FFCP PHASE1:Mm9::chr7:26465861..26465880,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:26465861..26465880,+
|short_description=p2@B9d2
|description=CAGE_peak_2_at_B9d2_5end
|association_with_transcript=62bp_to_uc009fto.1_5end
|EntrezGene=232...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232987 | |EntrezGene=232987 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=433 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UK10 | |UniProt=Q3UK10 | ||
|association_with_transcript=62bp_to_uc009fto.1_5end | |||
|cluster_id=chr7:26465861..26465880,+ | |||
|description=CAGE_peak_2_at_B9d2_5end | |||
|id=chr7:26465861..26465880,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.73e-13!32;CL:0002032!6.73e-13!32;CL:0000037!6.73e-13!32;CL:0000566!6.73e-13!32;CL:0000837!6.73e-13!32;CL:0002320!2.18e-10!46;CL:0000134!2.18e-10!46;CL:0000219!2.40e-10!54;CL:0002031!3.23e-09!25;CL:0000723!2.75e-08!91;CL:0000048!2.75e-08!91;CL:0000034!3.08e-08!97;CL:0000049!4.62e-08!19;CL:0000738!5.97e-07!17;CL:0002087!5.97e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.51e-14,32;CL:0002032,3.51e-14,32;CL:0000037,3.51e-14,32;CL:0000837,3.51e-14,32;CL:0000219,5.00e-13,54;CL:0002320,5.88e-13,46;CL:0000134,5.88e-13,46;CL:0000034,1.07e-10,97;CL:0000723,4.63e-10,91;CL:0000048,4.63e-10,91;CL:0002031,7.43e-10,25;CL:0000049,2.70e-09,19;CL:0000763,4.16e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.70e-15!45;UBERON:0003061!4.70e-15!45;UBERON:0002193!5.85e-14!48;UBERON:0002384!2.18e-10!46;UBERON:0007811!3.89e-10!86;UBERON:0002405!1.56e-09!70;UBERON:0004177!5.60e-09!29;UBERON:0000153!2.15e-08!94;UBERON:0003408!8.33e-08!24;UBERON:0001474!1.22e-07!22;UBERON:0004765!1.22e-07!22;UBERON:0001434!1.22e-07!22;UBERON:0002370!1.30e-07!23;UBERON:0000974!1.30e-07!23;UBERON:0004807!1.30e-07!23;UBERON:0005058!1.30e-07!23;UBERON:0003351!1.30e-07!23;UBERON:0009113!1.30e-07!23;UBERON:0003295!1.30e-07!23;UBERON:0009722!1.30e-07!23;UBERON:0005562!1.30e-07!23;UBERON:0007690!1.30e-07!23;UBERON:0002371!4.28e-07!16;UBERON:0006562!7.79e-07!24;UBERON:0001557!7.79e-07!24;UBERON:0001042!7.79e-07!24;UBERON:0008814!7.79e-07!24;UBERON:0009145!7.79e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.73e-17,45;UBERON:0003061,2.73e-17,45;UBERON:0002193,4.48e-15,48;UBERON:0002405,4.48e-15,48;UBERON:0002384,5.88e-13,46;UBERON:0004177,1.56e-10,29;UBERON:0005057,1.56e-10,29;UBERON:0003408,3.93e-09,24;UBERON:0002370,6.66e-09,23;UBERON:0000974,6.66e-09,23;UBERON:0004807,6.66e-09,23;UBERON:0005058,6.66e-09,23;UBERON:0003351,6.66e-09,23;UBERON:0009113,6.66e-09,23;UBERON:0003295,6.66e-09,23;UBERON:0009722,6.66e-09,23;UBERON:0005562,6.66e-09,23;UBERON:0007690,6.66e-09,23;UBERON:0006562,3.50e-08,24;UBERON:0001557,3.50e-08,24;UBERON:0001042,3.50e-08,24;UBERON:0008814,3.50e-08,24;UBERON:0009145,3.50e-08,24;UBERON:0007811,4.28e-08,36;UBERON:0002368,9.30e-08,60;UBERON:0002371,1.19e-07,16;UBERON:0001474,1.42e-07,22;UBERON:0004765,1.42e-07,22;UBERON:0001434,1.42e-07,22;UBERON:0000077,1.73e-07,35;UBERON:0000072,7.62e-07,27 | |||
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| ||
|short_description=p2@B9d2 | |||
}} | }} |
Latest revision as of 10:51, 26 September 2015
Short description: | p2@B9d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B9d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:433 |
Association with transcript: | 62bp_to_uc009fto.1_5end |
EntrezGene: | B9d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.51e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.51e-14 | 32 |
hematopoietic stem cell | 3.51e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.51e-14 | 32 |
motile cell | 5.00e-13 | 54 |
connective tissue cell | 5.88e-13 | 46 |
mesenchymal cell | 5.88e-13 | 46 |
stem cell | 1.07e-10 | 97 |
somatic stem cell | 4.63e-10 | 91 |
multi fate stem cell | 4.63e-10 | 91 |
hematopoietic lineage restricted progenitor cell | 7.43e-10 | 25 |
common myeloid progenitor | 2.70e-09 | 19 |
myeloid cell | 4.16e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.73e-17 | 45 |
blood island | 2.73e-17 | 45 |
hemolymphoid system | 4.48e-15 | 48 |
immune system | 4.48e-15 | 48 |
connective tissue | 5.88e-13 | 46 |
hemopoietic organ | 1.56e-10 | 29 |
immune organ | 1.56e-10 | 29 |
gland of gut | 3.93e-09 | 24 |
thymus | 6.66e-09 | 23 |
neck | 6.66e-09 | 23 |
respiratory system epithelium | 6.66e-09 | 23 |
hemolymphoid system gland | 6.66e-09 | 23 |
pharyngeal epithelium | 6.66e-09 | 23 |
thymic region | 6.66e-09 | 23 |
pharyngeal gland | 6.66e-09 | 23 |
entire pharyngeal arch endoderm | 6.66e-09 | 23 |
thymus primordium | 6.66e-09 | 23 |
early pharyngeal endoderm | 6.66e-09 | 23 |
pharynx | 3.50e-08 | 24 |
upper respiratory tract | 3.50e-08 | 24 |
chordate pharynx | 3.50e-08 | 24 |
pharyngeal arch system | 3.50e-08 | 24 |
pharyngeal region of foregut | 3.50e-08 | 24 |
craniocervical region | 4.28e-08 | 36 |
endocrine gland | 9.30e-08 | 60 |
bone marrow | 1.19e-07 | 16 |
bone element | 1.42e-07 | 22 |
skeletal element | 1.42e-07 | 22 |
skeletal system | 1.42e-07 | 22 |
mixed endoderm/mesoderm-derived structure | 1.73e-07 | 35 |
segment of respiratory tract | 7.62e-07 | 27 |