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I316.96
amnion, adult pregnant day17.5.CNhs10488.583-22A845.24
aorta, adult.CNhs10498.46-23H143.38
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H755.18
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.32
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G421.47
eyeball, embryo E12.CNhs11016.345-16C65.20
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D410.25
eyeball, neonate N00.CNhs11207.633-15C67.55
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G86.56
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B523.87
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F511.96
heart, embryo E13.CNhs11013.376-3I913.32
heart, embryo E14.CNhs10597.403-26D415.39
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C614.35
heart, embryo E17.CNhs11025.479-18E517.67
heart, embryo E18.CNhs11030.1283-20G323.34
heart, neonate N00.CNhs11213.639-21E317.98
heart, neonate N03.CNhs11221.1349-25I216.29
heart, neonate N10.CNhs11118.749-24G117.73
heart, neonate N16.CNhs11209.782-15G114.75
heart, neonate N20.CNhs11127.821-26I616.81
heart, neonate N25.CNhs11196.1351-25D312.95
heart, neonate N30.CNhs11202.1390-42D212.21
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I3145.38
intestine, adult.CNhs10496.178-9A347.07
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D513.24
intestine, embryo E15.CNhs10602.976-16D815.21
intestine, embryo E16.CNhs10585.463-22H425.21
intestine, embryo E17.CNhs10582.482-18D326.02
intestine, embryo E18.CNhs10526.1289-20F733.48
intestine, neonate N00.CNhs11126.644-26D183.04
intestine, neonate N01.CNhs11192.1322-23E941.83
intestine, neonate N06.CNhs11102.688-20B841.22
intestine, neonate N07.CNhs11095.720-20F248.15
intestine, neonate N10.CNhs11098.755-23A553.03
intestine, neonate N20.CNhs11187.827-18D159.32
intestine, neonate N25.CNhs11121.1352-25E360.30
intestine, neonate N30.CNhs11131.1384-42G157.35
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I214.87
kidney, embryo E18.CNhs11001.1288-20C714.93
kidney, neonate N00.CNhs11214.646-21G721.46
kidney, neonate N10.CNhs11206.758-6D529.09
kidney, neonate N20.CNhs11113.832-19I134.54
kidney, neonate N25.CNhs11122.1353-25F332.03
kidney, neonate N30.CNhs11203.1385-42H128.50
liver, adult pregnant day01.CNhs10466.508-5B215.12
liver, embryo E12.CNhs10601.355-15F810.34
liver, embryo E13.CNhs10524.378-3H69.83
liver, embryo E14.CNhs10594.409-16E112.37
liver, embryo E15.CNhs10520.433-16D714.20
liver, embryo E16.CNhs10523.462-17F513.51
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G417.26
liver, neonate N00.CNhs11117.641-24F416.05
liver, neonate N03.CNhs11123.1345-25G212.36
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H218.98
liver, neonate N10.CNhs11115.751-24B923.71
liver, neonate N20.CNhs11220.823-25A316.67
liver, neonate N25.CNhs11198.1368-26H118.84
liver, neonate N30.CNhs11106.1382-42D118.82
lung, adult.CNhs10474.28-22B125.68
lung, embryo E12.CNhs10522.354-16G28.53
lung, embryo E14.CNhs10604.404-26F813.36
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A618.26
lung, embryo E18.CNhs10583.1287-20I628.80
lung, neonate N00.CNhs11224.640-42C634.93
lung, neonate N06.CNhs11212.683-20E516.08
lung, neonate N07.CNhs11111.715-19A321.04
lung, neonate N10.CNhs11219.750-23E618.34
lung, neonate N20.CNhs11109.822-18A420.16
lung, neonate N25.CNhs11119.1359-25C725.04
lung, neonate N30.CNhs11133.1394-42H220.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B629.51
mammary gland, adult pregnant day19.CNhs10476.588-5H231.73
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I715.33
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G616.17
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E58.30
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G924.55
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D812.48
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C77.37
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I712.67
placenta, adult pregnant day17.CNhs10464.577-18G313.13
prostate, adult.CNhs10470.859-1F811.91
skin, adult.CNhs10492.30-1C341.06
skin, neonate N00.CNhs11124.650-25G420.51
skin, neonate N03.CNhs11215.662-22H332.27
skin, neonate N06.CNhs11097.693-20I543.81
skin, neonate N10.CNhs11108.762-6C447.60
small intestine, neonate N16.CNhs11114.790-21I170.25
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G29.91
spleen, embryo E16.CNhs11035.461-43C117.13
spleen, embryo E18.CNhs11011.1271-21F216.30
spleen, neonate N10.CNhs11116.752-24D113.37
spleen, neonate N20.CNhs11112.824-19H114.08
spleen, neonate N25.CNhs11099.1354-25G313.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D418.79
stomach, embryo E17.CNhs11006.1035-18D521.75
stomach, embryo E18.CNhs10999.1286-20C624.67
stomach, neonate N03.CNhs11193.1340-24B824.41
stomach, neonate N07.CNhs11210.718-18A928.68
stomach, neonate N25.CNhs11104.1355-25E436.12
stomach, neonate N30.CNhs11134.1386-42I137.72
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G57.97
testis, embryo E17.CNhs11029.486-18I59.56
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B77.28
testis, neonate N07.CNhs11222.726-26I47.94
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I25.96
thymus, embryo E16.CNhs11002.456-26C55.72
thymus, embryo E17.CNhs10581.478-18C19.85
thymus, embryo E18.CNhs10595.1273-19G49.54
thymus, neonate N02.CNhs11181.1541-43F87.09
thymus, neonate N03.CNhs11137.2104-43C77.68
thymus, neonate N06.CNhs11197.681-26C46.46
thymus, neonate N07.CNhs11211.713-19D36.78
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G75.00
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B421.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.21
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.64
urinary bladder, adult.CNhs10481.879-12E432.46
uterus, adult pregnant day19.CNhs10497.590-15F520.46
uterus, adult.CNhs10509.92-27E519.78
vagina, adult.CNhs10502.89-27D533.23
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.65
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I513.99
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C220.20
whole body, neonate N01.CNhs10576.659-23C617.22
whole body, neonate N06.CNhs10515.692-21D117.65
whole body, neonate N10.CNhs10518.761-6B416.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system3.94e-1547
digestive system1.68e-13116
digestive tract1.68e-13116
primitive gut1.68e-13116
endoderm-derived structure1.97e-13118
endoderm1.97e-13118
presumptive endoderm1.97e-13118
intestine2.43e-1331
subdivision of digestive tract1.25e-12114
mucosa8.34e-0815
organ component layer5.42e-0724
intestinal mucosa7.33e-0713
wall of intestine7.33e-0713
gastrointestinal system mucosa7.33e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:29747255..29747266,-&oldid=4255863"