FFCP PHASE1:Mm9::chr7:150899491..150899518,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:150899491..150899518,-
|short_description=p@chr7:150899491..150899518,-
|description=CAGE_peak_at_chr7:150899491..150899518,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:150899491..150899518,- | |||
|description=CAGE_peak_at_chr7:150899491..150899518,- | |||
|id=chr7:150899491..150899518,- | |||
|ontology_enrichment_celltype=CL:0000988!3.15e-09!32;CL:0002032!3.15e-09!32;CL:0000037!3.15e-09!32;CL:0000566!3.15e-09!32;CL:0000837!3.15e-09!32;CL:0000542!6.63e-07!13;CL:0000051!6.63e-07!13;CL:0000838!8.62e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.25e-24,25;CL:0000988,7.63e-22,32;CL:0002032,7.63e-22,32;CL:0000037,7.63e-22,32;CL:0000837,7.63e-22,32;CL:0000838,3.76e-20,12;CL:0000542,1.61e-18,13;CL:0000051,1.61e-18,13;CL:0000084,3.87e-17,11;CL:0000827,3.87e-17,11;CL:0000553,1.51e-16,6;CL:0000556,1.51e-16,6;CL:0002320,1.99e-14,46;CL:0000134,1.99e-14,46;CL:0000738,6.64e-14,17;CL:0002087,6.64e-14,17;CL:0000219,6.50e-12,54;CL:0000050,5.74e-11,9;CL:0000791,1.07e-10,9;CL:0000789,1.07e-10,9;CL:0002420,1.07e-10,9;CL:0002419,1.07e-10,9;CL:0000790,1.07e-10,9;CL:0000624,7.28e-08,8;CL:0000839,1.61e-07,13;CL:0000049,4.97e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.15e-13!48;UBERON:0002390!9.98e-12!45;UBERON:0003061!9.98e-12!45;UBERON:0004177!9.52e-11!29;UBERON:0002405!1.23e-09!70;UBERON:0001041!4.04e-09!92;UBERON:0000077!1.09e-08!97;UBERON:0004119!9.94e-08!130;UBERON:0000925!9.94e-08!130;UBERON:0006595!9.94e-08!130;UBERON:0003408!1.78e-07!24;UBERON:0001004!2.21e-07!42;UBERON:0001007!2.40e-07!128;UBERON:0001555!2.40e-07!128;UBERON:0007026!2.40e-07!128;UBERON:0003081!2.73e-07!88;UBERON:0000065!7.92e-07!41;UBERON:0002370!8.03e-07!23;UBERON:0000974!8.03e-07!23;UBERON:0004807!8.03e-07!23;UBERON:0005058!8.03e-07!23;UBERON:0003351!8.03e-07!23;UBERON:0009113!8.03e-07!23;UBERON:0003295!8.03e-07!23;UBERON:0009722!8.03e-07!23;UBERON:0005562!8.03e-07!23;UBERON:0007690!8.03e-07!23;UBERON:0004921!8.31e-07!126;UBERON:0004185!8.31e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.17e-15,6;UBERON:0004457,1.17e-15,6;UBERON:0000042,1.17e-15,6;UBERON:0004854,1.17e-15,6;UBERON:0009034,1.17e-15,6;UBERON:0002095,1.17e-15,6;UBERON:0004782,1.17e-15,6;UBERON:0003281,1.17e-15,6;UBERON:0009664,1.17e-15,6;UBERON:0002296,1.17e-15,6;UBERON:0005602,1.17e-15,6;UBERON:0001179,1.17e-15,6;UBERON:0006293,1.17e-15,6;UBERON:0002384,1.99e-14,46;UBERON:0002193,2.30e-13,48;UBERON:0002405,2.30e-13,48;UBERON:0002390,3.32e-12,45;UBERON:0003061,3.32e-12,45;UBERON:0003887,2.49e-09,10;UBERON:0004177,2.78e-07,29;UBERON:0005057,2.78e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.563154888606667,0,0.513653904676515,0,3.25281386869291,1.57356724354195,1.33243904726265,1.61980213911861,0.699561878128147,7.25562980323947,6.99283611389268,3.81950686618227,0.0850432901510698,14.9929336313337,9.66439219814061,0.639969691173627,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.34226084846189,2.17608642603403,5.04140698713696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,0.29688427812965,0,0.304465478312141,0,0,0,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,1.79970819298022,0.762421362438388,0,0,0,0,0,0,0,0,0.746441823660558,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0.667380422864376,0.393117990226406,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,2.95605104266567,0,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0,0,0,0,4.27177201994632,1.23832120777933,2.03713980106683,1.13021074202815,1.77702496037333,0.686334519619568,0.849892149969277,0.839708713941948,0.829199842826543,0.954670618015114,0,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.259229946583586,1.86401793926078,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0.632022241256357,0.608175645870493,1.23253148597793,0.51968329191118,0.895133478337407,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.457240839929999,0.100826185136841,0.194915761479505,0.577271049841977,0.701261413089414,0,0,0,0,0,0.563047426353546,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.187283014939765,0.256100609619477,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.382576664137687,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.563154888606667,0,0.513653904676515,0,3.25281386869291,1.57356724354195,1.33243904726265,1.61980213911861,0.699561878128147,7.25562980323947,6.99283611389268,3.81950686618227,0.0850432901510698,14.9929336313337,9.66439219814061,0.639969691173627,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.34226084846189,2.17608642603403,5.04140698713696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,0.29688427812965,0,0.304465478312141,0,0,0,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,1.79970819298022,0.762421362438388,0,0,0,0,0,0,0,0,0.746441823660558,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0.667380422864376,0.393117990226406,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,2.95605104266567,0,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0,0,0,0,4.27177201994632,1.23832120777933,2.03713980106683,1.13021074202815,1.77702496037333,0.686334519619568,0.849892149969277,0.839708713941948,0.829199842826543,0.954670618015114,0,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.259229946583586,1.86401793926078,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0.632022241256357,0.608175645870493,1.23253148597793,0.51968329191118,0.895133478337407,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.457240839929999,0.100826185136841,0.194915761479505,0.577271049841977,0.701261413089414,0,0,0,0,0,0.563047426353546,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.187283014939765,0.256100609619477,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.382576664137687,0,0.463735671240843 | ||
|short_description=p@chr7:150899491..150899518,- | |||
}} | }} |
Latest revision as of 15:19, 4 August 2015
Short description: | p@chr7:150899491..150899518, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:150899491..150899518, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.25e-24 | 25 |
hematopoietic cell | 7.63e-22 | 32 |
hematopoietic oligopotent progenitor cell | 7.63e-22 | 32 |
hematopoietic stem cell | 7.63e-22 | 32 |
hematopoietic multipotent progenitor cell | 7.63e-22 | 32 |
lymphoid lineage restricted progenitor cell | 3.76e-20 | 12 |
lymphocyte | 1.61e-18 | 13 |
common lymphoid progenitor | 1.61e-18 | 13 |
T cell | 3.87e-17 | 11 |
pro-T cell | 3.87e-17 | 11 |
megakaryocyte progenitor cell | 1.51e-16 | 6 |
megakaryocyte | 1.51e-16 | 6 |
connective tissue cell | 1.99e-14 | 46 |
mesenchymal cell | 1.99e-14 | 46 |
leukocyte | 6.64e-14 | 17 |
nongranular leukocyte | 6.64e-14 | 17 |
motile cell | 6.50e-12 | 54 |
megakaryocyte-erythroid progenitor cell | 5.74e-11 | 9 |
mature alpha-beta T cell | 1.07e-10 | 9 |
alpha-beta T cell | 1.07e-10 | 9 |
immature T cell | 1.07e-10 | 9 |
mature T cell | 1.07e-10 | 9 |
immature alpha-beta T cell | 1.07e-10 | 9 |
CD4-positive, alpha-beta T cell | 7.28e-08 | 8 |
myeloid lineage restricted progenitor cell | 1.61e-07 | 13 |
common myeloid progenitor | 4.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.17e-15 | 6 |
cavity lining | 1.17e-15 | 6 |
serous membrane | 1.17e-15 | 6 |
gastrointestinal system mesentery | 1.17e-15 | 6 |
stomach region | 1.17e-15 | 6 |
mesentery | 1.17e-15 | 6 |
gastrointestinal system serosa | 1.17e-15 | 6 |
mesentery of stomach | 1.17e-15 | 6 |
gut mesentery | 1.17e-15 | 6 |
dorsal mesentery | 1.17e-15 | 6 |
dorsal mesogastrium | 1.17e-15 | 6 |
peritoneal cavity | 1.17e-15 | 6 |
spleen primordium | 1.17e-15 | 6 |
connective tissue | 1.99e-14 | 46 |
hemolymphoid system | 2.30e-13 | 48 |
immune system | 2.30e-13 | 48 |
hematopoietic system | 3.32e-12 | 45 |
blood island | 3.32e-12 | 45 |
intraembryonic coelom | 2.49e-09 | 10 |
hemopoietic organ | 2.78e-07 | 29 |
immune organ | 2.78e-07 | 29 |